RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 SOX12O15370 315 aa10.04□□□□□ -0.8
SMARCA2-252ENST00000636559 ROCK2O75116 1388 aaKnown RBP10.04□□□□□ -0.8
SMARCA2-252ENST00000636559 KIF3BO15066 747 aa10.04□□□□□ -0.8
SMARCA2-252ENST00000636559 MS4A1P11836 297 aa10.03□□□□□ -0.8
SMARCA2-252ENST00000636559 RSPH4AQ5TD94 716 aa10.03□□□□□ -0.8
SMARCA2-252ENST00000636559 CHMP4BQ9H444 224 aaKnown RBP10.03□□□□□ -0.8
SMARCA2-252ENST00000636559 HDGFL2Q7Z4V5 671 aaPredicted RBP10.03□□□□□ -0.8
SMARCA2-252ENST00000636559 SPAG9O60271 1321 aaKnown RBP10.02□□□□□ -0.8
SMARCA2-252ENST00000636559 EIF5BO60841 1220 aaKnown RBP10.02□□□□□ -0.81
SMARCA2-252ENST00000636559 PPP4R2Q9NY27 417 aa10.02□□□□□ -0.81
SMARCA2-252ENST00000636559 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-252ENST00000636559 CCER2I3L3R5 266 aa10.01□□□□□ -0.81
SMARCA2-252ENST00000636559 NCLP19338 710 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-252ENST00000636559 NPHP1O15259 732 aa9.99□□□□□ -0.81
SMARCA2-252ENST00000636559 RGS3P49796 1198 aa9.99□□□□□ -0.81
SMARCA2-252ENST00000636559 EIF3AQ14152 1382 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-252ENST00000636559 RUSC2Q8N2Y8 1516 aa9.99□□□□□ -0.81
SMARCA2-252ENST00000636559 GOLGA6L22H0YM25 854 aa9.98□□□□□ -0.81
SMARCA2-252ENST00000636559 WASHC2CQ9Y4E1 1318 aa9.98□□□□□ -0.81
SMARCA2-252ENST00000636559 OS9Q13438 667 aaPredicted RBP9.98□□□□□ -0.81
SMARCA2-252ENST00000636559 RTF1Q92541 710 aaKnown RBP9.97□□□□□ -0.81
SMARCA2-252ENST00000636559 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
SMARCA2-252ENST00000636559 PTPRGP23470 1445 aa9.97□□□□□ -0.81
SMARCA2-252ENST00000636559 L3MBTL2Q969R5 705 aa9.96□□□□□ -0.81
SMARCA2-252ENST00000636559 RALBP1Q15311 655 aa9.96□□□□□ -0.82
SMARCA2-252ENST00000636559 FGD5Q6ZNL6 1462 aa9.95□□□□□ -0.82
SMARCA2-252ENST00000636559 ANP32EQ9BTT0 268 aa9.95□□□□□ -0.82
SMARCA2-252ENST00000636559 GAPVD1Q14C86 1478 aa9.95□□□□□ -0.82
SMARCA2-252ENST00000636559 EID1Q9Y6B2 187 aa9.95□□□□□ -0.82
SMARCA2-252ENST00000636559 U2AF1L5P0DN76 240 aaPredicted RBP9.94□□□□□ -0.82
SMARCA2-252ENST00000636559 U2AF1Q01081 240 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCA2-252ENST00000636559 B4GALNT3Q6L9W6 998 aa9.94□□□□□ -0.82
SMARCA2-252ENST00000636559 NUTM2DQ5VT03 806 aaPredicted RBP9.93□□□□□ -0.82
SMARCA2-252ENST00000636559 TERF2IPQ9NYB0 399 aa9.92□□□□□ -0.82
SMARCA2-252ENST00000636559 CDK11BP21127 795 aaKnown RBP9.92□□□□□ -0.82
SMARCA2-252ENST00000636559 CALD1Q05682 793 aaKnown RBP9.92□□□□□ -0.82
SMARCA2-252ENST00000636559 OSCARQ8IYS5 282 aa9.91□□□□□ -0.82
SMARCA2-252ENST00000636559 RAD54L2Q9Y4B4 1467 aa9.91□□□□□ -0.82
SMARCA2-252ENST00000636559 IGF1RP08069 1367 aa9.91□□□□□ -0.82
SMARCA2-252ENST00000636559 CSB-PGBD3P0DP91 1061 aa9.91□□□□□ -0.82
SMARCA2-252ENST00000636559 ZRSR1Q15695 479 aaKnown RBP9.91□□□□□ -0.82
SMARCA2-252ENST00000636559 GOLGA2Q08379 1002 aa9.91□□□□□ -0.82
SMARCA2-252ENST00000636559 IPO8O15397 1037 aaKnown RBP9.9□□□□□ -0.82
SMARCA2-252ENST00000636559 KCNJ4P48050 445 aa9.9□□□□□ -0.82
SMARCA2-252ENST00000636559 CCDC144AA2RUR9 1427 aa9.9□□□□□ -0.82
SMARCA2-252ENST00000636559 CYB5RLQ6IPT4 315 aa9.9□□□□□ -0.82
SMARCA2-252ENST00000636559 NCAPD3P42695 1498 aa9.9□□□□□ -0.83
SMARCA2-252ENST00000636559 FGD1P98174 961 aa9.89□□□□□ -0.83
SMARCA2-252ENST00000636559 TRIM44Q96DX7 344 aaPredicted RBP9.88□□□□□ -0.83
SMARCA2-252ENST00000636559 HSP90AB1P08238 724 aaKnown RBP9.88□□□□□ -0.83
SMARCA2-252ENST00000636559 TPRNQ4KMQ1 711 aa9.88□□□□□ -0.83
SMARCA2-252ENST00000636559 TRAK1Q9UPV9 953 aa9.88□□□□□ -0.83
SMARCA2-252ENST00000636559 NGDNQ8NEJ9 315 aaKnown RBP9.88□□□□□ -0.83
SMARCA2-252ENST00000636559 UACAQ9BZF9 1416 aa9.87□□□□□ -0.83
SMARCA2-252ENST00000636559 RCAN3Q9UKA8 241 aa9.87□□□□□ -0.83
SMARCA2-252ENST00000636559 DHX57Q6P158 1386 aaKnown RBP9.85□□□□□ -0.83
SMARCA2-252ENST00000636559 NLRP13Q86W25 1043 aa9.85□□□□□ -0.83
SMARCA2-252ENST00000636559 TAOK2Q9UL54 1235 aa9.85□□□□□ -0.83
SMARCA2-252ENST00000636559 NAP1L2Q9ULW6 460 aaPredicted RBP9.85□□□□□ -0.83
SMARCA2-252ENST00000636559 AQRO60306 1485 aaKnown RBP eCLIP9.85□□□□□ -0.831e-10■■■■■ 53.5
SMARCA2-252ENST00000636559 ST20-MTHFSA0A0A6YYL1 179 aa9.84□□□□□ -0.83
SMARCA2-252ENST00000636559 VGFO15240 615 aaPredicted RBP9.84□□□□□ -0.83
SMARCA2-252ENST00000636559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMARCA2-252ENST00000636559 CHMP4AQ9BY43 222 aa9.84□□□□□ -0.83
SMARCA2-252ENST00000636559 PRDM2Q13029 1718 aa9.84□□□□□ -0.83
SMARCA2-252ENST00000636559 ITPRIPQ8IWB1 547 aa9.84□□□□□ -0.83
SMARCA2-252ENST00000636559 CFAP44Q96MT7 982 aa9.84□□□□□ -0.83
SMARCA2-252ENST00000636559 MCCP23508 829 aa9.84□□□□□ -0.83
SMARCA2-252ENST00000636559 NUTM2FA1L443 756 aa9.84□□□□□ -0.83
SMARCA2-252ENST00000636559 MYOM3Q5VTT5 1437 aa9.83□□□□□ -0.84
SMARCA2-252ENST00000636559 PTMAP06454 111 aaKnown RBP9.83□□□□□ -0.84
SMARCA2-252ENST00000636559 AMPHP49418 695 aa9.83□□□□□ -0.84
SMARCA2-252ENST00000636559 APBB1O00213 710 aa9.83□□□□□ -0.84
SMARCA2-252ENST00000636559 HSCBQ8IWL3 235 aa9.83□□□□□ -0.84
SMARCA2-252ENST00000636559 STK31Q9BXU1 1019 aa9.83□□□□□ -0.84
SMARCA2-252ENST00000636559 KIF15Q9NS87 1388 aa9.83□□□□□ -0.84
SMARCA2-252ENST00000636559 NOP58Q9Y2X3 529 aaKnown RBP9.83□□□□□ -0.84
SMARCA2-252ENST00000636559 ZNF330Q9Y3S2 320 aaPredicted RBP9.83□□□□□ -0.84
SMARCA2-252ENST00000636559 CCDC146Q8IYE0 955 aa9.83□□□□□ -0.84
SMARCA2-252ENST00000636559 RWDD1Q9H446 243 aaPredicted RBP9.82□□□□□ -0.84
SMARCA2-252ENST00000636559 CUX1P39880 1505 aa9.82□□□□□ -0.84
SMARCA2-252ENST00000636559 PHLDB1Q86UU1 1377 aa9.82□□□□□ -0.84
SMARCA2-252ENST00000636559 ERICH6BQ5W0A0 696 aa9.81□□□□□ -0.84
SMARCA2-252ENST00000636559 PANK3Q9H999 370 aa9.81□□□□□ -0.84
SMARCA2-252ENST00000636559 SMC4Q9NTJ3 1288 aa9.81□□□□□ -0.84
SMARCA2-252ENST00000636559 LMOD3Q0VAK6 560 aa9.81□□□□□ -0.84
SMARCA2-252ENST00000636559 CCDC9Q9Y3X0 531 aaKnown RBP9.81□□□□□ -0.84
SMARCA2-252ENST00000636559 EVC2Q86UK5 1308 aa9.8□□□□□ -0.84
SMARCA2-252ENST00000636559 GRIN2BQ13224 1484 aa9.8□□□□□ -0.84
SMARCA2-252ENST00000636559 LTV1Q96GA3 475 aaPredicted RBP9.8□□□□□ -0.84
SMARCA2-252ENST00000636559 MYBBP1AQ9BQG0 1328 aaKnown RBP9.8□□□□□ -0.84
SMARCA2-252ENST00000636559 FGD6Q6ZV73 1430 aa9.8□□□□□ -0.84
SMARCA2-252ENST00000636559 FAM69CQ0P6D2 419 aa9.79□□□□□ -0.84
SMARCA2-252ENST00000636559 PDE3BQ13370 1112 aa9.79□□□□□ -0.84
SMARCA2-252ENST00000636559 USP47Q96K76 1375 aa9.79□□□□□ -0.84
SMARCA2-252ENST00000636559 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
SMARCA2-252ENST00000636559 KIAA1211Q6ZU35 1233 aa9.79□□□□□ -0.84
SMARCA2-252ENST00000636559 KIF21BO75037 1637 aa9.78□□□□□ -0.84
SMARCA2-252ENST00000636559 ZNF644Q9H582 1327 aaPredicted RBP9.78□□□□□ -0.84
SMARCA2-252ENST00000636559 PMFBP1Q8TBY8 1022 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms