RNA–Protein interactions for RNA: ENST00000636146.1

SYNGAP1-212, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-212ENST00000636146 PLCH2O75038 1416 aa12.7□□□□□ -0.38
SYNGAP1-212ENST00000636146 RIMS1Q86UR5 1692 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-212ENST00000636146 MAGI2Q86UL8 1455 aa12.68□□□□□ -0.38
SYNGAP1-212ENST00000636146 ARHGAP35Q9NRY4 1499 aa12.67□□□□□ -0.38
SYNGAP1-212ENST00000636146 KIF14Q15058 1648 aa12.67□□□□□ -0.38
SYNGAP1-212ENST00000636146 MYO5CQ9NQX4 1742 aa12.67□□□□□ -0.38
SYNGAP1-212ENST00000636146 ARHGAP5Q13017 1502 aa12.67□□□□□ -0.38
SYNGAP1-212ENST00000636146 ZMYM4Q5VZL5 1548 aa12.67□□□□□ -0.38
SYNGAP1-212ENST00000636146 YEATS2Q9ULM3 1422 aa12.65□□□□□ -0.38
SYNGAP1-212ENST00000636146 ESF1Q9H501 851 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-212ENST00000636146 PCF11O94913 1555 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-212ENST00000636146 TROQ12816 1431 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-212ENST00000636146 FBXO41Q8TF61 875 aa12.63□□□□□ -0.39
SYNGAP1-212ENST00000636146 ATP10AO60312 1499 aa12.62□□□□□ -0.39
SYNGAP1-212ENST00000636146 HSPA2P54652 639 aa12.62□□□□□ -0.39
SYNGAP1-212ENST00000636146 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
SYNGAP1-212ENST00000636146 CCDC18Q5T9S5 1454 aa12.61□□□□□ -0.39
SYNGAP1-212ENST00000636146 ZNF518AQ6AHZ1 1483 aa12.61□□□□□ -0.39
SYNGAP1-212ENST00000636146 FER1L4A9Z1Z3 1794 aa12.61□□□□□ -0.39
SYNGAP1-212ENST00000636146 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
SYNGAP1-212ENST00000636146 AFAP1Q8N556 730 aa12.6□□□□□ -0.39
SYNGAP1-212ENST00000636146 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-212ENST00000636146 LOC105371045A0A1W2PR82 267 aa12.58□□□□□ -0.4
SYNGAP1-212ENST00000636146 CASKIN1Q8WXD9 1431 aa12.58□□□□□ -0.4
SYNGAP1-212ENST00000636146 CEBPAP49715 358 aaPredicted RBP12.55□□□□□ -0.4
SYNGAP1-212ENST00000636146 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
SYNGAP1-212ENST00000636146 SIGLEC1Q9BZZ2 1709 aa12.54□□□□□ -0.4
SYNGAP1-212ENST00000636146 LRRIQ1Q96JM4 1722 aa12.54□□□□□ -0.4
SYNGAP1-212ENST00000636146 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
SYNGAP1-212ENST00000636146 CDC42BPBQ9Y5S2 1711 aa12.53□□□□□ -0.4
SYNGAP1-212ENST00000636146 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
SYNGAP1-212ENST00000636146 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.4
SYNGAP1-212ENST00000636146 PREX2Q70Z35 1606 aa12.52□□□□□ -0.4
SYNGAP1-212ENST00000636146 KDM5CP41229 1560 aa12.52□□□□□ -0.41
SYNGAP1-212ENST00000636146 UHRF1BP1Q6BDS2 1440 aa12.51□□□□□ -0.41
SYNGAP1-212ENST00000636146 MLH3Q9UHC1 1453 aa12.51□□□□□ -0.41
SYNGAP1-212ENST00000636146 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
SYNGAP1-212ENST00000636146 CFDP1Q9UEE9 299 aaPredicted RBP12.5□□□□□ -0.41
SYNGAP1-212ENST00000636146 ABCC1P33527 1531 aa12.5□□□□□ -0.41
SYNGAP1-212ENST00000636146 DIP2CQ9Y2E4 1556 aa12.5□□□□□ -0.41
SYNGAP1-212ENST00000636146 TRAPPC8Q9Y2L5 1435 aa12.49□□□□□ -0.41
SYNGAP1-212ENST00000636146 MTUS2Q5JR59 1369 aa12.49□□□□□ -0.41
SYNGAP1-212ENST00000636146 CCNB3Q8WWL7 1395 aa12.49□□□□□ -0.41
SYNGAP1-212ENST00000636146 SPAG9O60271 1321 aaKnown RBP12.49□□□□□ -0.41
SYNGAP1-212ENST00000636146 CERKQ8TCT0 537 aa12.49□□□□□ -0.41
SYNGAP1-212ENST00000636146 ITSN2Q9NZM3 1697 aa12.48□□□□□ -0.41
SYNGAP1-212ENST00000636146 HNRNPMP52272 730 aaKnown RBP eCLIP12.48□□□□□ -0.41
SYNGAP1-212ENST00000636146 CDC42BPAQ5VT25 1732 aa12.48□□□□□ -0.41
SYNGAP1-212ENST00000636146 ABCA6Q8N139 1617 aa12.48□□□□□ -0.41
SYNGAP1-212ENST00000636146 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
SYNGAP1-212ENST00000636146 PLEKHH2Q8IVE3 1493 aa12.46□□□□□ -0.42
SYNGAP1-212ENST00000636146 CNTLNQ9NXG0 1405 aa12.45□□□□□ -0.42
SYNGAP1-212ENST00000636146 AGLP35573 1532 aa12.44□□□□□ -0.42
SYNGAP1-212ENST00000636146 SYCP2Q9BX26 1530 aa12.44□□□□□ -0.42
SYNGAP1-212ENST00000636146 SETD1BQ9UPS6 1966 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-212ENST00000636146 GPATCH8Q9UKJ3 1502 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-212ENST00000636146 KIDINS220Q9ULH0 1771 aa12.43□□□□□ -0.42
SYNGAP1-212ENST00000636146 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
SYNGAP1-212ENST00000636146 C3P01024 1663 aa12.42□□□□□ -0.42
SYNGAP1-212ENST00000636146 GGT6Q6P531 493 aa12.42□□□□□ -0.42
SYNGAP1-212ENST00000636146 SUPT6HQ7KZ85 1726 aaKnown RBP12.41□□□□□ -0.42
SYNGAP1-212ENST00000636146 KIAA1107Q9UPP5 1409 aa12.41□□□□□ -0.42
SYNGAP1-212ENST00000636146 VPS8Q8N3P4 1428 aa12.4□□□□□ -0.42
SYNGAP1-212ENST00000636146 ATP7AQ04656 1500 aa12.4□□□□□ -0.42
SYNGAP1-212ENST00000636146 ZMYM3Q14202 1370 aa12.39□□□□□ -0.43
SYNGAP1-212ENST00000636146 A2MP01023 1474 aa12.38□□□□□ -0.43
SYNGAP1-212ENST00000636146 EHBP1L1Q8N3D4 1523 aa12.37□□□□□ -0.43
SYNGAP1-212ENST00000636146 STRCQ7RTU9 1775 aa12.36□□□□□ -0.43
SYNGAP1-212ENST00000636146 PTPRTO14522 1441 aa12.36□□□□□ -0.43
SYNGAP1-212ENST00000636146 NPATQ14207 1427 aa12.36□□□□□ -0.43
SYNGAP1-212ENST00000636146 ZNF644Q9H582 1327 aaPredicted RBP12.36□□□□□ -0.43
SYNGAP1-212ENST00000636146 MROH2AA6NES4 1674 aa12.35□□□□□ -0.43
SYNGAP1-212ENST00000636146 PPP6R1Q9UPN7 881 aa12.35□□□□□ -0.43
SYNGAP1-212ENST00000636146 CLTCQ00610 1675 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-212ENST00000636146 ADGBQ8N7X0 1667 aa12.34□□□□□ -0.43
SYNGAP1-212ENST00000636146 INO80Q9ULG1 1556 aaPredicted RBP12.34□□□□□ -0.43
SYNGAP1-212ENST00000636146 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
SYNGAP1-212ENST00000636146 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
SYNGAP1-212ENST00000636146 RSPH4AQ5TD94 716 aa12.33□□□□□ -0.44
SYNGAP1-212ENST00000636146 TIAM1Q13009 1591 aa12.33□□□□□ -0.44
SYNGAP1-212ENST00000636146 CAMSAP1Q5T5Y3 1602 aa12.33□□□□□ -0.44
SYNGAP1-212ENST00000636146 KIF3BO15066 747 aa12.32□□□□□ -0.44
SYNGAP1-212ENST00000636146 NCOA1Q15788 1441 aa12.31□□□□□ -0.44
SYNGAP1-212ENST00000636146 PKD2Q13563 968 aa12.31□□□□□ -0.44
SYNGAP1-212ENST00000636146 NCKAP5LQ9HCH0 1330 aa12.31□□□□□ -0.44
SYNGAP1-212ENST00000636146 RTEL1-TNFRSF6BF6WH68 1400 aa12.3□□□□□ -0.44
SYNGAP1-212ENST00000636146 WASHC2CQ9Y4E1 1318 aa12.3□□□□□ -0.44
SYNGAP1-212ENST00000636146 PLXNC1O60486 1568 aa12.3□□□□□ -0.44
SYNGAP1-212ENST00000636146 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
SYNGAP1-212ENST00000636146 CCDC141Q6ZP82 1450 aa12.29□□□□□ -0.44
SYNGAP1-212ENST00000636146 MAP3K1Q13233 1512 aa12.29□□□□□ -0.44
SYNGAP1-212ENST00000636146 APLP2Q06481 763 aa12.29□□□□□ -0.44
SYNGAP1-212ENST00000636146 DHX29Q7Z478 1369 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-212ENST00000636146 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
SYNGAP1-212ENST00000636146 MYO3AQ8NEV4 1616 aa12.28□□□□□ -0.44
SYNGAP1-212ENST00000636146 PTPRKQ15262 1439 aa12.28□□□□□ -0.44
SYNGAP1-212ENST00000636146 CAMSAP2Q08AD1 1489 aa12.27□□□□□ -0.44
SYNGAP1-212ENST00000636146 MBD5Q9P267 1494 aa12.27□□□□□ -0.44
SYNGAP1-212ENST00000636146 CEP170BQ9Y4F5 1589 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-212ENST00000636146 UBAP1LF5GYI3 381 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms