RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 ADAMTSL3P82987 1691 aa15.55■□□□□ 0.08
CACNA1A-236ENST00000637117 NEO1Q92859 1461 aa15.55■□□□□ 0.08
CACNA1A-236ENST00000637117 PLEKHD1A6NEE1 506 aa15.51■□□□□ 0.07
CACNA1A-236ENST00000637117 RANGAP1P46060 587 aaPredicted RBP15.5■□□□□ 0.07
CACNA1A-236ENST00000637117 RAPGEF6Q8TEU7 1601 aa15.5■□□□□ 0.07
CACNA1A-236ENST00000637117 BCORL1Q5H9F3 1711 aa15.48■□□□□ 0.07
CACNA1A-236ENST00000637117 SAMD9Q5K651 1589 aa15.48■□□□□ 0.07
CACNA1A-236ENST00000637117 FRMPD1Q5SYB0 1578 aa15.46■□□□□ 0.07
CACNA1A-236ENST00000637117 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-236ENST00000637117 MADDQ8WXG6 1647 aa15.46■□□□□ 0.06
CACNA1A-236ENST00000637117 DENND4BO75064 1496 aaPredicted RBP15.46■□□□□ 0.06
CACNA1A-236ENST00000637117 NUP153P49790 1475 aaKnown RBP15.46■□□□□ 0.06
CACNA1A-236ENST00000637117 PCF11O94913 1555 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-236ENST00000637117 LMTK3Q96Q04 1460 aa15.45■□□□□ 0.06
CACNA1A-236ENST00000637117 AKNAQ7Z591 1439 aa15.44■□□□□ 0.06
CACNA1A-236ENST00000637117 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
CACNA1A-236ENST00000637117 MKRN4PQ13434 485 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-236ENST00000637117 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
CACNA1A-236ENST00000637117 HSPA2P54652 639 aa15.43■□□□□ 0.06
CACNA1A-236ENST00000637117 FHOD3Q2V2M9 1422 aa15.43■□□□□ 0.06
CACNA1A-236ENST00000637117 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
CACNA1A-236ENST00000637117 FANCAO15360 1455 aa15.41■□□□□ 0.06
CACNA1A-236ENST00000637117 RIMS1Q86UR5 1692 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-236ENST00000637117 POGZQ7Z3K3 1410 aa15.4■□□□□ 0.06
CACNA1A-236ENST00000637117 ARHGEF40Q8TER5 1519 aa15.39■□□□□ 0.05
CACNA1A-236ENST00000637117 MLECQ14165 292 aa15.39■□□□□ 0.05
CACNA1A-236ENST00000637117 RICTORQ6R327 1708 aa15.39■□□□□ 0.05
CACNA1A-236ENST00000637117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.38■□□□□ 0.05
CACNA1A-236ENST00000637117 CAPN15O75808 1086 aa15.37■□□□□ 0.05
CACNA1A-236ENST00000637117 CERKQ8TCT0 537 aa15.36■□□□□ 0.05
CACNA1A-236ENST00000637117 YEATS2Q9ULM3 1422 aa15.35■□□□□ 0.05
CACNA1A-236ENST00000637117 CFAP74Q9C0B2 1584 aa15.35■□□□□ 0.05
CACNA1A-236ENST00000637117 EEA1Q15075 1411 aa15.34■□□□□ 0.05
CACNA1A-236ENST00000637117 MAGI2Q86UL8 1455 aa15.34■□□□□ 0.05
CACNA1A-236ENST00000637117 POLA2Q14181 598 aa15.34■□□□□ 0.05
CACNA1A-236ENST00000637117 EFCAB5A4FU69 1503 aa15.33■□□□□ 0.05
CACNA1A-236ENST00000637117 ZFYVE16Q7Z3T8 1539 aa15.33■□□□□ 0.05
CACNA1A-236ENST00000637117 SCAPERQ9BY12 1400 aa15.33■□□□□ 0.04
CACNA1A-236ENST00000637117 ZMYM4Q5VZL5 1548 aa15.33■□□□□ 0.04
CACNA1A-236ENST00000637117 PLCH2O75038 1416 aa15.32■□□□□ 0.04
CACNA1A-236ENST00000637117 FBXO3Q9UK99 471 aa15.31■□□□□ 0.04
CACNA1A-236ENST00000637117 TTC37Q6PGP7 1564 aa15.31■□□□□ 0.04
CACNA1A-236ENST00000637117 EFCAB2Q5VUJ9 269 aa15.3■□□□□ 0.04
CACNA1A-236ENST00000637117 HECW1Q76N89 1606 aa15.3■□□□□ 0.04
CACNA1A-236ENST00000637117 SIGLEC1Q9BZZ2 1709 aa15.3■□□□□ 0.04
CACNA1A-236ENST00000637117 ATP1B4Q9UN42 357 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-236ENST00000637117 ATP10AO60312 1499 aa15.28■□□□□ 0.04
CACNA1A-236ENST00000637117 CEBPAP49715 358 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-236ENST00000637117 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-236ENST00000637117 CDK13Q14004 1512 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-236ENST00000637117 CDK11AQ9UQ88 783 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-236ENST00000637117 FER1L4A9Z1Z3 1794 aa15.26■□□□□ 0.03
CACNA1A-236ENST00000637117 PROM2Q8N271 834 aa15.25■□□□□ 0.03
CACNA1A-236ENST00000637117 C9orf84Q5VXU9 1444 aa15.25■□□□□ 0.03
CACNA1A-236ENST00000637117 AFAP1Q8N556 730 aa15.24■□□□□ 0.03
CACNA1A-236ENST00000637117 MYT1LQ9UL68 1186 aa15.24■□□□□ 0.03
CACNA1A-236ENST00000637117 ARHGEF12Q9NZN5 1544 aa15.23■□□□□ 0.03
CACNA1A-236ENST00000637117 UBTFP17480 764 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-236ENST00000637117 FMN1Q68DA7 1419 aa15.2■□□□□ 0.02
CACNA1A-236ENST00000637117 SETD1BQ9UPS6 1966 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-236ENST00000637117 ZNF518AQ6AHZ1 1483 aa15.18■□□□□ 0.02
CACNA1A-236ENST00000637117 PREX1Q8TCU6 1659 aa15.18■□□□□ 0.02
CACNA1A-236ENST00000637117 MYO5CQ9NQX4 1742 aa15.17■□□□□ 0.02
CACNA1A-236ENST00000637117 TROQ12816 1431 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-236ENST00000637117 UHRF1BP1Q6BDS2 1440 aa15.16■□□□□ 0.02
CACNA1A-236ENST00000637117 DISP3Q9P2K9 1392 aa15.15■□□□□ 0.02
CACNA1A-236ENST00000637117 ABCB7O75027 752 aa15.15■□□□□ 0.02
CACNA1A-236ENST00000637117 ILDR2Q71H61 639 aa15.15■□□□□ 0.02
CACNA1A-236ENST00000637117 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
CACNA1A-236ENST00000637117 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
CACNA1A-236ENST00000637117 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-236ENST00000637117 ARHGAP5Q13017 1502 aa15.15■□□□□ 0.02
CACNA1A-236ENST00000637117 STRCQ7RTU9 1775 aa15.15■□□□□ 0.02
CACNA1A-236ENST00000637117 CLIP1P30622 1438 aa15.14■□□□□ 0.01
CACNA1A-236ENST00000637117 ARHGAP35Q9NRY4 1499 aa15.14■□□□□ 0.01
CACNA1A-236ENST00000637117 KIF14Q15058 1648 aa15.14■□□□□ 0.01
CACNA1A-236ENST00000637117 KDM5CP41229 1560 aa15.12■□□□□ 0.01
CACNA1A-236ENST00000637117 VASPP50552 380 aaPredicted RBP15.12■□□□□ 0.01
CACNA1A-236ENST00000637117 MLH3Q9UHC1 1453 aa15.11■□□□□ 0.01
CACNA1A-236ENST00000637117 PTPRTO14522 1441 aa15.1■□□□□ 0.01
CACNA1A-236ENST00000637117 SOCS7O14512 581 aa15.1■□□□□ 0.01
CACNA1A-236ENST00000637117 DIP2CQ9Y2E4 1556 aa15.1■□□□□ 0.01
CACNA1A-236ENST00000637117 TRAPPC8Q9Y2L5 1435 aa15.09■□□□□ 0.01
CACNA1A-236ENST00000637117 REREQ9P2R6 1566 aa15.08■□□□□ 0
CACNA1A-236ENST00000637117 AGLP35573 1532 aa15.07■□□□□ 0
CACNA1A-236ENST00000637117 C3P01024 1663 aa15.06■□□□□ 0
CACNA1A-236ENST00000637117 CDC42BPBQ9Y5S2 1711 aa15.06■□□□□ 0
CACNA1A-236ENST00000637117 ABCA6Q8N139 1617 aa15.05■□□□□ -0
CACNA1A-236ENST00000637117 LRRIQ1Q96JM4 1722 aa15.03■□□□□ -0
CACNA1A-236ENST00000637117 CNTLNQ9NXG0 1405 aa15.03■□□□□ -0
CACNA1A-236ENST00000637117 ZNF777Q9ULD5 760 aaPredicted RBP15.03■□□□□ -0
CACNA1A-236ENST00000637117 NCOA1Q15788 1441 aa15.02■□□□□ -0
CACNA1A-236ENST00000637117 LTBP4Q8N2S1 1624 aa15.02□□□□□ -0.01
CACNA1A-236ENST00000637117 ABCC1P33527 1531 aa15.02□□□□□ -0.01
CACNA1A-236ENST00000637117 ZMYM3Q14202 1370 aa15.01□□□□□ -0.01
CACNA1A-236ENST00000637117 CASKIN1Q8WXD9 1431 aa15□□□□□ -0.01
CACNA1A-236ENST00000637117 PREX2Q70Z35 1606 aa15□□□□□ -0.01
CACNA1A-236ENST00000637117 NCKAP5LQ9HCH0 1330 aa15□□□□□ -0.01
CACNA1A-236ENST00000637117 KIDINS220Q9ULH0 1771 aa15□□□□□ -0.01
CACNA1A-236ENST00000637117 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms