RNA–Protein interactions for RNA: ENST00000635888.1

CPT2-204, Transcript of carnitine palmitoyltransferase 2, humanhuman

TSL 5

Gene CPT2, Length 2,889 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT2-204ENST00000635888 NAIPQ13075 1403 aa22.53■■□□□ 1.2
CPT2-204ENST00000635888 LRRIQ1Q96JM4 1722 aa22.53■■□□□ 1.2
CPT2-204ENST00000635888 FANCIQ9NVI1 1328 aa22.51■■□□□ 1.19
CPT2-204ENST00000635888 PTPN23Q9H3S7 1636 aa22.5■■□□□ 1.19
CPT2-204ENST00000635888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.49■■□□□ 1.19
CPT2-204ENST00000635888 KDM5BQ9UGL1 1544 aa22.48■■□□□ 1.19
CPT2-204ENST00000635888 EIF4G2P78344 907 aaKnown RBP eCLIP22.48■■□□□ 1.19
CPT2-204ENST00000635888 MRS2Q9HD23 443 aa22.48■■□□□ 1.19
CPT2-204ENST00000635888 PPP4R2Q9NY27 417 aa22.46■■□□□ 1.19
CPT2-204ENST00000635888 NCOA2Q15596 1464 aa22.45■■□□□ 1.18
CPT2-204ENST00000635888 L3MBTL2Q969R5 705 aa22.45■■□□□ 1.18
CPT2-204ENST00000635888 CDK13Q14004 1512 aaKnown RBP22.44■■□□□ 1.18
CPT2-204ENST00000635888 PRG4Q92954 1404 aaPredicted RBP22.42■■□□□ 1.18
CPT2-204ENST00000635888 PLB1Q6P1J6 1458 aa22.42■■□□□ 1.18
CPT2-204ENST00000635888 PRKRIP1Q9H875 184 aaPredicted RBP22.41■■□□□ 1.18
CPT2-204ENST00000635888 MYOM3Q5VTT5 1437 aa22.41■■□□□ 1.18
CPT2-204ENST00000635888 POLR3GLQ9BT43 218 aa22.4■■□□□ 1.18
CPT2-204ENST00000635888 CARMIL2Q6F5E8 1435 aa22.4■■□□□ 1.18
CPT2-204ENST00000635888 MAGI3Q5TCQ9 1506 aa22.39■■□□□ 1.18
CPT2-204ENST00000635888 EPRSP07814 1512 aaKnown RBP22.38■■□□□ 1.17
CPT2-204ENST00000635888 HECW1Q76N89 1606 aa22.37■■□□□ 1.17
CPT2-204ENST00000635888 MPHOSPH9Q99550 1183 aa22.37■■□□□ 1.17
CPT2-204ENST00000635888 ERCC6L2Q5T890 1561 aa22.36■■□□□ 1.17
CPT2-204ENST00000635888 CNTLNQ9NXG0 1405 aa22.36■■□□□ 1.17
CPT2-204ENST00000635888 DENND4BO75064 1496 aaPredicted RBP22.36■■□□□ 1.17
CPT2-204ENST00000635888 NUP153P49790 1475 aaKnown RBP22.36■■□□□ 1.17
CPT2-204ENST00000635888 NBR1Q14596 966 aa22.36■■□□□ 1.17
CPT2-204ENST00000635888 NBPF8Q3BBV2 869 aa22.36■■□□□ 1.17
CPT2-204ENST00000635888 CCDC7Q96M83 1385 aa22.33■■□□□ 1.16
CPT2-204ENST00000635888 KDM6BO15054 1643 aa22.32■■□□□ 1.16
CPT2-204ENST00000635888 RAPGEF6Q8TEU7 1601 aa22.32■■□□□ 1.16
CPT2-204ENST00000635888 PAK3O75914 559 aaPredicted RBP22.3■■□□□ 1.16
CPT2-204ENST00000635888 DEKP35659 375 aaKnown RBP22.28■■□□□ 1.16
CPT2-204ENST00000635888 ZBED9Q6R2W3 1325 aa22.28■■□□□ 1.16
CPT2-204ENST00000635888 ZNF326Q5BKZ1 582 aaKnown RBP22.27■■□□□ 1.16
CPT2-204ENST00000635888 PTPRGP23470 1445 aa22.27■■□□□ 1.16
CPT2-204ENST00000635888 KIF7Q2M1P5 1343 aa22.27■■□□□ 1.16
CPT2-204ENST00000635888 AKNAQ7Z591 1439 aa22.26■■□□□ 1.15
CPT2-204ENST00000635888 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
CPT2-204ENST00000635888 SHROOM2Q13796 1616 aa22.25■■□□□ 1.15
CPT2-204ENST00000635888 ERICH6BQ5W0A0 696 aa22.24■■□□□ 1.15
CPT2-204ENST00000635888 EHBP1L1Q8N3D4 1523 aa22.24■■□□□ 1.15
CPT2-204ENST00000635888 NCOA1Q15788 1441 aa22.23■■□□□ 1.15
CPT2-204ENST00000635888 SUPT6HQ7KZ85 1726 aaKnown RBP22.21■■□□□ 1.15
CPT2-204ENST00000635888 NOP58Q9Y2X3 529 aaKnown RBP22.21■■□□□ 1.15
CPT2-204ENST00000635888 ABCA8O94911 1581 aa22.19■■□□□ 1.14
CPT2-204ENST00000635888 ZNF644Q9H582 1327 aaPredicted RBP22.19■■□□□ 1.14
CPT2-204ENST00000635888 SLC4A1APQ9BWU0 796 aaKnown RBP22.18■■□□□ 1.14
CPT2-204ENST00000635888 CCDC136Q96JN2 1154 aa22.17■■□□□ 1.14
CPT2-204ENST00000635888 ATP10BO94823 1461 aa22.15■■□□□ 1.14
CPT2-204ENST00000635888 ARHGEF11O15085 1522 aa22.14■■□□□ 1.13
CPT2-204ENST00000635888 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
CPT2-204ENST00000635888 ANKRD30BQ9BXX2 1392 aa22.11■■□□□ 1.13
CPT2-204ENST00000635888 SALL2Q9Y467 1007 aaPredicted RBP22.09■■□□□ 1.13
CPT2-204ENST00000635888 TROQ12816 1431 aaPredicted RBP22.08■■□□□ 1.13
CPT2-204ENST00000635888 NUDCQ9Y266 331 aa22.08■■□□□ 1.13
CPT2-204ENST00000635888 KIF14Q15058 1648 aa22.07■■□□□ 1.12
CPT2-204ENST00000635888 PLEKHD1A6NEE1 506 aa22.06■■□□□ 1.12
CPT2-204ENST00000635888 NPM2Q86SE8 214 aaKnown RBP22.06■■□□□ 1.12
CPT2-204ENST00000635888 TCOF1Q13428 1488 aaKnown RBP22.06■■□□□ 1.12
CPT2-204ENST00000635888 GCC2Q8IWJ2 1684 aa22.05■■□□□ 1.12
CPT2-204ENST00000635888 RPRD2Q5VT52 1461 aaKnown RBP22.05■■□□□ 1.12
CPT2-204ENST00000635888 SPATA31E1Q6ZUB1 1445 aa22.05■■□□□ 1.12
CPT2-204ENST00000635888 TEX14Q8IWB6 1497 aa22.04■■□□□ 1.12
CPT2-204ENST00000635888 ANP32AP39687 249 aaKnown RBP22.03■■□□□ 1.12
CPT2-204ENST00000635888 SMG6Q86US8 1419 aaKnown RBP22.02■■□□□ 1.12
CPT2-204ENST00000635888 DHX29Q7Z478 1369 aaKnown RBP22.02■■□□□ 1.12
CPT2-204ENST00000635888 TMC1Q8TDI8 760 aa22.01■■□□□ 1.11
CPT2-204ENST00000635888 ZNF777Q9ULD5 760 aaPredicted RBP22.01■■□□□ 1.11
CPT2-204ENST00000635888 ABCC2Q92887 1545 aa21.99■■□□□ 1.11
CPT2-204ENST00000635888 IPO9Q96P70 1041 aaKnown RBP21.99■■□□□ 1.11
CPT2-204ENST00000635888 USP47Q96K76 1375 aa21.98■■□□□ 1.11
CPT2-204ENST00000635888 ZBTB47Q9UFB7 747 aaPredicted RBP21.98■■□□□ 1.11
CPT2-204ENST00000635888 DAPK1P53355 1430 aa21.97■■□□□ 1.11
CPT2-204ENST00000635888 ABCC5O15440 1437 aa21.96■■□□□ 1.11
CPT2-204ENST00000635888 MYT1LQ9UL68 1186 aa21.96■■□□□ 1.11
CPT2-204ENST00000635888 PNISRQ8TF01 805 aaKnown RBP21.95■■□□□ 1.1
CPT2-204ENST00000635888 KDM2AQ9Y2K7 1162 aa21.95■■□□□ 1.1
CPT2-204ENST00000635888 CFDP1Q9UEE9 299 aaPredicted RBP21.95■■□□□ 1.1
CPT2-204ENST00000635888 GPATCH8Q9UKJ3 1502 aaKnown RBP21.94■■□□□ 1.1
CPT2-204ENST00000635888 MIA2Q96PC5 1412 aa21.94■■□□□ 1.1
CPT2-204ENST00000635888 PKD2Q13563 968 aa21.93■■□□□ 1.1
CPT2-204ENST00000635888 EXOC6Q8TAG9 804 aa21.93■■□□□ 1.1
CPT2-204ENST00000635888 RTL5Q5HYW3 569 aaPredicted RBP21.93■■□□□ 1.1
CPT2-204ENST00000635888 RNF123Q5XPI4 1314 aa21.91■■□□□ 1.1
CPT2-204ENST00000635888 SKAP1Q86WV1 359 aa21.91■■□□□ 1.1
CPT2-204ENST00000635888 LAS1LQ9Y4W2 734 aaKnown RBP21.91■■□□□ 1.1
CPT2-204ENST00000635888 ADCY10Q96PN6 1610 aa21.9■■□□□ 1.1
CPT2-204ENST00000635888 ABCC10Q5T3U5 1492 aa21.9■■□□□ 1.1
CPT2-204ENST00000635888 BCORL1Q5H9F3 1711 aa21.9■■□□□ 1.1
CPT2-204ENST00000635888 ZCCHC11Q5TAX3 1644 aaKnown RBP21.88■■□□□ 1.09
CPT2-204ENST00000635888 CARD11Q9BXL7 1154 aa21.87■■□□□ 1.09
CPT2-204ENST00000635888 PZPP20742 1482 aa21.85■■□□□ 1.09
CPT2-204ENST00000635888 ST20-MTHFSA0A0A6YYL1 179 aa21.85■■□□□ 1.09
CPT2-204ENST00000635888 RTN4Q9NQC3 1192 aaKnown RBP21.85■■□□□ 1.09
CPT2-204ENST00000635888 UHRF1BP1LA0JNW5 1464 aa21.85■■□□□ 1.09
CPT2-204ENST00000635888 CAMSAP2Q08AD1 1489 aa21.85■■□□□ 1.09
CPT2-204ENST00000635888 CDC42BPAQ5VT25 1732 aa21.84■■□□□ 1.09
CPT2-204ENST00000635888 ROCK1Q13464 1354 aa21.84■■□□□ 1.09
CPT2-204ENST00000635888 RRP1P56182 461 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms