RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-223ENST00000637033 DEKP35659 375 aaKnown RBP17.71■□□□□ 0.43
CHRNA7-223ENST00000637033 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
CHRNA7-223ENST00000637033 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
CHRNA7-223ENST00000637033 FBLN2P98095 1184 aa17.7■□□□□ 0.42
CHRNA7-223ENST00000637033 LRRIQ1Q96JM4 1722 aa17.69■□□□□ 0.42
CHRNA7-223ENST00000637033 TMC1Q8TDI8 760 aa17.69■□□□□ 0.42
CHRNA7-223ENST00000637033 PKD2Q13563 968 aa17.66■□□□□ 0.42
CHRNA7-223ENST00000637033 NCOA1Q15788 1441 aa17.66■□□□□ 0.42
CHRNA7-223ENST00000637033 PDS5BQ9NTI5 1447 aa17.66■□□□□ 0.42
CHRNA7-223ENST00000637033 NOP58Q9Y2X3 529 aaKnown RBP17.66■□□□□ 0.42
CHRNA7-223ENST00000637033 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
CHRNA7-223ENST00000637033 SUPT6HQ7KZ85 1726 aaKnown RBP17.65■□□□□ 0.42
CHRNA7-223ENST00000637033 SKAP1Q86WV1 359 aa17.64■□□□□ 0.42
CHRNA7-223ENST00000637033 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.42
CHRNA7-223ENST00000637033 ANKRD30BQ9BXX2 1392 aa17.64■□□□□ 0.41
CHRNA7-223ENST00000637033 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
CHRNA7-223ENST00000637033 UGGT2Q9NYU1 1516 aa17.63■□□□□ 0.41
CHRNA7-223ENST00000637033 EHBP1L1Q8N3D4 1523 aa17.61■□□□□ 0.41
CHRNA7-223ENST00000637033 CARD11Q9BXL7 1154 aa17.6■□□□□ 0.41
CHRNA7-223ENST00000637033 NUDCQ9Y266 331 aa17.6■□□□□ 0.41
CHRNA7-223ENST00000637033 EPRSP07814 1512 aaKnown RBP17.6■□□□□ 0.41
CHRNA7-223ENST00000637033 CUL7Q14999 1698 aa17.59■□□□□ 0.41
CHRNA7-223ENST00000637033 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
CHRNA7-223ENST00000637033 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
CHRNA7-223ENST00000637033 USP47Q96K76 1375 aa17.59■□□□□ 0.41
CHRNA7-223ENST00000637033 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.41
CHRNA7-223ENST00000637033 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
CHRNA7-223ENST00000637033 ERICH6BQ5W0A0 696 aa17.57■□□□□ 0.4
CHRNA7-223ENST00000637033 DCAF11Q8TEB1 546 aa17.57■□□□□ 0.4
CHRNA7-223ENST00000637033 EXOC6Q8TAG9 804 aa17.56■□□□□ 0.4
CHRNA7-223ENST00000637033 PLIN1O60240 522 aa17.56■□□□□ 0.4
CHRNA7-223ENST00000637033 LAS1LQ9Y4W2 734 aaKnown RBP17.56■□□□□ 0.4
CHRNA7-223ENST00000637033 ABCC5O15440 1437 aa17.56■□□□□ 0.4
CHRNA7-223ENST00000637033 DAPK1P53355 1430 aa17.55■□□□□ 0.4
CHRNA7-223ENST00000637033 SAMD9Q5K651 1589 aa17.54■□□□□ 0.4
CHRNA7-223ENST00000637033 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
CHRNA7-223ENST00000637033 PNISRQ8TF01 805 aaKnown RBP17.53■□□□□ 0.4
CHRNA7-223ENST00000637033 RPRD2Q5VT52 1461 aaKnown RBP17.53■□□□□ 0.4
CHRNA7-223ENST00000637033 PRG4Q92954 1404 aaPredicted RBP17.52■□□□□ 0.4
CHRNA7-223ENST00000637033 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.39
CHRNA7-223ENST00000637033 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
CHRNA7-223ENST00000637033 RTN4Q9NQC3 1192 aaKnown RBP17.51■□□□□ 0.39
CHRNA7-223ENST00000637033 DHX29Q7Z478 1369 aaKnown RBP17.51■□□□□ 0.39
CHRNA7-223ENST00000637033 SPATA31E1Q6ZUB1 1445 aa17.5■□□□□ 0.39
CHRNA7-223ENST00000637033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHRNA7-223ENST00000637033 TEX14Q8IWB6 1497 aa17.5■□□□□ 0.39
CHRNA7-223ENST00000637033 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
CHRNA7-223ENST00000637033 RTL5Q5HYW3 569 aaPredicted RBP17.48■□□□□ 0.39
CHRNA7-223ENST00000637033 TCOF1Q13428 1488 aaKnown RBP17.48■□□□□ 0.39
CHRNA7-223ENST00000637033 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
CHRNA7-223ENST00000637033 NUP155O75694 1391 aa17.47■□□□□ 0.39
CHRNA7-223ENST00000637033 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
CHRNA7-223ENST00000637033 HECW1Q76N89 1606 aa17.46■□□□□ 0.39
CHRNA7-223ENST00000637033 HNRNPMP52272 730 aaKnown RBP eCLIP17.46■□□□□ 0.39
CHRNA7-223ENST00000637033 SMG6Q86US8 1419 aaKnown RBP17.46■□□□□ 0.39
CHRNA7-223ENST00000637033 MIA2Q96PC5 1412 aa17.45■□□□□ 0.38
CHRNA7-223ENST00000637033 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
CHRNA7-223ENST00000637033 NBPF1Q3BBV0 1214 aa17.43■□□□□ 0.38
CHRNA7-223ENST00000637033 RCAN3Q9UKA8 241 aa17.43■□□□□ 0.38
CHRNA7-223ENST00000637033 SLC4A3P48751 1232 aa17.42■□□□□ 0.38
CHRNA7-223ENST00000637033 RRP1P56182 461 aaKnown RBP17.42■□□□□ 0.38
CHRNA7-223ENST00000637033 CHMP7Q8WUX9 453 aaPredicted RBP17.42■□□□□ 0.38
CHRNA7-223ENST00000637033 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
CHRNA7-223ENST00000637033 GCC2Q8IWJ2 1684 aa17.41■□□□□ 0.38
CHRNA7-223ENST00000637033 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
CHRNA7-223ENST00000637033 PZPP20742 1482 aa17.4■□□□□ 0.38
CHRNA7-223ENST00000637033 BCORL1Q5H9F3 1711 aa17.38■□□□□ 0.37
CHRNA7-223ENST00000637033 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
CHRNA7-223ENST00000637033 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
CHRNA7-223ENST00000637033 PLB1Q6P1J6 1458 aa17.37■□□□□ 0.37
CHRNA7-223ENST00000637033 PDE4AP27815 886 aa17.37■□□□□ 0.37
CHRNA7-223ENST00000637033 NUP153P49790 1475 aaKnown RBP17.36■□□□□ 0.37
CHRNA7-223ENST00000637033 IL27Q8NEV9 243 aa17.36■□□□□ 0.37
CHRNA7-223ENST00000637033 ROCK1Q13464 1354 aa17.36■□□□□ 0.37
CHRNA7-223ENST00000637033 NEFMP07197 916 aa17.36■□□□□ 0.37
CHRNA7-223ENST00000637033 ROCK2O75116 1388 aaKnown RBP17.36■□□□□ 0.37
CHRNA7-223ENST00000637033 KIAA1107Q9UPP5 1409 aa17.36■□□□□ 0.37
CHRNA7-223ENST00000637033 WDR62O43379 1518 aa17.36■□□□□ 0.37
CHRNA7-223ENST00000637033 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
CHRNA7-223ENST00000637033 C20orf194Q5TEA3 1177 aa17.34■□□□□ 0.37
CHRNA7-223ENST00000637033 ANKRD50Q9ULJ7 1429 aa17.34■□□□□ 0.37
CHRNA7-223ENST00000637033 PLEKHD1A6NEE1 506 aa17.34■□□□□ 0.37
CHRNA7-223ENST00000637033 CAMSAP2Q08AD1 1489 aa17.33■□□□□ 0.36
CHRNA7-223ENST00000637033 RNF123Q5XPI4 1314 aa17.33■□□□□ 0.36
CHRNA7-223ENST00000637033 CRBNQ96SW2 442 aa17.33■□□□□ 0.36
CHRNA7-223ENST00000637033 KIF15Q9NS87 1388 aa17.33■□□□□ 0.36
CHRNA7-223ENST00000637033 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.36
CHRNA7-223ENST00000637033 ANKRD30AQ9BXX3 1397 aa17.32■□□□□ 0.36
CHRNA7-223ENST00000637033 PANK3Q9H999 370 aa17.3■□□□□ 0.36
CHRNA7-223ENST00000637033 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
CHRNA7-223ENST00000637033 DISP1Q96F81 1524 aa17.28■□□□□ 0.36
CHRNA7-223ENST00000637033 NLRP13Q86W25 1043 aa17.28■□□□□ 0.36
CHRNA7-223ENST00000637033 GPATCH8Q9UKJ3 1502 aaKnown RBP17.27■□□□□ 0.36
CHRNA7-223ENST00000637033 RALBP1Q15311 655 aa17.27■□□□□ 0.36
CHRNA7-223ENST00000637033 TARBP1Q13395 1621 aaKnown RBP17.27■□□□□ 0.36
CHRNA7-223ENST00000637033 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
CHRNA7-223ENST00000637033 DNMT1P26358 1616 aaKnown RBP17.27■□□□□ 0.35
CHRNA7-223ENST00000637033 MYT1LQ9UL68 1186 aa17.25■□□□□ 0.35
CHRNA7-223ENST00000637033 RGS3P49796 1198 aa17.25■□□□□ 0.35
CHRNA7-223ENST00000637033 KTN1Q86UP2 1357 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms