RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 HS6ST3Q8IZP7 471 aa11.4□□□□□ -0.58
SCARB2-206ENST00000638175 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
SCARB2-206ENST00000638175 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
SCARB2-206ENST00000638175 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-206ENST00000638175 CHGAP10645 457 aaKnown RBP11.37□□□□□ -0.59
SCARB2-206ENST00000638175 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
SCARB2-206ENST00000638175 C3orf67Q6ZVT6 689 aa11.36□□□□□ -0.59
SCARB2-206ENST00000638175 EFCAB3Q8N7B9 438 aa11.36□□□□□ -0.59
SCARB2-206ENST00000638175 RSF1Q96T23 1441 aaPredicted RBP11.35□□□□□ -0.59
SCARB2-206ENST00000638175 PCDH10Q9P2E7 1040 aa11.35□□□□□ -0.59
SCARB2-206ENST00000638175 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
SCARB2-206ENST00000638175 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-206ENST00000638175 ZFP91Q96JP5 570 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-206ENST00000638175 TOP2AP11388 1531 aaKnown RBP11.31□□□□□ -0.6
SCARB2-206ENST00000638175 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
SCARB2-206ENST00000638175 SNPHO15079 494 aa11.29□□□□□ -0.6
SCARB2-206ENST00000638175 HAP1P54257 671 aaPredicted RBP11.28□□□□□ -0.6
SCARB2-206ENST00000638175 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
SCARB2-206ENST00000638175 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
SCARB2-206ENST00000638175 SPRYD3Q8NCJ5 442 aa11.26□□□□□ -0.61
SCARB2-206ENST00000638175 G3V3G9 751 aa11.24□□□□□ -0.61
SCARB2-206ENST00000638175 TMEM121BQ9BXQ6 578 aaPredicted RBP11.24□□□□□ -0.61
SCARB2-206ENST00000638175 STK25O00506 426 aa11.23□□□□□ -0.61
SCARB2-206ENST00000638175 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
SCARB2-206ENST00000638175 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
SCARB2-206ENST00000638175 PRDM2Q13029 1718 aa11.23□□□□□ -0.61
SCARB2-206ENST00000638175 SOX12O15370 315 aa11.22□□□□□ -0.61
SCARB2-206ENST00000638175 MS4A4AQ96JQ5 239 aa11.22□□□□□ -0.61
SCARB2-206ENST00000638175 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
SCARB2-206ENST00000638175 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
SCARB2-206ENST00000638175 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
SCARB2-206ENST00000638175 VSIG10Q8N0Z9 540 aa11.2□□□□□ -0.62
SCARB2-206ENST00000638175 BCL11BQ9C0K0 894 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-206ENST00000638175 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
SCARB2-206ENST00000638175 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-206ENST00000638175 STK24Q9Y6E0 443 aa11.16□□□□□ -0.62
SCARB2-206ENST00000638175 TMEM92Q6UXU6 159 aa11.15□□□□□ -0.62
SCARB2-206ENST00000638175 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
SCARB2-206ENST00000638175 FBXO22Q8NEZ5 403 aa11.12□□□□□ -0.63
SCARB2-206ENST00000638175 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
SCARB2-206ENST00000638175 EMP3P54852 163 aa11.11□□□□□ -0.63
SCARB2-206ENST00000638175 NLRP6P59044 892 aa11.11□□□□□ -0.63
SCARB2-206ENST00000638175 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
SCARB2-206ENST00000638175 KIF21AQ7Z4S6 1674 aa11.11□□□□□ -0.63
SCARB2-206ENST00000638175 NESP48681 1621 aa11.1□□□□□ -0.63
SCARB2-206ENST00000638175 MFRPQ9BY79 579 aa11.1□□□□□ -0.63
SCARB2-206ENST00000638175 TSHZ2Q9NRE2 1034 aa11.1□□□□□ -0.63
SCARB2-206ENST00000638175 CCDC88BA6NC98 1476 aa11.09□□□□□ -0.63
SCARB2-206ENST00000638175 RYDENQ9NUL5 291 aaKnown RBP11.09□□□□□ -0.63
SCARB2-206ENST00000638175 CADPSQ9ULU8 1353 aa11.08□□□□□ -0.64
SCARB2-206ENST00000638175 KDM2AQ9Y2K7 1162 aa11.08□□□□□ -0.64
SCARB2-206ENST00000638175 CFTRP13569 1480 aa11.07□□□□□ -0.64
SCARB2-206ENST00000638175 FAM205CA6NFA0 338 aa11.06□□□□□ -0.64
SCARB2-206ENST00000638175 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
SCARB2-206ENST00000638175 HS3ST6Q96QI5 342 aa11.05□□□□□ -0.64
SCARB2-206ENST00000638175 ERCC6Q03468 1493 aa11.05□□□□□ -0.64
SCARB2-206ENST00000638175 PDS5BQ9NTI5 1447 aa11.04□□□□□ -0.64
SCARB2-206ENST00000638175 SUPT5HO00267 1087 aaKnown RBP11.04□□□□□ -0.64
SCARB2-206ENST00000638175 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
SCARB2-206ENST00000638175 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
SCARB2-206ENST00000638175 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
SCARB2-206ENST00000638175 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
SCARB2-206ENST00000638175 KRTAP3-3Q9BYR6 98 aa10.99□□□□□ -0.65
SCARB2-206ENST00000638175 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
SCARB2-206ENST00000638175 CEP164Q9UPV0 1460 aa10.99□□□□□ -0.65
SCARB2-206ENST00000638175 FANCD2Q9BXW9 1451 aa10.98□□□□□ -0.65
SCARB2-206ENST00000638175 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
SCARB2-206ENST00000638175 CUX2O14529 1486 aa10.95□□□□□ -0.66
SCARB2-206ENST00000638175 GPR153Q6NV75 609 aa10.95□□□□□ -0.66
SCARB2-206ENST00000638175 WDR62O43379 1518 aa10.94□□□□□ -0.66
SCARB2-206ENST00000638175 MRC2Q9UBG0 1479 aa10.94□□□□□ -0.66
SCARB2-206ENST00000638175 ERBB3P21860 1342 aa10.94□□□□□ -0.66
SCARB2-206ENST00000638175 MMRN1Q13201 1228 aa10.94□□□□□ -0.66
SCARB2-206ENST00000638175 PPP1R37O75864 691 aa10.93□□□□□ -0.66
SCARB2-206ENST00000638175 KIF3CO14782 793 aa10.92□□□□□ -0.66
SCARB2-206ENST00000638175 ZSWIM6Q9HCJ5 1215 aa10.92□□□□□ -0.66
SCARB2-206ENST00000638175 C2orf72A6NCS6 295 aa10.91□□□□□ -0.66
SCARB2-206ENST00000638175 ARSIQ5FYB1 569 aa10.9□□□□□ -0.66
SCARB2-206ENST00000638175 BCANQ96GW7 911 aa10.9□□□□□ -0.66
SCARB2-206ENST00000638175 VARS2Q5ST30 1063 aaKnown RBP10.89□□□□□ -0.67
SCARB2-206ENST00000638175 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
SCARB2-206ENST00000638175 DNMBPQ6XZF7 1577 aa10.88□□□□□ -0.67
SCARB2-206ENST00000638175 KHSRPQ92945 711 aaKnown RBP eCLIP10.88□□□□□ -0.67
SCARB2-206ENST00000638175 URB2Q14146 1524 aaKnown RBP10.86□□□□□ -0.67
SCARB2-206ENST00000638175 TOPBP1Q92547 1522 aa10.84□□□□□ -0.67
SCARB2-206ENST00000638175 BIVM-ERCC5R4GMW8 1640 aa10.82□□□□□ -0.68
SCARB2-206ENST00000638175 CADPS2Q86UW7 1296 aa10.81□□□□□ -0.68
SCARB2-206ENST00000638175 TMC2Q8TDI7 906 aa10.81□□□□□ -0.68
SCARB2-206ENST00000638175 ZNF687Q8N1G0 1237 aa10.8□□□□□ -0.68
SCARB2-206ENST00000638175 TOP2BQ02880 1626 aa10.78□□□□□ -0.68
SCARB2-206ENST00000638175 CUX1P39880 1505 aa10.78□□□□□ -0.68
SCARB2-206ENST00000638175 ZNF316A6NFI3 1004 aaPredicted RBP10.77□□□□□ -0.69
SCARB2-206ENST00000638175 SLC34A2O95436 690 aa10.77□□□□□ -0.69
SCARB2-206ENST00000638175 WDR97A6NE52 1622 aa10.76□□□□□ -0.69
SCARB2-206ENST00000638175 NUDT7P0C024 238 aa10.76□□□□□ -0.69
SCARB2-206ENST00000638175 PCDHGA4Q9Y5G9 962 aa10.76□□□□□ -0.69
SCARB2-206ENST00000638175 TARBP1Q13395 1621 aaKnown RBP10.76□□□□□ -0.69
SCARB2-206ENST00000638175 SYNJ1O43426 1573 aa10.75□□□□□ -0.69
SCARB2-206ENST00000638175 POLA1P09884 1462 aaPredicted RBP10.74□□□□□ -0.69
SCARB2-206ENST00000638175 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms