RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 CENPBP07199 599 aaPredicted RBP24.66■■□□□ 1.54
CHRNA7-227ENST00000637350 ZNF644Q9H582 1327 aaPredicted RBP24.65■■□□□ 1.54
CHRNA7-227ENST00000637350 ZCCHC11Q5TAX3 1644 aaKnown RBP24.65■■□□□ 1.54
CHRNA7-227ENST00000637350 SIN3AQ96ST3 1273 aa24.65■■□□□ 1.54
CHRNA7-227ENST00000637350 DNMT1P26358 1616 aaKnown RBP24.64■■□□□ 1.53
CHRNA7-227ENST00000637350 CAMSAP2Q08AD1 1489 aa24.64■■□□□ 1.53
CHRNA7-227ENST00000637350 NAIPQ13075 1403 aa24.64■■□□□ 1.53
CHRNA7-227ENST00000637350 DAPK1P53355 1430 aa24.63■■□□□ 1.53
CHRNA7-227ENST00000637350 YTHDC1Q96MU7 727 aaKnown RBP24.62■■□□□ 1.53
CHRNA7-227ENST00000637350 AKNAQ7Z591 1439 aa24.61■■□□□ 1.53
CHRNA7-227ENST00000637350 CHIC2Q9UKJ5 165 aa24.6■■□□□ 1.53
CHRNA7-227ENST00000637350 GCC2Q8IWJ2 1684 aa24.6■■□□□ 1.53
CHRNA7-227ENST00000637350 ABCC5O15440 1437 aa24.59■■□□□ 1.53
CHRNA7-227ENST00000637350 ZNF777Q9ULD5 760 aaPredicted RBP24.58■■□□□ 1.53
CHRNA7-227ENST00000637350 RRP7BPQ9NSQ0 103 aa24.55■■□□□ 1.52
CHRNA7-227ENST00000637350 ROCK1Q13464 1354 aa24.55■■□□□ 1.52
CHRNA7-227ENST00000637350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.54■■□□□ 1.52
CHRNA7-227ENST00000637350 PREX2Q70Z35 1606 aa24.54■■□□□ 1.52
CHRNA7-227ENST00000637350 TTC37Q6PGP7 1564 aa24.53■■□□□ 1.52
CHRNA7-227ENST00000637350 CDC42BPBQ9Y5S2 1711 aa24.52■■□□□ 1.52
CHRNA7-227ENST00000637350 DNAJC5Q9H3Z4 198 aa24.52■■□□□ 1.52
CHRNA7-227ENST00000637350 KDM6BO15054 1643 aa24.52■■□□□ 1.52
CHRNA7-227ENST00000637350 KCNH8Q96L42 1107 aa24.5■■□□□ 1.51
CHRNA7-227ENST00000637350 GTF3C3Q9Y5Q9 886 aa24.5■■□□□ 1.51
CHRNA7-227ENST00000637350 CROCC2H7BZ55 1655 aa24.48■■□□□ 1.51
CHRNA7-227ENST00000637350 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
CHRNA7-227ENST00000637350 ADGBQ8N7X0 1667 aa24.44■■□□□ 1.5
CHRNA7-227ENST00000637350 ARHGAP5Q13017 1502 aa24.44■■□□□ 1.5
CHRNA7-227ENST00000637350 SAMD9LQ8IVG5 1584 aa24.44■■□□□ 1.5
CHRNA7-227ENST00000637350 WDR7Q9Y4E6 1490 aa24.43■■□□□ 1.5
CHRNA7-227ENST00000637350 ADGRL2O95490 1459 aa24.42■■□□□ 1.5
CHRNA7-227ENST00000637350 ARHGEF5Q12774 1597 aa24.42■■□□□ 1.5
CHRNA7-227ENST00000637350 NCOA1Q15788 1441 aa24.42■■□□□ 1.5
CHRNA7-227ENST00000637350 SHANK2Q9UPX8 1470 aa24.42■■□□□ 1.5
CHRNA7-227ENST00000637350 DENND4BO75064 1496 aaPredicted RBP24.41■■□□□ 1.5
CHRNA7-227ENST00000637350 MBD5Q9P267 1494 aa24.4■■□□□ 1.5
CHRNA7-227ENST00000637350 PLCH2O75038 1416 aa24.39■■□□□ 1.49
CHRNA7-227ENST00000637350 HNRNPMP52272 730 aaKnown RBP eCLIP24.38■■□□□ 1.49
CHRNA7-227ENST00000637350 TIMELESSQ9UNS1 1208 aa24.38■■□□□ 1.49
CHRNA7-227ENST00000637350 ANKRD30AQ9BXX3 1397 aa24.38■■□□□ 1.49
CHRNA7-227ENST00000637350 RSPH4AQ5TD94 716 aa24.38■■□□□ 1.49
CHRNA7-227ENST00000637350 TSPY4P0CV99 314 aa24.37■■□□□ 1.49
CHRNA7-227ENST00000637350 TSPY10P0CW01 314 aa24.37■■□□□ 1.49
CHRNA7-227ENST00000637350 NPM1P06748 294 aaKnown RBP eCLIP24.37■■□□□ 1.49
CHRNA7-227ENST00000637350 C9orf84Q5VXU9 1444 aa24.36■■□□□ 1.49
CHRNA7-227ENST00000637350 PPP1R15AO75807 674 aaPredicted RBP24.36■■□□□ 1.49
CHRNA7-227ENST00000637350 ASXL2Q76L83 1435 aa24.35■■□□□ 1.49
CHRNA7-227ENST00000637350 CCDC141Q6ZP82 1450 aa24.35■■□□□ 1.49
CHRNA7-227ENST00000637350 PLEKHH2Q8IVE3 1493 aa24.35■■□□□ 1.49
CHRNA7-227ENST00000637350 TRIM52Q96A61 297 aa24.34■■□□□ 1.49
CHRNA7-227ENST00000637350 KIAA1107Q9UPP5 1409 aa24.33■■□□□ 1.49
CHRNA7-227ENST00000637350 SYCP2Q9BX26 1530 aa24.33■■□□□ 1.49
CHRNA7-227ENST00000637350 TONSLQ96HA7 1378 aa24.32■■□□□ 1.48
CHRNA7-227ENST00000637350 EFCAB2Q5VUJ9 269 aa24.32■■□□□ 1.48
CHRNA7-227ENST00000637350 ARAP3Q8WWN8 1544 aa24.31■■□□□ 1.48
CHRNA7-227ENST00000637350 ABCA9Q8IUA7 1624 aa24.3■■□□□ 1.48
CHRNA7-227ENST00000637350 HIRIP3Q9BW71 556 aaPredicted RBP24.26■■□□□ 1.47
CHRNA7-227ENST00000637350 ANKRD50Q9ULJ7 1429 aa24.26■■□□□ 1.47
CHRNA7-227ENST00000637350 MPHOSPH9Q99550 1183 aa24.25■■□□□ 1.47
CHRNA7-227ENST00000637350 MAST1Q9Y2H9 1570 aa24.24■■□□□ 1.47
CHRNA7-227ENST00000637350 RIMBP3CA6NJZ7 1639 aa24.24■■□□□ 1.47
CHRNA7-227ENST00000637350 RIMBP3BA6NNM3 1639 aa24.24■■□□□ 1.47
CHRNA7-227ENST00000637350 RIMBP3Q9UFD9 1639 aa24.24■■□□□ 1.47
CHRNA7-227ENST00000637350 ABCC1P33527 1531 aa24.23■■□□□ 1.47
CHRNA7-227ENST00000637350 ARHGEF12Q9NZN5 1544 aa24.23■■□□□ 1.47
CHRNA7-227ENST00000637350 KIF15Q9NS87 1388 aa24.22■■□□□ 1.47
CHRNA7-227ENST00000637350 DDX10Q13206 875 aaKnown RBP24.19■■□□□ 1.46
CHRNA7-227ENST00000637350 FANCAO15360 1455 aa24.19■■□□□ 1.46
CHRNA7-227ENST00000637350 CYB5RLQ6IPT4 315 aa24.18■■□□□ 1.46
CHRNA7-227ENST00000637350 SLC4A1APQ9BWU0 796 aaKnown RBP24.15■■□□□ 1.46
CHRNA7-227ENST00000637350 PLXNC1O60486 1568 aa24.15■■□□□ 1.46
CHRNA7-227ENST00000637350 TRAPPC8Q9Y2L5 1435 aa24.14■■□□□ 1.45
CHRNA7-227ENST00000637350 PZPP20742 1482 aa24.14■■□□□ 1.45
CHRNA7-227ENST00000637350 FOXD1Q16676 465 aa24.12■■□□□ 1.45
CHRNA7-227ENST00000637350 CD109Q6YHK3 1445 aa24.09■■□□□ 1.45
CHRNA7-227ENST00000637350 ADGRL1O94910 1474 aa24.08■■□□□ 1.45
CHRNA7-227ENST00000637350 NUP155O75694 1391 aa24.07■■□□□ 1.44
CHRNA7-227ENST00000637350 ANKRD30BQ9BXX2 1392 aa24.07■■□□□ 1.44
CHRNA7-227ENST00000637350 KDM5DQ9BY66 1539 aa24.07■■□□□ 1.44
CHRNA7-227ENST00000637350 RTEL1-TNFRSF6BF6WH68 1400 aa24.06■■□□□ 1.44
CHRNA7-227ENST00000637350 AFAP1Q8N556 730 aa24.06■■□□□ 1.44
CHRNA7-227ENST00000637350 DUOX2Q9NRD8 1548 aa24.06■■□□□ 1.44
CHRNA7-227ENST00000637350 SPAG9O60271 1321 aaKnown RBP24.06■■□□□ 1.44
CHRNA7-227ENST00000637350 SCAPERQ9BY12 1400 aa24.05■■□□□ 1.44
CHRNA7-227ENST00000637350 CFAP74Q9C0B2 1584 aa24.03■■□□□ 1.44
CHRNA7-227ENST00000637350 ZFYVE16Q7Z3T8 1539 aa24.03■■□□□ 1.44
CHRNA7-227ENST00000637350 RPRD2Q5VT52 1461 aaKnown RBP24.02■■□□□ 1.44
CHRNA7-227ENST00000637350 TEX14Q8IWB6 1497 aa24.02■■□□□ 1.44
CHRNA7-227ENST00000637350 ERBINQ96RT1 1412 aa24.02■■□□□ 1.44
CHRNA7-227ENST00000637350 PKD2Q13563 968 aa24■■□□□ 1.43
CHRNA7-227ENST00000637350 UNC13BO14795 1591 aa23.99■■□□□ 1.43
CHRNA7-227ENST00000637350 INO80Q9ULG1 1556 aaPredicted RBP23.98■■□□□ 1.43
CHRNA7-227ENST00000637350 L3MBTL2Q969R5 705 aa23.98■■□□□ 1.43
CHRNA7-227ENST00000637350 ATP7AQ04656 1500 aa23.97■■□□□ 1.43
CHRNA7-227ENST00000637350 FAM135AQ9P2D6 1515 aa23.95■■□□□ 1.43
CHRNA7-227ENST00000637350 ZNF518AQ6AHZ1 1483 aa23.95■■□□□ 1.42
CHRNA7-227ENST00000637350 GLI2P10070 1586 aa23.94■■□□□ 1.42
CHRNA7-227ENST00000637350 MAP3K4Q9Y6R4 1608 aa23.93■■□□□ 1.42
CHRNA7-227ENST00000637350 NEO1Q92859 1461 aa23.93■■□□□ 1.42
CHRNA7-227ENST00000637350 HSPA5P11021 654 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms