RNA–Protein interactions for RNA: ENST00000635082.1

ATRIP-205, Transcript of ATR interacting protein, humanhuman

TSL 5

Gene ATRIP, Length 793 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-205ENST00000635082 CEBPAP49715 358 aaPredicted RBP19.97■□□□□ 0.79
ATRIP-205ENST00000635082 EFCAB5A4FU69 1503 aa19.96■□□□□ 0.79
ATRIP-205ENST00000635082 ARHGEF12Q9NZN5 1544 aa19.95■□□□□ 0.78
ATRIP-205ENST00000635082 PTPRTO14522 1441 aa19.94■□□□□ 0.78
ATRIP-205ENST00000635082 IQSEC2Q5JU85 1478 aa19.93■□□□□ 0.78
ATRIP-205ENST00000635082 SETD1BQ9UPS6 1966 aaKnown RBP19.92■□□□□ 0.78
ATRIP-205ENST00000635082 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
ATRIP-205ENST00000635082 HECW1Q76N89 1606 aa19.91■□□□□ 0.78
ATRIP-205ENST00000635082 CFAP74Q9C0B2 1584 aa19.9■□□□□ 0.78
ATRIP-205ENST00000635082 UHRF1BP1Q6BDS2 1440 aa19.89■□□□□ 0.77
ATRIP-205ENST00000635082 MAGI2Q86UL8 1455 aa19.89■□□□□ 0.77
ATRIP-205ENST00000635082 RAPGEF6Q8TEU7 1601 aa19.89■□□□□ 0.77
ATRIP-205ENST00000635082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
ATRIP-205ENST00000635082 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
ATRIP-205ENST00000635082 FAM9AQ8IZU1 332 aaPredicted RBP19.84■□□□□ 0.77
ATRIP-205ENST00000635082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.82■□□□□ 0.76
ATRIP-205ENST00000635082 ATP10AO60312 1499 aa19.81■□□□□ 0.76
ATRIP-205ENST00000635082 NUP153P49790 1475 aaKnown RBP19.8■□□□□ 0.76
ATRIP-205ENST00000635082 MED1Q15648 1581 aaPredicted RBP19.8■□□□□ 0.76
ATRIP-205ENST00000635082 C3P01024 1663 aa19.79■□□□□ 0.76
ATRIP-205ENST00000635082 UBAP1LF5GYI3 381 aa19.79■□□□□ 0.76
ATRIP-205ENST00000635082 C9orf84Q5VXU9 1444 aa19.78■□□□□ 0.76
ATRIP-205ENST00000635082 SAMD9Q5K651 1589 aa19.77■□□□□ 0.76
ATRIP-205ENST00000635082 NCOA1Q15788 1441 aa19.76■□□□□ 0.75
ATRIP-205ENST00000635082 SCAPERQ9BY12 1400 aa19.75■□□□□ 0.75
ATRIP-205ENST00000635082 PRXQ9BXM0 1461 aa19.73■□□□□ 0.75
ATRIP-205ENST00000635082 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
ATRIP-205ENST00000635082 ZNF335Q9H4Z2 1342 aaPredicted RBP19.71■□□□□ 0.75
ATRIP-205ENST00000635082 CAMSAP1Q5T5Y3 1602 aa19.67■□□□□ 0.74
ATRIP-205ENST00000635082 TRAPPC8Q9Y2L5 1435 aa19.67■□□□□ 0.74
ATRIP-205ENST00000635082 HSPA1LP34931 641 aa19.66■□□□□ 0.74
ATRIP-205ENST00000635082 PLCH2O75038 1416 aa19.64■□□□□ 0.73
ATRIP-205ENST00000635082 NCKAP5LQ9HCH0 1330 aa19.62■□□□□ 0.73
ATRIP-205ENST00000635082 DIP2CQ9Y2E4 1556 aa19.61■□□□□ 0.73
ATRIP-205ENST00000635082 REREQ9P2R6 1566 aa19.59■□□□□ 0.73
ATRIP-205ENST00000635082 MYO5CQ9NQX4 1742 aa19.59■□□□□ 0.73
ATRIP-205ENST00000635082 KDM5CP41229 1560 aa19.58■□□□□ 0.73
ATRIP-205ENST00000635082 ABCA6Q8N139 1617 aa19.57■□□□□ 0.72
ATRIP-205ENST00000635082 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
ATRIP-205ENST00000635082 PIP4K2BP78356 416 aa19.56■□□□□ 0.72
ATRIP-205ENST00000635082 AFAP1Q8N556 730 aa19.56■□□□□ 0.72
ATRIP-205ENST00000635082 ZNF518AQ6AHZ1 1483 aa19.55■□□□□ 0.72
ATRIP-205ENST00000635082 AGLP35573 1532 aa19.54■□□□□ 0.72
ATRIP-205ENST00000635082 SUPT6HQ7KZ85 1726 aaKnown RBP19.54■□□□□ 0.72
ATRIP-205ENST00000635082 CDK13Q14004 1512 aaKnown RBP19.53■□□□□ 0.72
ATRIP-205ENST00000635082 EFCAB2Q5VUJ9 269 aa19.53■□□□□ 0.72
ATRIP-205ENST00000635082 ESF1Q9H501 851 aaKnown RBP19.53■□□□□ 0.72
ATRIP-205ENST00000635082 RANGAP1P46060 587 aaPredicted RBP19.51■□□□□ 0.71
ATRIP-205ENST00000635082 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
ATRIP-205ENST00000635082 NPATQ14207 1427 aa19.49■□□□□ 0.71
ATRIP-205ENST00000635082 MROH2AA6NES4 1674 aa19.49■□□□□ 0.71
ATRIP-205ENST00000635082 ZNF142P52746 1687 aaPredicted RBP19.49■□□□□ 0.71
ATRIP-205ENST00000635082 PLA2R1Q13018 1463 aa19.48■□□□□ 0.71
ATRIP-205ENST00000635082 TCOF1Q13428 1488 aaKnown RBP19.48■□□□□ 0.71
ATRIP-205ENST00000635082 CNTLNQ9NXG0 1405 aa19.48■□□□□ 0.71
ATRIP-205ENST00000635082 MYO3AQ8NEV4 1616 aa19.47■□□□□ 0.71
ATRIP-205ENST00000635082 PKD2Q13563 968 aa19.47■□□□□ 0.71
ATRIP-205ENST00000635082 TOM1O60784 492 aa19.46■□□□□ 0.71
ATRIP-205ENST00000635082 MLH3Q9UHC1 1453 aa19.46■□□□□ 0.71
ATRIP-205ENST00000635082 KIF14Q15058 1648 aa19.44■□□□□ 0.7
ATRIP-205ENST00000635082 ARHGAP5Q13017 1502 aa19.43■□□□□ 0.7
ATRIP-205ENST00000635082 ALKQ9UM73 1620 aa19.43■□□□□ 0.7
ATRIP-205ENST00000635082 ZMYM3Q14202 1370 aa19.43■□□□□ 0.7
ATRIP-205ENST00000635082 CEP170BQ9Y4F5 1589 aaPredicted RBP19.42■□□□□ 0.7
ATRIP-205ENST00000635082 KIDINS220Q9ULH0 1771 aa19.41■□□□□ 0.7
ATRIP-205ENST00000635082 RGS17Q9UGC6 210 aaPredicted RBP19.4■□□□□ 0.7
ATRIP-205ENST00000635082 CPS1P31327 1500 aa19.4■□□□□ 0.7
ATRIP-205ENST00000635082 CDC42BPBQ9Y5S2 1711 aa19.39■□□□□ 0.7
ATRIP-205ENST00000635082 CLTCQ00610 1675 aaKnown RBP19.39■□□□□ 0.69
ATRIP-205ENST00000635082 ITSN2Q9NZM3 1697 aa19.36■□□□□ 0.69
ATRIP-205ENST00000635082 SHANK2Q9UPX8 1470 aa19.35■□□□□ 0.69
ATRIP-205ENST00000635082 POLR1AO95602 1720 aaPredicted RBP19.34■□□□□ 0.69
ATRIP-205ENST00000635082 PTPRKQ15262 1439 aa19.34■□□□□ 0.69
ATRIP-205ENST00000635082 ABCC1P33527 1531 aa19.33■□□□□ 0.68
ATRIP-205ENST00000635082 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
ATRIP-205ENST00000635082 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
ATRIP-205ENST00000635082 DNMT1P26358 1616 aaKnown RBP19.31■□□□□ 0.68
ATRIP-205ENST00000635082 VWDEQ8N2E2 1590 aa19.28■□□□□ 0.68
ATRIP-205ENST00000635082 TROQ12816 1431 aaPredicted RBP19.27■□□□□ 0.68
ATRIP-205ENST00000635082 PREX2Q70Z35 1606 aa19.27■□□□□ 0.68
ATRIP-205ENST00000635082 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
ATRIP-205ENST00000635082 A2ML1A8K2U0 1454 aa19.26■□□□□ 0.67
ATRIP-205ENST00000635082 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
ATRIP-205ENST00000635082 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
ATRIP-205ENST00000635082 POTEAQ6S8J7 498 aa19.23■□□□□ 0.67
ATRIP-205ENST00000635082 SAMD9LQ8IVG5 1584 aa19.23■□□□□ 0.67
ATRIP-205ENST00000635082 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
ATRIP-205ENST00000635082 STRCP1A6NGW2 1772 aa19.22■□□□□ 0.67
ATRIP-205ENST00000635082 PLXNC1O60486 1568 aa19.2■□□□□ 0.66
ATRIP-205ENST00000635082 CLIP1P30622 1438 aa19.2■□□□□ 0.66
ATRIP-205ENST00000635082 CDC42BPAQ5VT25 1732 aa19.18■□□□□ 0.66
ATRIP-205ENST00000635082 RNF17Q9BXT8 1623 aaKnown RBP19.18■□□□□ 0.66
ATRIP-205ENST00000635082 GGT6Q6P531 493 aa19.16■□□□□ 0.66
ATRIP-205ENST00000635082 LRRC7Q96NW7 1537 aa19.15■□□□□ 0.66
ATRIP-205ENST00000635082 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
ATRIP-205ENST00000635082 A2MP01023 1474 aa19.13■□□□□ 0.65
ATRIP-205ENST00000635082 ATP7AQ04656 1500 aa19.12■□□□□ 0.65
ATRIP-205ENST00000635082 SPAG9O60271 1321 aaKnown RBP19.12■□□□□ 0.65
ATRIP-205ENST00000635082 DEPDC5O75140 1603 aa19.11■□□□□ 0.65
ATRIP-205ENST00000635082 SYCP2Q9BX26 1530 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms