RNA–Protein interactions for RNA: ENST00000636566.1

EFHC1-222, Transcript of EF-hand domain containing 1, human

TSL 4

Gene EFHC1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-222	ENST00000636566	IFT140	Q96RY7	1462 aa		7.91	□□□□□ -1.14
EFHC1-222	ENST00000636566	ABCA5	Q8WWZ7	1642 aa		7.9	□□□□□ -1.14
EFHC1-222	ENST00000636566	AQR	O60306	1485 aa	Known RBP eCLIP	7.9	□□□□□ -1.14
EFHC1-222	ENST00000636566	TAF7L	Q5H9L4	462 aa		7.9	□□□□□ -1.14
EFHC1-222	ENST00000636566	CTTNBP2	Q8WZ74	1663 aa		7.89	□□□□□ -1.15
EFHC1-222	ENST00000636566	PRR29	P0C7W0	189 aa		7.89	□□□□□ -1.15
EFHC1-222	ENST00000636566	CHADL	Q6NUI6	762 aa		7.89	□□□□□ -1.15
EFHC1-222	ENST00000636566	TARBP1	Q13395	1621 aa	Known RBP	7.89	□□□□□ -1.15
EFHC1-222	ENST00000636566	GRIN2B	Q13224	1484 aa		7.88	□□□□□ -1.15
EFHC1-222	ENST00000636566	KANK4	Q5T7N3	995 aa	Predicted RBP	7.88	□□□□□ -1.15
EFHC1-222	ENST00000636566	BCL11B	Q9C0K0	894 aa	Predicted RBP	7.88	□□□□□ -1.15
EFHC1-222	ENST00000636566	PBRM1	Q86U86	1689 aa		7.88	□□□□□ -1.15
EFHC1-222	ENST00000636566	FHOD3	Q2V2M9	1422 aa		7.87	□□□□□ -1.15
EFHC1-222	ENST00000636566	DEK	P35659	375 aa	Known RBP	7.87	□□□□□ -1.15
EFHC1-222	ENST00000636566	AAMP	Q13685	434 aa		7.87	□□□□□ -1.15
EFHC1-222	ENST00000636566	EFCAB5	A4FU69	1503 aa		7.87	□□□□□ -1.15
EFHC1-222	ENST00000636566	WDR62	O43379	1518 aa		7.87	□□□□□ -1.15
EFHC1-222	ENST00000636566	ITGAE	P38570	1179 aa		7.86	□□□□□ -1.15
EFHC1-222	ENST00000636566	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.86	□□□□□ -1.15
EFHC1-222	ENST00000636566	FMN1	Q68DA7	1419 aa		7.85	□□□□□ -1.15
EFHC1-222	ENST00000636566	TULP1	O00294	542 aa	Predicted RBP	7.84	□□□□□ -1.15
EFHC1-222	ENST00000636566	CLCN6	P51797	869 aa		7.84	□□□□□ -1.15
EFHC1-222	ENST00000636566	ZNF608	Q9ULD9	1512 aa	Predicted RBP	7.83	□□□□□ -1.16
EFHC1-222	ENST00000636566	FAM50A	Q14320	339 aa	Known RBP	7.83	□□□□□ -1.16
EFHC1-222	ENST00000636566	GLIPR1L2	Q4G1C9	344 aa		7.83	□□□□□ -1.16
EFHC1-222	ENST00000636566	TIAM1	Q13009	1591 aa		7.83	□□□□□ -1.16
EFHC1-222	ENST00000636566	POTEI	P0CG38	1075 aa		7.82	□□□□□ -1.16
EFHC1-222	ENST00000636566	ADAMTS12	P58397	1594 aa		7.82	□□□□□ -1.16
EFHC1-222	ENST00000636566	CASKIN1	Q8WXD9	1431 aa		7.82	□□□□□ -1.16
EFHC1-222	ENST00000636566	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	7.82	□□□□□ -1.16
EFHC1-222	ENST00000636566	MAP3K1	Q13233	1512 aa		7.82	□□□□□ -1.16
EFHC1-222	ENST00000636566	SNAPC4	Q5SXM2	1469 aa		7.81	□□□□□ -1.16
EFHC1-222	ENST00000636566	PCF11	O94913	1555 aa	Known RBP	7.81	□□□□□ -1.16
EFHC1-222	ENST00000636566	DIEXF	Q68CQ4	756 aa	Known RBP	7.81	□□□□□ -1.16
EFHC1-222	ENST00000636566	MTUS2	Q5JR59	1369 aa		7.81	□□□□□ -1.16
EFHC1-222	ENST00000636566	CCNB3	Q8WWL7	1395 aa		7.81	□□□□□ -1.16
EFHC1-222	ENST00000636566	FYCO1	Q9BQS8	1478 aa		7.81	□□□□□ -1.16
EFHC1-222	ENST00000636566	THOC2	Q8NI27	1593 aa	Known RBP	7.8	□□□□□ -1.16
EFHC1-222	ENST00000636566	RBM10	P98175	930 aa	Known RBP	7.8	□□□□□ -1.16
EFHC1-222	ENST00000636566	ZMYND15	Q9H091	742 aa		7.8	□□□□□ -1.16
EFHC1-222	ENST00000636566	RSPH6A	Q9H0K4	717 aa		7.8	□□□□□ -1.16
EFHC1-222	ENST00000636566	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.8	□□□□□ -1.16
EFHC1-222	ENST00000636566	LRRC9	Q6ZRR7	1453 aa		7.8	□□□□□ -1.16
EFHC1-222	ENST00000636566	EIF4G3	O43432	1585 aa	Known RBP	7.8	□□□□□ -1.16
EFHC1-222	ENST00000636566	IQGAP2	Q13576	1575 aa		7.8	□□□□□ -1.16
EFHC1-222	ENST00000636566	RRBP1	Q9P2E9	1410 aa	Known RBP	7.78	□□□□□ -1.16
EFHC1-222	ENST00000636566	CFAP43	Q8NDM7	1665 aa		7.77	□□□□□ -1.17
EFHC1-222	ENST00000636566	SAMD9	Q5K651	1589 aa		7.77	□□□□□ -1.17
EFHC1-222	ENST00000636566	MAGI1	Q96QZ7	1491 aa	Predicted RBP	7.77	□□□□□ -1.17
EFHC1-222	ENST00000636566	CD44	P16070	742 aa	Known RBP	7.77	□□□□□ -1.17
EFHC1-222	ENST00000636566	KIAA0586	Q9BVV6	1533 aa		7.77	□□□□□ -1.17
EFHC1-222	ENST00000636566	GRIN2A	Q12879	1464 aa		7.76	□□□□□ -1.17
EFHC1-222	ENST00000636566		A0A0U1RQG5	324 aa	Predicted RBP	7.76	□□□□□ -1.17
EFHC1-222	ENST00000636566	ZNF316	A6NFI3	1004 aa	Predicted RBP	7.76	□□□□□ -1.17
EFHC1-222	ENST00000636566	ARID3C	A6NKF2	412 aa		7.76	□□□□□ -1.17
EFHC1-222	ENST00000636566	BRD2	P25440	801 aa	Known RBP	7.76	□□□□□ -1.17
EFHC1-222	ENST00000636566	FARP1	Q9Y4F1	1045 aa	Predicted RBP	7.76	□□□□□ -1.17
EFHC1-222	ENST00000636566	SYNJ2	O15056	1496 aa		7.75	□□□□□ -1.17
EFHC1-222	ENST00000636566	AMER1	Q5JTC6	1135 aa	Predicted RBP	7.75	□□□□□ -1.17
EFHC1-222	ENST00000636566	RSPH4A	Q5TD94	716 aa		7.75	□□□□□ -1.17
EFHC1-222	ENST00000636566	CHMP4A	Q9BY43	222 aa		7.75	□□□□□ -1.17
EFHC1-222	ENST00000636566	NPM2	Q86SE8	214 aa	Known RBP	7.74	□□□□□ -1.17
EFHC1-222	ENST00000636566	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.74	□□□□□ -1.17
EFHC1-222	ENST00000636566	CARMIL2	Q6F5E8	1435 aa		7.74	□□□□□ -1.17
EFHC1-222	ENST00000636566	CCDC18	Q5T9S5	1454 aa		7.74	□□□□□ -1.17
EFHC1-222	ENST00000636566	HECW1	Q76N89	1606 aa		7.74	□□□□□ -1.17
EFHC1-222	ENST00000636566	PHLDB1	Q86UU1	1377 aa		7.73	□□□□□ -1.17
EFHC1-222	ENST00000636566	JPH4	Q96JJ6	628 aa		7.73	□□□□□ -1.17
EFHC1-222	ENST00000636566	RBM19	Q9Y4C8	960 aa	Known RBP	7.73	□□□□□ -1.17
EFHC1-222	ENST00000636566	FANCI	Q9NVI1	1328 aa		7.73	□□□□□ -1.17
EFHC1-222	ENST00000636566	UGGT2	Q9NYU1	1516 aa		7.73	□□□□□ -1.17
EFHC1-222	ENST00000636566	ZNF326	Q5BKZ1	582 aa	Known RBP	7.72	□□□□□ -1.17
EFHC1-222	ENST00000636566	STAG3	Q9UJ98	1225 aa		7.72	□□□□□ -1.17
EFHC1-222	ENST00000636566	SUPT6H	Q7KZ85	1726 aa	Known RBP	7.71	□□□□□ -1.18
EFHC1-222	ENST00000636566	EHBP1L1	Q8N3D4	1523 aa		7.71	□□□□□ -1.18
EFHC1-222	ENST00000636566	SETD5	Q9C0A6	1442 aa		7.7	□□□□□ -1.18
EFHC1-222	ENST00000636566	VSIG10	Q8N0Z9	540 aa		7.7	□□□□□ -1.18
EFHC1-222	ENST00000636566	KIAA0556	O60303	1618 aa		7.7	□□□□□ -1.18
EFHC1-222	ENST00000636566	FGD6	Q6ZV73	1430 aa		7.69	□□□□□ -1.18
EFHC1-222	ENST00000636566	NCOA2	Q15596	1464 aa		7.68	□□□□□ -1.18
EFHC1-222	ENST00000636566	EPRS	P07814	1512 aa	Known RBP	7.68	□□□□□ -1.18
EFHC1-222	ENST00000636566	CEP170	Q5SW79	1584 aa		7.68	□□□□□ -1.18
EFHC1-222	ENST00000636566	ZNF579	Q8NAF0	562 aa	Known RBP	7.68	□□□□□ -1.18
EFHC1-222	ENST00000636566	IL27	Q8NEV9	243 aa		7.68	□□□□□ -1.18
EFHC1-222	ENST00000636566	DHX57	Q6P158	1386 aa	Known RBP	7.68	□□□□□ -1.18
EFHC1-222	ENST00000636566	RAB3GAP2	Q9H2M9	1393 aa		7.68	□□□□□ -1.18
EFHC1-222	ENST00000636566	PLEKHD1	A6NEE1	506 aa		7.67	□□□□□ -1.18
EFHC1-222	ENST00000636566	DHX37	Q8IY37	1157 aa	Known RBP	7.67	□□□□□ -1.18
EFHC1-222	ENST00000636566	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	7.67	□□□□□ -1.18
EFHC1-222	ENST00000636566	NUP160	Q12769	1436 aa		7.67	□□□□□ -1.18
EFHC1-222	ENST00000636566	MYOM3	Q5VTT5	1437 aa		7.67	□□□□□ -1.18
EFHC1-222	ENST00000636566	CDK13	Q14004	1512 aa	Known RBP	7.67	□□□□□ -1.18
EFHC1-222	ENST00000636566	DISP1	Q96F81	1524 aa		7.67	□□□□□ -1.18
EFHC1-222	ENST00000636566	RAPGEF6	Q8TEU7	1601 aa		7.67	□□□□□ -1.18
EFHC1-222	ENST00000636566	DCBLD2	Q96PD2	775 aa		7.66	□□□□□ -1.18
EFHC1-222	ENST00000636566	LRRIQ1	Q96JM4	1722 aa		7.66	□□□□□ -1.18
EFHC1-222	ENST00000636566	CHIC2	Q9UKJ5	165 aa		7.65	□□□□□ -1.18
EFHC1-222	ENST00000636566	PRG4	Q92954	1404 aa	Predicted RBP	7.64	□□□□□ -1.19
EFHC1-222	ENST00000636566	TRIM52	Q96A61	297 aa		7.64	□□□□□ -1.19
EFHC1-222	ENST00000636566	ZNF777	Q9ULD5	760 aa	Predicted RBP	7.64	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms