RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 FBXO3Q9UK99 471 aa24.08■■□□□ 1.45
CACNA1A-246ENST00000637736 PPP4R2Q9NY27 417 aa24.08■■□□□ 1.45
CACNA1A-246ENST00000637736 TPM4P67936 248 aa24.08■■□□□ 1.45
CACNA1A-246ENST00000637736 RTF1Q92541 710 aaKnown RBP24.07■■□□□ 1.44
CACNA1A-246ENST00000637736 CREBRFQ8IUR6 639 aa24.07■■□□□ 1.44
CACNA1A-246ENST00000637736 CC2D1BQ5T0F9 858 aaKnown RBP24.05■■□□□ 1.44
CACNA1A-246ENST00000637736 ZNF330Q9Y3S2 320 aaPredicted RBP24.04■■□□□ 1.44
CACNA1A-246ENST00000637736 G3V3G9 751 aa24.04■■□□□ 1.44
CACNA1A-246ENST00000637736 DCAF8Q5TAQ9 597 aa24.04■■□□□ 1.44
CACNA1A-246ENST00000637736 TMF1P82094 1093 aa24.03■■□□□ 1.44
CACNA1A-246ENST00000637736 HTATSF1O43719 755 aaKnown RBP24.02■■□□□ 1.44
CACNA1A-246ENST00000637736 HSP90B1P14625 803 aaKnown RBP24.02■■□□□ 1.44
CACNA1A-246ENST00000637736 APBB1O00213 710 aa24.01■■□□□ 1.43
CACNA1A-246ENST00000637736 RASSF8Q8NHQ8 419 aa24.01■■□□□ 1.43
CACNA1A-246ENST00000637736 KIF27Q86VH2 1401 aa24■■□□□ 1.43
CACNA1A-246ENST00000637736 CCDC34Q96HJ3 373 aa24■■□□□ 1.43
CACNA1A-246ENST00000637736 CEP162Q5TB80 1403 aa23.98■■□□□ 1.43
CACNA1A-246ENST00000637736 VPS53Q5VIR6 699 aa23.98■■□□□ 1.43
CACNA1A-246ENST00000637736 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
CACNA1A-246ENST00000637736 CALD1Q05682 793 aaKnown RBP23.97■■□□□ 1.43
CACNA1A-246ENST00000637736 SRPK2P78362 688 aaKnown RBP23.96■■□□□ 1.43
CACNA1A-246ENST00000637736 BAZ1BQ9UIG0 1483 aaKnown RBP23.96■■□□□ 1.43
CACNA1A-246ENST00000637736 SYAP1Q96A49 352 aaPredicted RBP23.95■■□□□ 1.42
CACNA1A-246ENST00000637736 CHMP4AQ9BY43 222 aa23.95■■□□□ 1.42
CACNA1A-246ENST00000637736 IPO8O15397 1037 aaKnown RBP23.95■■□□□ 1.42
CACNA1A-246ENST00000637736 GORABQ5T7V8 394 aa23.94■■□□□ 1.42
CACNA1A-246ENST00000637736 GPATCH3Q96I76 525 aa23.94■■□□□ 1.42
CACNA1A-246ENST00000637736 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
CACNA1A-246ENST00000637736 GBP4Q96PP9 640 aa23.92■■□□□ 1.42
CACNA1A-246ENST00000637736 CHMP3Q9Y3E7 222 aa23.92■■□□□ 1.42
CACNA1A-246ENST00000637736 FHAD1B1AJZ9 1412 aa23.92■■□□□ 1.42
CACNA1A-246ENST00000637736 WWC1Q8IX03 1113 aa23.92■■□□□ 1.42
CACNA1A-246ENST00000637736 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
CACNA1A-246ENST00000637736 TAF7LQ5H9L4 462 aa23.9■■□□□ 1.42
CACNA1A-246ENST00000637736 SETQ01105 290 aaPredicted RBP23.9■■□□□ 1.42
CACNA1A-246ENST00000637736 GZF1Q9H116 711 aaPredicted RBP23.89■■□□□ 1.42
CACNA1A-246ENST00000637736 CCNB3Q8WWL7 1395 aa23.89■■□□□ 1.41
CACNA1A-246ENST00000637736 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.88■■□□□ 1.41
CACNA1A-246ENST00000637736 MORC1Q86VD1 984 aa23.88■■□□□ 1.41
CACNA1A-246ENST00000637736 MARCH6O60337 910 aa23.87■■□□□ 1.41
CACNA1A-246ENST00000637736 PAK3O75914 559 aaPredicted RBP23.86■■□□□ 1.41
CACNA1A-246ENST00000637736 TPM3P06753 285 aa23.85■■□□□ 1.41
CACNA1A-246ENST00000637736 CCDC9Q9Y3X0 531 aaKnown RBP23.85■■□□□ 1.41
CACNA1A-246ENST00000637736 PES1O00541 588 aaKnown RBP23.85■■□□□ 1.41
CACNA1A-246ENST00000637736 TRHP20396 242 aaPredicted RBP23.85■■□□□ 1.41
CACNA1A-246ENST00000637736 B4GALNT3Q6L9W6 998 aa23.85■■□□□ 1.41
CACNA1A-246ENST00000637736 CNKSR2Q8WXI2 1034 aa23.85■■□□□ 1.41
CACNA1A-246ENST00000637736 PATL2C9JE40 543 aaKnown RBP23.84■■□□□ 1.41
CACNA1A-246ENST00000637736 CSPP1Q1MSJ5 1256 aa23.84■■□□□ 1.41
CACNA1A-246ENST00000637736 HDGFL2Q7Z4V5 671 aaPredicted RBP23.84■■□□□ 1.41
CACNA1A-246ENST00000637736 CSB-PGBD3P0DP91 1061 aa23.83■■□□□ 1.41
CACNA1A-246ENST00000637736 HDAC5Q9UQL6 1122 aa23.82■■□□□ 1.4
CACNA1A-246ENST00000637736 SPAG9O60271 1321 aaKnown RBP23.81■■□□□ 1.4
CACNA1A-246ENST00000637736 DCAF11Q8TEB1 546 aa23.81■■□□□ 1.4
CACNA1A-246ENST00000637736 CALRP27797 417 aaKnown RBP23.79■■□□□ 1.4
CACNA1A-246ENST00000637736 KTN1Q86UP2 1357 aaKnown RBP23.78■■□□□ 1.4
CACNA1A-246ENST00000637736 NACADO15069 1562 aa23.78■■□□□ 1.4
CACNA1A-246ENST00000637736 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
CACNA1A-246ENST00000637736 TRIM6-TRIM34B2RNG4 842 aa23.78■■□□□ 1.4
CACNA1A-246ENST00000637736 MLECQ14165 292 aa23.78■■□□□ 1.4
CACNA1A-246ENST00000637736 SAFB2Q14151 953 aaKnown RBP eCLIP23.77■■□□□ 1.4
CACNA1A-246ENST00000637736 FRAT2O75474 233 aaPredicted RBP23.77■■□□□ 1.4
CACNA1A-246ENST00000637736 TPD52L1Q16890 204 aaPredicted RBP23.77■■□□□ 1.4
CACNA1A-246ENST00000637736 TSR1Q2NL82 804 aaKnown RBP23.76■■□□□ 1.39
CACNA1A-246ENST00000637736 EIF3AQ14152 1382 aaKnown RBP23.75■■□□□ 1.39
CACNA1A-246ENST00000637736 DEKP35659 375 aaKnown RBP23.75■■□□□ 1.39
CACNA1A-246ENST00000637736 PHF14O94880 888 aa23.74■■□□□ 1.39
CACNA1A-246ENST00000637736 TCEAL9Q9UHQ7 104 aa23.73■■□□□ 1.39
CACNA1A-246ENST00000637736 TOMM22Q9NS69 142 aa23.71■■□□□ 1.39
CACNA1A-246ENST00000637736 RWDD1Q9H446 243 aaPredicted RBP23.7■■□□□ 1.38
CACNA1A-246ENST00000637736 ARHGAP35Q9NRY4 1499 aa23.69■■□□□ 1.38
CACNA1A-246ENST00000637736 ITPRIPQ8IWB1 547 aa23.69■■□□□ 1.38
CACNA1A-246ENST00000637736 STK31Q9BXU1 1019 aa23.68■■□□□ 1.38
CACNA1A-246ENST00000637736 CCAR2Q8N163 923 aaKnown RBP23.68■■□□□ 1.38
CACNA1A-246ENST00000637736 SF3A1Q15459 793 aaKnown RBP23.68■■□□□ 1.38
CACNA1A-246ENST00000637736 KIF3AQ9Y496 699 aa23.67■■□□□ 1.38
CACNA1A-246ENST00000637736 HMMRO75330 724 aa23.66■■□□□ 1.38
CACNA1A-246ENST00000637736 SLKQ9H2G2 1235 aaPredicted RBP23.66■■□□□ 1.38
CACNA1A-246ENST00000637736 TPM2P07951 284 aa23.66■■□□□ 1.38
CACNA1A-246ENST00000637736 STK26Q9P289 416 aa23.66■■□□□ 1.38
CACNA1A-246ENST00000637736 GTF2E1P29083 439 aaPredicted RBP23.65■■□□□ 1.38
CACNA1A-246ENST00000637736 RRP12Q5JTH9 1297 aaKnown RBP23.65■■□□□ 1.38
CACNA1A-246ENST00000637736 PMFBP1Q8TBY8 1022 aa23.65■■□□□ 1.38
CACNA1A-246ENST00000637736 ROCK2O75116 1388 aaKnown RBP23.65■■□□□ 1.38
CACNA1A-246ENST00000637736 CCDC70Q6NSX1 233 aa23.64■■□□□ 1.38
CACNA1A-246ENST00000637736 NOL8Q76FK4 1167 aaKnown RBP23.64■■□□□ 1.37
CACNA1A-246ENST00000637736 TNIKQ9UKE5 1360 aa23.61■■□□□ 1.37
CACNA1A-246ENST00000637736 CTDP1Q9Y5B0 961 aaPredicted RBP23.6■■□□□ 1.37
CACNA1A-246ENST00000637736 KIF16BQ96L93 1317 aa23.59■■□□□ 1.37
CACNA1A-246ENST00000637736 RAD21O60216 631 aa23.58■■□□□ 1.37
CACNA1A-246ENST00000637736 U2AF1L5P0DN76 240 aaPredicted RBP23.58■■□□□ 1.36
CACNA1A-246ENST00000637736 U2AF1Q01081 240 aaKnown RBP eCLIP23.58■■□□□ 1.36
CACNA1A-246ENST00000637736 GOLGA6L3A6NEY3 463 aa23.57■■□□□ 1.36
CACNA1A-246ENST00000637736 TPM1P09493 284 aa23.57■■□□□ 1.36
CACNA1A-246ENST00000637736 H3BQV1 296 aa23.57■■□□□ 1.36
CACNA1A-246ENST00000637736 IFFO2Q5TF58 517 aa23.57■■□□□ 1.36
CACNA1A-246ENST00000637736 TRIM34Q9BYJ4 488 aa23.57■■□□□ 1.36
CACNA1A-246ENST00000637736 MFAP1P55081 439 aaKnown RBP23.57■■□□□ 1.36
CACNA1A-246ENST00000637736 CCER2I3L3R5 266 aa23.56■■□□□ 1.36
CACNA1A-246ENST00000637736 CHMP4CQ96CF2 233 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms