RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 ABCC5O15440 1437 aa18.06■□□□□ 0.48
CACNA1D-228ENST00000638120 ZNF644Q9H582 1327 aaPredicted RBP18.05■□□□□ 0.48
CACNA1D-228ENST00000638120 PREX2Q70Z35 1606 aa18.04■□□□□ 0.48
CACNA1D-228ENST00000638120 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
CACNA1D-228ENST00000638120 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
CACNA1D-228ENST00000638120 ROCK1Q13464 1354 aa18.04■□□□□ 0.48
CACNA1D-228ENST00000638120 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
CACNA1D-228ENST00000638120 CHIC2Q9UKJ5 165 aa18■□□□□ 0.47
CACNA1D-228ENST00000638120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18■□□□□ 0.47
CACNA1D-228ENST00000638120 ADGBQ8N7X0 1667 aa18■□□□□ 0.47
CACNA1D-228ENST00000638120 CDC42BPBQ9Y5S2 1711 aa18■□□□□ 0.47
CACNA1D-228ENST00000638120 RRP7BPQ9NSQ0 103 aa17.99■□□□□ 0.47
CACNA1D-228ENST00000638120 KDM6BO15054 1643 aa17.97■□□□□ 0.47
CACNA1D-228ENST00000638120 ADGRL2O95490 1459 aa17.97■□□□□ 0.47
CACNA1D-228ENST00000638120 MYO5CQ9NQX4 1742 aa17.96■□□□□ 0.47
CACNA1D-228ENST00000638120 SHANK2Q9UPX8 1470 aa17.96■□□□□ 0.47
CACNA1D-228ENST00000638120 SAMD9LQ8IVG5 1584 aa17.96■□□□□ 0.47
CACNA1D-228ENST00000638120 ZNF777Q9ULD5 760 aaPredicted RBP17.95■□□□□ 0.46
CACNA1D-228ENST00000638120 ARHGEF5Q12774 1597 aa17.95■□□□□ 0.46
CACNA1D-228ENST00000638120 NCOA1Q15788 1441 aa17.92■□□□□ 0.46
CACNA1D-228ENST00000638120 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
CACNA1D-228ENST00000638120 MBD5Q9P267 1494 aa17.91■□□□□ 0.46
CACNA1D-228ENST00000638120 ACIN1Q9UKV3 1341 aaKnown RBP17.9■□□□□ 0.46
CACNA1D-228ENST00000638120 WDR7Q9Y4E6 1490 aa17.89■□□□□ 0.45
CACNA1D-228ENST00000638120 C9orf84Q5VXU9 1444 aa17.88■□□□□ 0.45
CACNA1D-228ENST00000638120 CCDC141Q6ZP82 1450 aa17.88■□□□□ 0.45
CACNA1D-228ENST00000638120 ANKRD30AQ9BXX3 1397 aa17.88■□□□□ 0.45
CACNA1D-228ENST00000638120 PLCH2O75038 1416 aa17.87■□□□□ 0.45
CACNA1D-228ENST00000638120 PLEKHH2Q8IVE3 1493 aa17.86■□□□□ 0.45
CACNA1D-228ENST00000638120 SYCP2Q9BX26 1530 aa17.86■□□□□ 0.45
CACNA1D-228ENST00000638120 DENND4BO75064 1496 aaPredicted RBP17.86■□□□□ 0.45
CACNA1D-228ENST00000638120 KCNH8Q96L42 1107 aa17.86■□□□□ 0.45
CACNA1D-228ENST00000638120 ARAP3Q8WWN8 1544 aa17.85■□□□□ 0.45
CACNA1D-228ENST00000638120 KIAA1107Q9UPP5 1409 aa17.84■□□□□ 0.45
CACNA1D-228ENST00000638120 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.45
CACNA1D-228ENST00000638120 SIN3AQ96ST3 1273 aa17.83■□□□□ 0.44
CACNA1D-228ENST00000638120 ABCA9Q8IUA7 1624 aa17.83■□□□□ 0.44
CACNA1D-228ENST00000638120 ZNF316A6NFI3 1004 aaPredicted RBP17.82■□□□□ 0.44
CACNA1D-228ENST00000638120 HNRNPMP52272 730 aaKnown RBP eCLIP17.82■□□□□ 0.44
CACNA1D-228ENST00000638120 RSPH4AQ5TD94 716 aa17.82■□□□□ 0.44
CACNA1D-228ENST00000638120 TIMELESSQ9UNS1 1208 aa17.82■□□□□ 0.44
CACNA1D-228ENST00000638120 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
CACNA1D-228ENST00000638120 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
CACNA1D-228ENST00000638120 TSPY4P0CV99 314 aa17.81■□□□□ 0.44
CACNA1D-228ENST00000638120 TSPY10P0CW01 314 aa17.81■□□□□ 0.44
CACNA1D-228ENST00000638120 ABCC1P33527 1531 aa17.8■□□□□ 0.44
CACNA1D-228ENST00000638120 ANKRD50Q9ULJ7 1429 aa17.8■□□□□ 0.44
CACNA1D-228ENST00000638120 NEUROD1Q13562 356 aa17.79■□□□□ 0.44
CACNA1D-228ENST00000638120 MPHOSPH9Q99550 1183 aa17.78■□□□□ 0.44
CACNA1D-228ENST00000638120 ARHGEF12Q9NZN5 1544 aa17.77■□□□□ 0.44
CACNA1D-228ENST00000638120 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
CACNA1D-228ENST00000638120 KIF15Q9NS87 1388 aa17.77■□□□□ 0.44
CACNA1D-228ENST00000638120 EFCAB2Q5VUJ9 269 aa17.77■□□□□ 0.43
CACNA1D-228ENST00000638120 PLXNC1O60486 1568 aa17.76■□□□□ 0.43
CACNA1D-228ENST00000638120 PZPP20742 1482 aa17.76■□□□□ 0.43
CACNA1D-228ENST00000638120 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
CACNA1D-228ENST00000638120 KDM5DQ9BY66 1539 aa17.73■□□□□ 0.43
CACNA1D-228ENST00000638120 TONSLQ96HA7 1378 aa17.72■□□□□ 0.43
CACNA1D-228ENST00000638120 FANCAO15360 1455 aa17.71■□□□□ 0.43
CACNA1D-228ENST00000638120 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
CACNA1D-228ENST00000638120 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
CACNA1D-228ENST00000638120 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
CACNA1D-228ENST00000638120 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
CACNA1D-228ENST00000638120 ANKRD30BQ9BXX2 1392 aa17.69■□□□□ 0.42
CACNA1D-228ENST00000638120 TRAPPC8Q9Y2L5 1435 aa17.68■□□□□ 0.42
CACNA1D-228ENST00000638120 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
CACNA1D-228ENST00000638120 PPP1R15AO75807 674 aaPredicted RBP17.67■□□□□ 0.42
CACNA1D-228ENST00000638120 DUOX2Q9NRD8 1548 aa17.66■□□□□ 0.42
CACNA1D-228ENST00000638120 UNC13BO14795 1591 aa17.66■□□□□ 0.42
CACNA1D-228ENST00000638120 RPRD2Q5VT52 1461 aaKnown RBP17.65■□□□□ 0.42
CACNA1D-228ENST00000638120 ZFYVE16Q7Z3T8 1539 aa17.65■□□□□ 0.42
CACNA1D-228ENST00000638120 FOXD1Q16676 465 aa17.65■□□□□ 0.42
CACNA1D-228ENST00000638120 RTEL1-TNFRSF6BF6WH68 1400 aa17.64■□□□□ 0.41
CACNA1D-228ENST00000638120 CFAP74Q9C0B2 1584 aa17.64■□□□□ 0.41
CACNA1D-228ENST00000638120 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
CACNA1D-228ENST00000638120 NUP155O75694 1391 aa17.63■□□□□ 0.41
CACNA1D-228ENST00000638120 INO80Q9ULG1 1556 aaPredicted RBP17.63■□□□□ 0.41
CACNA1D-228ENST00000638120 ERBINQ96RT1 1412 aa17.63■□□□□ 0.41
CACNA1D-228ENST00000638120 FAM135AQ9P2D6 1515 aa17.6■□□□□ 0.41
CACNA1D-228ENST00000638120 CD109Q6YHK3 1445 aa17.6■□□□□ 0.41
CACNA1D-228ENST00000638120 SPAG9O60271 1321 aaKnown RBP17.59■□□□□ 0.41
CACNA1D-228ENST00000638120 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
CACNA1D-228ENST00000638120 PKD2Q13563 968 aa17.59■□□□□ 0.41
CACNA1D-228ENST00000638120 SCAPERQ9BY12 1400 aa17.59■□□□□ 0.41
CACNA1D-228ENST00000638120 ATP7AQ04656 1500 aa17.59■□□□□ 0.41
CACNA1D-228ENST00000638120 TEX14Q8IWB6 1497 aa17.58■□□□□ 0.4
CACNA1D-228ENST00000638120 IQGAP3Q86VI3 1631 aa17.58■□□□□ 0.4
CACNA1D-228ENST00000638120 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
CACNA1D-228ENST00000638120 AFAP1Q8N556 730 aa17.57■□□□□ 0.4
CACNA1D-228ENST00000638120 ZNF518AQ6AHZ1 1483 aa17.54■□□□□ 0.4
CACNA1D-228ENST00000638120 GLI2P10070 1586 aa17.53■□□□□ 0.4
CACNA1D-228ENST00000638120 MAP3K4Q9Y6R4 1608 aa17.53■□□□□ 0.4
CACNA1D-228ENST00000638120 L3MBTL2Q969R5 705 aa17.52■□□□□ 0.4
CACNA1D-228ENST00000638120 KDM5CP41229 1560 aa17.52■□□□□ 0.4
CACNA1D-228ENST00000638120 NEO1Q92859 1461 aa17.52■□□□□ 0.4
CACNA1D-228ENST00000638120 DEPDC5O75140 1603 aa17.51■□□□□ 0.39
CACNA1D-228ENST00000638120 KIDINS220Q9ULH0 1771 aa17.51■□□□□ 0.39
CACNA1D-228ENST00000638120 POGZQ7Z3K3 1410 aa17.51■□□□□ 0.39
CACNA1D-228ENST00000638120 EIF2AK4Q9P2K8 1649 aaKnown RBP17.51■□□□□ 0.39
CACNA1D-228ENST00000638120 DIP2BQ9P265 1576 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms