RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 CDK11AQ9UQ88 783 aaPredicted RBP14.87□□□□□ -0.03
PSPC1-207ENST00000635251 ROCK1Q13464 1354 aa14.87□□□□□ -0.03
PSPC1-207ENST00000635251 DISP1Q96F81 1524 aa14.85□□□□□ -0.03
PSPC1-207ENST00000635251 ABCC5O15440 1437 aa14.85□□□□□ -0.03
PSPC1-207ENST00000635251 ZNF644Q9H582 1327 aaPredicted RBP14.85□□□□□ -0.03
PSPC1-207ENST00000635251 DNMT1P26358 1616 aaKnown RBP14.85□□□□□ -0.03
PSPC1-207ENST00000635251 NUP153P49790 1475 aaKnown RBP14.84□□□□□ -0.03
PSPC1-207ENST00000635251 CNTLNQ9NXG0 1405 aa14.84□□□□□ -0.03
PSPC1-207ENST00000635251 RAPGEF6Q8TEU7 1601 aa14.84□□□□□ -0.03
PSPC1-207ENST00000635251 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
PSPC1-207ENST00000635251 ANKRD30BQ9BXX2 1392 aa14.83□□□□□ -0.04
PSPC1-207ENST00000635251 RPRD2Q5VT52 1461 aaKnown RBP14.82□□□□□ -0.04
PSPC1-207ENST00000635251 GRIN2AQ12879 1464 aa14.81□□□□□ -0.04
PSPC1-207ENST00000635251 CCDC7Q96M83 1385 aa14.81□□□□□ -0.04
PSPC1-207ENST00000635251 NBPF8Q3BBV2 869 aa14.8□□□□□ -0.04
PSPC1-207ENST00000635251 NCOA1Q15788 1441 aa14.79□□□□□ -0.04
PSPC1-207ENST00000635251 C11orf95C9JLR9 678 aaPredicted RBP14.79□□□□□ -0.04
PSPC1-207ENST00000635251 CFDP1Q9UEE9 299 aaPredicted RBP14.79□□□□□ -0.04
PSPC1-207ENST00000635251 ZNF777Q9ULD5 760 aaPredicted RBP14.78□□□□□ -0.04
PSPC1-207ENST00000635251 PRG4Q92954 1404 aaPredicted RBP14.78□□□□□ -0.04
PSPC1-207ENST00000635251 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
PSPC1-207ENST00000635251 TEX14Q8IWB6 1497 aa14.78□□□□□ -0.04
PSPC1-207ENST00000635251 TROQ12816 1431 aaPredicted RBP14.77□□□□□ -0.04
PSPC1-207ENST00000635251 CAMSAP2Q08AD1 1489 aa14.77□□□□□ -0.05
PSPC1-207ENST00000635251 CHMP7Q8WUX9 453 aaPredicted RBP14.76□□□□□ -0.05
PSPC1-207ENST00000635251 PRKRIP1Q9H875 184 aaPredicted RBP14.76□□□□□ -0.05
PSPC1-207ENST00000635251 IRX6P78412 446 aaPredicted RBP14.76□□□□□ -0.05
PSPC1-207ENST00000635251 CCDC184Q52MB2 194 aa14.76□□□□□ -0.05
PSPC1-207ENST00000635251 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
PSPC1-207ENST00000635251 MRS2Q9HD23 443 aa14.75□□□□□ -0.05
PSPC1-207ENST00000635251 FBLN2P98095 1184 aa14.75□□□□□ -0.05
PSPC1-207ENST00000635251 ITSN2Q9NZM3 1697 aa14.74□□□□□ -0.05
PSPC1-207ENST00000635251 ANP32EQ9BTT0 268 aa14.74□□□□□ -0.05
PSPC1-207ENST00000635251 RBM19Q9Y4C8 960 aaKnown RBP14.74□□□□□ -0.05
PSPC1-207ENST00000635251 KIF7Q2M1P5 1343 aa14.73□□□□□ -0.05
PSPC1-207ENST00000635251 PLB1Q6P1J6 1458 aa14.73□□□□□ -0.05
PSPC1-207ENST00000635251 PZPP20742 1482 aa14.72□□□□□ -0.05
PSPC1-207ENST00000635251 ADGBQ8N7X0 1667 aa14.71□□□□□ -0.05
PSPC1-207ENST00000635251 GPATCH8Q9UKJ3 1502 aaKnown RBP14.71□□□□□ -0.05
PSPC1-207ENST00000635251 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
PSPC1-207ENST00000635251 MAGI1Q96QZ7 1491 aaPredicted RBP14.71□□□□□ -0.05
PSPC1-207ENST00000635251 ZNF326Q5BKZ1 582 aaKnown RBP14.71□□□□□ -0.05
PSPC1-207ENST00000635251 CARMIL2Q6F5E8 1435 aa14.7□□□□□ -0.06
PSPC1-207ENST00000635251 SPATA31E1Q6ZUB1 1445 aa14.7□□□□□ -0.06
PSPC1-207ENST00000635251 CEP170Q5SW79 1584 aa14.7□□□□□ -0.06
PSPC1-207ENST00000635251 ANKRD30AQ9BXX3 1397 aa14.7□□□□□ -0.06
PSPC1-207ENST00000635251 KIF14Q15058 1648 aa14.7□□□□□ -0.06
PSPC1-207ENST00000635251 PKD2Q13563 968 aa14.69□□□□□ -0.06
PSPC1-207ENST00000635251 POLR3GLQ9BT43 218 aa14.69□□□□□ -0.06
PSPC1-207ENST00000635251 SYNJ2O15056 1496 aa14.69□□□□□ -0.06
PSPC1-207ENST00000635251 KIAA1107Q9UPP5 1409 aa14.69□□□□□ -0.06
PSPC1-207ENST00000635251 ADCY10Q96PN6 1610 aa14.68□□□□□ -0.06
PSPC1-207ENST00000635251 ADGRL2O95490 1459 aa14.67□□□□□ -0.06
PSPC1-207ENST00000635251 JPH4Q96JJ6 628 aa14.67□□□□□ -0.06
PSPC1-207ENST00000635251 POLR1AO95602 1720 aaPredicted RBP14.66□□□□□ -0.06
PSPC1-207ENST00000635251 CROCC2H7BZ55 1655 aa14.66□□□□□ -0.06
PSPC1-207ENST00000635251 PLEKHD1A6NEE1 506 aa14.66□□□□□ -0.06
PSPC1-207ENST00000635251 CNGB1Q14028 1251 aaPredicted RBP14.66□□□□□ -0.06
PSPC1-207ENST00000635251 ZBED9Q6R2W3 1325 aa14.66□□□□□ -0.06
PSPC1-207ENST00000635251 ERICH6BQ5W0A0 696 aa14.65□□□□□ -0.06
PSPC1-207ENST00000635251 ANKRD50Q9ULJ7 1429 aa14.65□□□□□ -0.06
PSPC1-207ENST00000635251 USP47Q96K76 1375 aa14.64□□□□□ -0.07
PSPC1-207ENST00000635251 MBD5Q9P267 1494 aa14.64□□□□□ -0.07
PSPC1-207ENST00000635251 PPP4R2Q9NY27 417 aa14.63□□□□□ -0.07
PSPC1-207ENST00000635251 NUP155O75694 1391 aa14.62□□□□□ -0.07
PSPC1-207ENST00000635251 TSPY4P0CV99 314 aa14.61□□□□□ -0.07
PSPC1-207ENST00000635251 TSPY10P0CW01 314 aa14.61□□□□□ -0.07
PSPC1-207ENST00000635251 NUP160Q12769 1436 aa14.61□□□□□ -0.07
PSPC1-207ENST00000635251 C9orf84Q5VXU9 1444 aa14.6□□□□□ -0.07
PSPC1-207ENST00000635251 CDC42BPAQ5VT25 1732 aa14.58□□□□□ -0.08
PSPC1-207ENST00000635251 BCORL1Q5H9F3 1711 aa14.58□□□□□ -0.08
PSPC1-207ENST00000635251 DHX29Q7Z478 1369 aaKnown RBP14.58□□□□□ -0.08
PSPC1-207ENST00000635251 CARD11Q9BXL7 1154 aa14.58□□□□□ -0.08
PSPC1-207ENST00000635251 SHANK2Q9UPX8 1470 aa14.58□□□□□ -0.08
PSPC1-207ENST00000635251 ABCA8O94911 1581 aa14.57□□□□□ -0.08
PSPC1-207ENST00000635251 KDM5CP41229 1560 aa14.57□□□□□ -0.08
PSPC1-207ENST00000635251 ATP10BO94823 1461 aa14.57□□□□□ -0.08
PSPC1-207ENST00000635251 ABCC10Q5T3U5 1492 aa14.57□□□□□ -0.08
PSPC1-207ENST00000635251 ARID4BQ4LE39 1312 aaPredicted RBP14.57□□□□□ -0.08
PSPC1-207ENST00000635251 KDM2AQ9Y2K7 1162 aa14.57□□□□□ -0.08
PSPC1-207ENST00000635251 HNRNPMP52272 730 aaKnown RBP eCLIP14.55□□□□□ -0.08
PSPC1-207ENST00000635251 UHRF1BP1Q6BDS2 1440 aa14.55□□□□□ -0.08
PSPC1-207ENST00000635251 RALGAPBQ86X10 1494 aa14.54□□□□□ -0.08
PSPC1-207ENST00000635251 ROCK2O75116 1388 aaKnown RBP14.54□□□□□ -0.08
PSPC1-207ENST00000635251 KIF15Q9NS87 1388 aa14.54□□□□□ -0.08
PSPC1-207ENST00000635251 B4GALNT3Q6L9W6 998 aa14.54□□□□□ -0.08
PSPC1-207ENST00000635251 DCAF11Q8TEB1 546 aa14.53□□□□□ -0.08
PSPC1-207ENST00000635251 ARHGEF12Q9NZN5 1544 aa14.53□□□□□ -0.08
PSPC1-207ENST00000635251 KDM5DQ9BY66 1539 aa14.52□□□□□ -0.09
PSPC1-207ENST00000635251 TMC1Q8TDI8 760 aa14.52□□□□□ -0.09
PSPC1-207ENST00000635251 FANCIQ9NVI1 1328 aa14.51□□□□□ -0.09
PSPC1-207ENST00000635251 SMG6Q86US8 1419 aaKnown RBP14.51□□□□□ -0.09
PSPC1-207ENST00000635251 ST20-MTHFSA0A0A6YYL1 179 aa14.5□□□□□ -0.09
PSPC1-207ENST00000635251 NUDCQ9Y266 331 aa14.5□□□□□ -0.09
PSPC1-207ENST00000635251 MSH5O43196 834 aa14.49□□□□□ -0.09
PSPC1-207ENST00000635251 PTPRGP23470 1445 aa14.49□□□□□ -0.09
PSPC1-207ENST00000635251 ERICH6Q7L0X2 663 aa14.49□□□□□ -0.09
PSPC1-207ENST00000635251 ARHGEF5Q12774 1597 aa14.49□□□□□ -0.09
PSPC1-207ENST00000635251 SENP3-EIF4A1A0A087X0R7 540 aa14.48□□□□□ -0.09
PSPC1-207ENST00000635251 CCDC141Q6ZP82 1450 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms