RNA–Protein interactions for RNA: ENST00000638000.1

ARID1B-235, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-235ENST00000638000 ABCA8O94911 1581 aa12.49□□□□□ -0.41
ARID1B-235ENST00000638000 SHROOM2Q13796 1616 aa12.49□□□□□ -0.41
ARID1B-235ENST00000638000 TROQ12816 1431 aaPredicted RBP12.49□□□□□ -0.41
ARID1B-235ENST00000638000 GCC2Q8IWJ2 1684 aa12.48□□□□□ -0.41
ARID1B-235ENST00000638000 JPH4Q96JJ6 628 aa12.48□□□□□ -0.41
ARID1B-235ENST00000638000 NAIPQ13075 1403 aa12.48□□□□□ -0.41
ARID1B-235ENST00000638000 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
ARID1B-235ENST00000638000 CDK13Q14004 1512 aaKnown RBP12.46□□□□□ -0.41
ARID1B-235ENST00000638000 ITSN2Q9NZM3 1697 aa12.46□□□□□ -0.42
ARID1B-235ENST00000638000 PTPRKQ15262 1439 aa12.45□□□□□ -0.42
ARID1B-235ENST00000638000 FAM50AQ14320 339 aaKnown RBP12.45□□□□□ -0.42
ARID1B-235ENST00000638000 DNMT1P26358 1616 aaKnown RBP12.44□□□□□ -0.42
ARID1B-235ENST00000638000 DIEXFQ68CQ4 756 aaKnown RBP12.44□□□□□ -0.42
ARID1B-235ENST00000638000 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
ARID1B-235ENST00000638000 ATP1B4Q9UN42 357 aaPredicted RBP12.44□□□□□ -0.42
ARID1B-235ENST00000638000 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
ARID1B-235ENST00000638000 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
ARID1B-235ENST00000638000 TRHP20396 242 aaPredicted RBP12.41□□□□□ -0.42
ARID1B-235ENST00000638000 ADGRL2O95490 1459 aa12.4□□□□□ -0.42
ARID1B-235ENST00000638000 PLB1Q6P1J6 1458 aa12.4□□□□□ -0.42
ARID1B-235ENST00000638000 ABCB7O75027 752 aa12.39□□□□□ -0.43
ARID1B-235ENST00000638000 SHANK2Q9UPX8 1470 aa12.38□□□□□ -0.43
ARID1B-235ENST00000638000 GPATCH8Q9UKJ3 1502 aaKnown RBP12.38□□□□□ -0.43
ARID1B-235ENST00000638000 DAPK1P53355 1430 aa12.38□□□□□ -0.43
ARID1B-235ENST00000638000 ATP10BO94823 1461 aa12.37□□□□□ -0.43
ARID1B-235ENST00000638000 ABCC10Q5T3U5 1492 aa12.37□□□□□ -0.43
ARID1B-235ENST00000638000 CHD1O14646 1710 aa12.37□□□□□ -0.43
ARID1B-235ENST00000638000 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
ARID1B-235ENST00000638000 KIF14Q15058 1648 aa12.36□□□□□ -0.43
ARID1B-235ENST00000638000 ABCC5O15440 1437 aa12.35□□□□□ -0.43
ARID1B-235ENST00000638000 PRG4Q92954 1404 aaPredicted RBP12.35□□□□□ -0.43
ARID1B-235ENST00000638000 UHRF1BP1LA0JNW5 1464 aa12.35□□□□□ -0.43
ARID1B-235ENST00000638000 CLASP1Q7Z460 1538 aa12.35□□□□□ -0.43
ARID1B-235ENST00000638000 PTPRGP23470 1445 aa12.34□□□□□ -0.43
ARID1B-235ENST00000638000 ITGAEP38570 1179 aa12.34□□□□□ -0.43
ARID1B-235ENST00000638000 ARHGEF5Q12774 1597 aa12.33□□□□□ -0.44
ARID1B-235ENST00000638000 CROCC2H7BZ55 1655 aa12.33□□□□□ -0.44
ARID1B-235ENST00000638000 CAMSAP2Q08AD1 1489 aa12.32□□□□□ -0.44
ARID1B-235ENST00000638000 RSPH4AQ5TD94 716 aa12.32□□□□□ -0.44
ARID1B-235ENST00000638000 ADGBQ8N7X0 1667 aa12.32□□□□□ -0.44
ARID1B-235ENST00000638000 PLEKHD1A6NEE1 506 aa12.31□□□□□ -0.44
ARID1B-235ENST00000638000 ABCC2Q92887 1545 aa12.31□□□□□ -0.44
ARID1B-235ENST00000638000 NCOA1Q15788 1441 aa12.3□□□□□ -0.44
ARID1B-235ENST00000638000 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
ARID1B-235ENST00000638000 PPP1R15AO75807 674 aaPredicted RBP12.29□□□□□ -0.44
ARID1B-235ENST00000638000 DENND4BO75064 1496 aaPredicted RBP12.29□□□□□ -0.44
ARID1B-235ENST00000638000 FBLN2P98095 1184 aa12.28□□□□□ -0.44
ARID1B-235ENST00000638000 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.45
ARID1B-235ENST00000638000 KDM5DQ9BY66 1539 aa12.27□□□□□ -0.45
ARID1B-235ENST00000638000 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.45
ARID1B-235ENST00000638000 CFDP1Q9UEE9 299 aaPredicted RBP12.27□□□□□ -0.45
ARID1B-235ENST00000638000 PREX2Q70Z35 1606 aa12.26□□□□□ -0.45
ARID1B-235ENST00000638000 PLEKHH2Q8IVE3 1493 aa12.26□□□□□ -0.45
ARID1B-235ENST00000638000 KIAA1107Q9UPP5 1409 aa12.26□□□□□ -0.45
ARID1B-235ENST00000638000 MAST1Q9Y2H9 1570 aa12.26□□□□□ -0.45
ARID1B-235ENST00000638000 ANKRD30AQ9BXX3 1397 aa12.25□□□□□ -0.45
ARID1B-235ENST00000638000 MBD5Q9P267 1494 aa12.24□□□□□ -0.45
ARID1B-235ENST00000638000 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
ARID1B-235ENST00000638000 RPRD2Q5VT52 1461 aaKnown RBP12.23□□□□□ -0.45
ARID1B-235ENST00000638000 TONSLQ96HA7 1378 aa12.22□□□□□ -0.45
ARID1B-235ENST00000638000 KDM6BO15054 1643 aa12.22□□□□□ -0.45
ARID1B-235ENST00000638000 CENPBP07199 599 aaPredicted RBP12.2□□□□□ -0.46
ARID1B-235ENST00000638000 MPHOSPH9Q99550 1183 aa12.2□□□□□ -0.46
ARID1B-235ENST00000638000 CDC42BPBQ9Y5S2 1711 aa12.2□□□□□ -0.46
ARID1B-235ENST00000638000 CCDC141Q6ZP82 1450 aa12.2□□□□□ -0.46
ARID1B-235ENST00000638000 SIN3AQ96ST3 1273 aa12.19□□□□□ -0.46
ARID1B-235ENST00000638000 C9orf84Q5VXU9 1444 aa12.18□□□□□ -0.46
ARID1B-235ENST00000638000 ANKRD50Q9ULJ7 1429 aa12.18□□□□□ -0.46
ARID1B-235ENST00000638000 PLXNC1O60486 1568 aa12.18□□□□□ -0.46
ARID1B-235ENST00000638000 PZPP20742 1482 aa12.18□□□□□ -0.46
ARID1B-235ENST00000638000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.18□□□□□ -0.46
ARID1B-235ENST00000638000 RRP7BPQ9NSQ0 103 aa12.18□□□□□ -0.46
ARID1B-235ENST00000638000 ZNF644Q9H582 1327 aaPredicted RBP12.17□□□□□ -0.46
ARID1B-235ENST00000638000 SAMD9LQ8IVG5 1584 aa12.17□□□□□ -0.46
ARID1B-235ENST00000638000 MYO5CQ9NQX4 1742 aa12.16□□□□□ -0.46
ARID1B-235ENST00000638000 PLCH2O75038 1416 aa12.15□□□□□ -0.46
ARID1B-235ENST00000638000 TEX14Q8IWB6 1497 aa12.15□□□□□ -0.46
ARID1B-235ENST00000638000 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
ARID1B-235ENST00000638000 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
ARID1B-235ENST00000638000 ZCCHC11Q5TAX3 1644 aaKnown RBP12.14□□□□□ -0.47
ARID1B-235ENST00000638000 MIER1Q8N108 512 aa12.13□□□□□ -0.47
ARID1B-235ENST00000638000 CHIC2Q9UKJ5 165 aa12.13□□□□□ -0.47
ARID1B-235ENST00000638000 ERCC6L2Q5T890 1561 aa12.13□□□□□ -0.47
ARID1B-235ENST00000638000 TTC37Q6PGP7 1564 aa12.13□□□□□ -0.47
ARID1B-235ENST00000638000 ARHGEF12Q9NZN5 1544 aa12.13□□□□□ -0.47
ARID1B-235ENST00000638000 RTEL1-TNFRSF6BF6WH68 1400 aa12.12□□□□□ -0.47
ARID1B-235ENST00000638000 MAGI2Q86UL8 1455 aa12.12□□□□□ -0.47
ARID1B-235ENST00000638000 WDR7Q9Y4E6 1490 aa12.12□□□□□ -0.47
ARID1B-235ENST00000638000 UNC13BO14795 1591 aa12.11□□□□□ -0.47
ARID1B-235ENST00000638000 NEUROD1Q13562 356 aa12.11□□□□□ -0.47
ARID1B-235ENST00000638000 ATP10AO60312 1499 aa12.1□□□□□ -0.47
ARID1B-235ENST00000638000 KIF15Q9NS87 1388 aa12.1□□□□□ -0.47
ARID1B-235ENST00000638000 UHRF1BP1Q6BDS2 1440 aa12.1□□□□□ -0.47
ARID1B-235ENST00000638000 ERBINQ96RT1 1412 aa12.1□□□□□ -0.47
ARID1B-235ENST00000638000 ABCC1P33527 1531 aa12.09□□□□□ -0.47
ARID1B-235ENST00000638000 DUOX2Q9NRD8 1548 aa12.09□□□□□ -0.47
ARID1B-235ENST00000638000 ARID3CA6NKF2 412 aa12.09□□□□□ -0.47
ARID1B-235ENST00000638000 TRIM52Q96A61 297 aa12.09□□□□□ -0.47
ARID1B-235ENST00000638000 ARHGAP5Q13017 1502 aa12.08□□□□□ -0.48
ARID1B-235ENST00000638000 ABCA9Q8IUA7 1624 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms