RNA–Protein interactions for RNA: ENST00000637250.2

TCF4-286, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-286ENST00000637250 NCAPD3P42695 1498 aa8.64□□□□□ -1.03
TCF4-286ENST00000637250 RAD54L2Q9Y4B4 1467 aa8.64□□□□□ -1.03
TCF4-286ENST00000637250 DCAF11Q8TEB1 546 aa8.64□□□□□ -1.03
TCF4-286ENST00000637250 PNNQ9H307 717 aaKnown RBP8.64□□□□□ -1.03
TCF4-286ENST00000637250 WASHC2CQ9Y4E1 1318 aa8.64□□□□□ -1.03
TCF4-286ENST00000637250 FAM69CQ0P6D2 419 aa8.63□□□□□ -1.03
TCF4-286ENST00000637250 MRS2Q9HD23 443 aa8.63□□□□□ -1.03
TCF4-286ENST00000637250 LAS1LQ9Y4W2 734 aaKnown RBP8.63□□□□□ -1.03
TCF4-286ENST00000637250 NUDCQ9Y266 331 aa8.63□□□□□ -1.03
TCF4-286ENST00000637250 MAPK8IP3Q9UPT6 1336 aa8.63□□□□□ -1.03
TCF4-286ENST00000637250 SAFB2Q14151 953 aaKnown RBP eCLIP8.63□□□□□ -1.03
TCF4-286ENST00000637250 HMGXB3Q12766 1538 aa8.62□□□□□ -1.03
TCF4-286ENST00000637250 KIF3BO15066 747 aa8.62□□□□□ -1.03
TCF4-286ENST00000637250 MIER1Q8N108 512 aa8.62□□□□□ -1.03
TCF4-286ENST00000637250 CCDC9Q9Y3X0 531 aaKnown RBP8.62□□□□□ -1.03
TCF4-286ENST00000637250 TMF1P82094 1093 aa8.62□□□□□ -1.03
TCF4-286ENST00000637250 IFT140Q96RY7 1462 aa8.62□□□□□ -1.03
TCF4-286ENST00000637250 AQRO60306 1485 aaKnown RBP eCLIP8.61□□□□□ -1.03
TCF4-286ENST00000637250 SUPT16HQ9Y5B9 1047 aaKnown RBP8.61□□□□□ -1.03
TCF4-286ENST00000637250 LAMC3Q9Y6N6 1575 aa8.61□□□□□ -1.03
TCF4-286ENST00000637250 A0A0U1RQG5 324 aaPredicted RBP8.61□□□□□ -1.03
TCF4-286ENST00000637250 NESP48681 1621 aa8.61□□□□□ -1.03
TCF4-286ENST00000637250 SOX12O15370 315 aa8.61□□□□□ -1.03
TCF4-286ENST00000637250 RSPH4AQ5TD94 716 aa8.61□□□□□ -1.03
TCF4-286ENST00000637250 GRIN2BQ13224 1484 aa8.61□□□□□ -1.03
TCF4-286ENST00000637250 VPS8Q8N3P4 1428 aa8.61□□□□□ -1.03
TCF4-286ENST00000637250 HDGFL2Q7Z4V5 671 aaPredicted RBP8.6□□□□□ -1.03
TCF4-286ENST00000637250 DNTTIP2Q5QJE6 756 aaKnown RBP8.6□□□□□ -1.03
TCF4-286ENST00000637250 SETD5Q9C0A6 1442 aa8.59□□□□□ -1.03
TCF4-286ENST00000637250 IRX6P78412 446 aaPredicted RBP8.59□□□□□ -1.03
TCF4-286ENST00000637250 MEX3CQ5U5Q3 659 aaKnown RBP8.58□□□□□ -1.04
TCF4-286ENST00000637250 CSB-PGBD3P0DP91 1061 aa8.58□□□□□ -1.04
TCF4-286ENST00000637250 HSP90AA2PQ14568 343 aaPredicted RBP8.58□□□□□ -1.04
TCF4-286ENST00000637250 CC2D1BQ5T0F9 858 aaKnown RBP8.58□□□□□ -1.04
TCF4-286ENST00000637250 EIF3AQ14152 1382 aaKnown RBP8.58□□□□□ -1.04
TCF4-286ENST00000637250 RBM19Q9Y4C8 960 aaKnown RBP8.58□□□□□ -1.04
TCF4-286ENST00000637250 NUP155O75694 1391 aa8.58□□□□□ -1.04
TCF4-286ENST00000637250 PKD2Q13563 968 aa8.58□□□□□ -1.04
TCF4-286ENST00000637250 RSPH6AQ9H0K4 717 aa8.57□□□□□ -1.04
TCF4-286ENST00000637250 U2SURPO15042 1029 aaKnown RBP8.57□□□□□ -1.04
TCF4-286ENST00000637250 ROCK2O75116 1388 aaKnown RBP8.57□□□□□ -1.04
TCF4-286ENST00000637250 DNMBPQ6XZF7 1577 aa8.57□□□□□ -1.04
TCF4-286ENST00000637250 ARHGAP5Q13017 1502 aa8.57□□□□□ -1.04
TCF4-286ENST00000637250 NUTM2DQ5VT03 806 aaPredicted RBP8.55□□□□□ -1.04
TCF4-286ENST00000637250 BECN1Q14457 450 aa8.55□□□□□ -1.04
TCF4-286ENST00000637250 SNAPC4Q5SXM2 1469 aa8.55□□□□□ -1.04
TCF4-286ENST00000637250 CUX1P39880 1505 aa8.54□□□□□ -1.04
TCF4-286ENST00000637250 FTSJ3Q8IY81 847 aaKnown RBP8.54□□□□□ -1.04
TCF4-286ENST00000637250 RTF1Q92541 710 aaKnown RBP8.54□□□□□ -1.04
TCF4-286ENST00000637250 SIN3AQ96ST3 1273 aa8.54□□□□□ -1.04
TCF4-286ENST00000637250 GOLGA2Q08379 1002 aa8.54□□□□□ -1.04
TCF4-286ENST00000637250 UACAQ9BZF9 1416 aa8.53□□□□□ -1.04
TCF4-286ENST00000637250 MORC1Q86VD1 984 aa8.53□□□□□ -1.04
TCF4-286ENST00000637250 PTMAP06454 111 aaKnown RBP8.53□□□□□ -1.04
TCF4-286ENST00000637250 FOXD1Q16676 465 aa8.53□□□□□ -1.04
TCF4-286ENST00000637250 L1TD1Q5T7N2 865 aaKnown RBP8.53□□□□□ -1.04
TCF4-286ENST00000637250 TNNT3P45378 269 aaPredicted RBP8.53□□□□□ -1.04
TCF4-286ENST00000637250 NEUROD2Q15784 382 aa8.53□□□□□ -1.04
TCF4-286ENST00000637250 ANO8Q9HCE9 1232 aaPredicted RBP8.53□□□□□ -1.04
TCF4-286ENST00000637250 BICRAQ9NZM4 1560 aa8.52□□□□□ -1.04
TCF4-286ENST00000637250 TOPBP1Q92547 1522 aa8.52□□□□□ -1.05
TCF4-286ENST00000637250 KANK4Q5T7N3 995 aaPredicted RBP8.52□□□□□ -1.05
TCF4-286ENST00000637250 TMX4Q9H1E5 349 aaPredicted RBP8.52□□□□□ -1.05
TCF4-286ENST00000637250 MPHOSPH9Q99550 1183 aa8.52□□□□□ -1.05
TCF4-286ENST00000637250 PRG4Q92954 1404 aaPredicted RBP8.52□□□□□ -1.05
TCF4-286ENST00000637250 CUL7Q14999 1698 aa8.52□□□□□ -1.05
TCF4-286ENST00000637250 CASC1Q6TDU7 716 aa8.52□□□□□ -1.05
TCF4-286ENST00000637250 NGDNQ8NEJ9 315 aaKnown RBP8.51□□□□□ -1.05
TCF4-286ENST00000637250 TSHZ2Q9NRE2 1034 aa8.51□□□□□ -1.05
TCF4-286ENST00000637250 CFTRP13569 1480 aa8.51□□□□□ -1.05
TCF4-286ENST00000637250 TOP2BQ02880 1626 aa8.51□□□□□ -1.05
TCF4-286ENST00000637250 HECW1Q76N89 1606 aa8.51□□□□□ -1.05
TCF4-286ENST00000637250 SYNJ2O15056 1496 aa8.51□□□□□ -1.05
TCF4-286ENST00000637250 EVA1CP58658 441 aa8.5□□□□□ -1.05
TCF4-286ENST00000637250 ARID3AQ99856 593 aa8.5□□□□□ -1.05
TCF4-286ENST00000637250 TIMELESSQ9UNS1 1208 aa8.5□□□□□ -1.05
TCF4-286ENST00000637250 OS9Q13438 667 aaPredicted RBP8.5□□□□□ -1.05
TCF4-286ENST00000637250 MSNP26038 577 aaKnown RBP8.49□□□□□ -1.05
TCF4-286ENST00000637250 RUSC2Q8N2Y8 1516 aa8.49□□□□□ -1.05
TCF4-286ENST00000637250 SYNJ1O43426 1573 aa8.49□□□□□ -1.05
TCF4-286ENST00000637250 GOLGA6L22H0YM25 854 aa8.48□□□□□ -1.05
TCF4-286ENST00000637250 KIF21BO75037 1637 aa8.47□□□□□ -1.05
TCF4-286ENST00000637250 SUPT6HQ7KZ85 1726 aaKnown RBP8.47□□□□□ -1.05
TCF4-286ENST00000637250 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.47□□□□□ -1.05
TCF4-286ENST00000637250 TERF2IPQ9NYB0 399 aa8.47□□□□□ -1.05
TCF4-286ENST00000637250 CHMP4BQ9H444 224 aaKnown RBP8.46□□□□□ -1.05
TCF4-286ENST00000637250 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.06
TCF4-286ENST00000637250 KIF21AQ7Z4S6 1674 aa8.45□□□□□ -1.06
TCF4-286ENST00000637250 IGF1RP08069 1367 aa8.45□□□□□ -1.06
TCF4-286ENST00000637250 RAB3GAP2Q9H2M9 1393 aa8.45□□□□□ -1.06
TCF4-286ENST00000637250 PTMSP20962 102 aa8.45□□□□□ -1.06
TCF4-286ENST00000637250 NUTM2FA1L443 756 aa8.45□□□□□ -1.06
TCF4-286ENST00000637250 ATF3P18847 181 aa8.45□□□□□ -1.06
TCF4-286ENST00000637250 AMPHP49418 695 aa8.45□□□□□ -1.06
TCF4-286ENST00000637250 ZNF330Q9Y3S2 320 aaPredicted RBP8.45□□□□□ -1.06
TCF4-286ENST00000637250 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
TCF4-286ENST00000637250 PHF23Q9BUL5 403 aaPredicted RBP8.44□□□□□ -1.06
TCF4-286ENST00000637250 VGFO15240 615 aaPredicted RBP8.44□□□□□ -1.06
TCF4-286ENST00000637250 MS4A1P11836 297 aa8.44□□□□□ -1.06
TCF4-286ENST00000637250 CHAF1AQ13111 956 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms