RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 HNRNPUL2Q1KMD3 747 aaKnown RBP15.47■□□□□ 0.07
SOX2-OT-249ENST00000628810 KIF13AQ9H1H9 1805 aa15.46■□□□□ 0.07
SOX2-OT-249ENST00000628810 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
SOX2-OT-249ENST00000628810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.45■□□□□ 0.06
SOX2-OT-249ENST00000628810 MAP3K4Q9Y6R4 1608 aa15.45■□□□□ 0.06
SOX2-OT-249ENST00000628810 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
SOX2-OT-249ENST00000628810 TTC37Q6PGP7 1564 aa15.44■□□□□ 0.06
SOX2-OT-249ENST00000628810 APLP2Q06481 763 aa15.43■□□□□ 0.06
SOX2-OT-249ENST00000628810 KANK4Q5T7N3 995 aaPredicted RBP15.41■□□□□ 0.06
SOX2-OT-249ENST00000628810 NCOA2Q15596 1464 aa15.4■□□□□ 0.06
SOX2-OT-249ENST00000628810 ARAP3Q8WWN8 1544 aa15.4■□□□□ 0.06
SOX2-OT-249ENST00000628810 PREX2Q70Z35 1606 aa15.39■□□□□ 0.05
SOX2-OT-249ENST00000628810 MYO5CQ9NQX4 1742 aa15.38■□□□□ 0.05
SOX2-OT-249ENST00000628810 CAPN15O75808 1086 aa15.38■□□□□ 0.05
SOX2-OT-249ENST00000628810 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
SOX2-OT-249ENST00000628810 PPRC1Q5VV67 1664 aaKnown RBP15.37■□□□□ 0.05
SOX2-OT-249ENST00000628810 ITSN2Q9NZM3 1697 aa15.37■□□□□ 0.05
SOX2-OT-249ENST00000628810 CDC42BPAQ5VT25 1732 aa15.37■□□□□ 0.05
SOX2-OT-249ENST00000628810 KCNH8Q96L42 1107 aa15.36■□□□□ 0.05
SOX2-OT-249ENST00000628810 FAM69CQ0P6D2 419 aa15.35■□□□□ 0.05
SOX2-OT-249ENST00000628810 CD109Q6YHK3 1445 aa15.34■□□□□ 0.05
SOX2-OT-249ENST00000628810 GPATCH8Q9UKJ3 1502 aaKnown RBP15.34■□□□□ 0.05
SOX2-OT-249ENST00000628810 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
SOX2-OT-249ENST00000628810 PLCH2O75038 1416 aa15.34■□□□□ 0.05
SOX2-OT-249ENST00000628810 CFAP74Q9C0B2 1584 aa15.33■□□□□ 0.05
SOX2-OT-249ENST00000628810 CDC42BPBQ9Y5S2 1711 aa15.33■□□□□ 0.04
SOX2-OT-249ENST00000628810 CCNB3Q8WWL7 1395 aa15.31■□□□□ 0.04
SOX2-OT-249ENST00000628810 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
SOX2-OT-249ENST00000628810 TEX14Q8IWB6 1497 aa15.31■□□□□ 0.04
SOX2-OT-249ENST00000628810 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
SOX2-OT-249ENST00000628810 PHLDB1Q86UU1 1377 aa15.3■□□□□ 0.04
SOX2-OT-249ENST00000628810 NEO1Q92859 1461 aa15.29■□□□□ 0.04
SOX2-OT-249ENST00000628810 ARHGAP5Q13017 1502 aa15.28■□□□□ 0.04
SOX2-OT-249ENST00000628810 FANCAO15360 1455 aa15.28■□□□□ 0.04
SOX2-OT-249ENST00000628810 MIA2Q96PC5 1412 aa15.28■□□□□ 0.04
SOX2-OT-249ENST00000628810 SAMD9LQ8IVG5 1584 aa15.27■□□□□ 0.03
SOX2-OT-249ENST00000628810 TRHP20396 242 aaPredicted RBP15.26■□□□□ 0.03
SOX2-OT-249ENST00000628810 TSPOAP1O95153 1857 aa15.26■□□□□ 0.03
SOX2-OT-249ENST00000628810 FGD6Q6ZV73 1430 aa15.26■□□□□ 0.03
SOX2-OT-249ENST00000628810 ABCC1P33527 1531 aa15.25■□□□□ 0.03
SOX2-OT-249ENST00000628810 TCOF1Q13428 1488 aaKnown RBP15.24■□□□□ 0.03
SOX2-OT-249ENST00000628810 PLEKHH2Q8IVE3 1493 aa15.23■□□□□ 0.03
SOX2-OT-249ENST00000628810 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
SOX2-OT-249ENST00000628810 DSG3P32926 999 aa15.23■□□□□ 0.03
SOX2-OT-249ENST00000628810 PTPN23Q9H3S7 1636 aa15.23■□□□□ 0.03
SOX2-OT-249ENST00000628810 CAMSAP2Q08AD1 1489 aa15.22■□□□□ 0.03
SOX2-OT-249ENST00000628810 AKNAQ7Z591 1439 aa15.22■□□□□ 0.03
SOX2-OT-249ENST00000628810 RRBP1Q9P2E9 1410 aaKnown RBP15.22■□□□□ 0.03
SOX2-OT-249ENST00000628810 KIAA1107Q9UPP5 1409 aa15.21■□□□□ 0.03
SOX2-OT-249ENST00000628810 EFCAB2Q5VUJ9 269 aa15.21■□□□□ 0.03
SOX2-OT-249ENST00000628810 ZNF219Q9P2Y4 722 aaPredicted RBP15.21■□□□□ 0.03
SOX2-OT-249ENST00000628810 CFDP1Q9UEE9 299 aaPredicted RBP15.21■□□□□ 0.03
SOX2-OT-249ENST00000628810 ADGRL1O94910 1474 aa15.2■□□□□ 0.02
SOX2-OT-249ENST00000628810 PPARGC1BQ86YN6 1023 aaKnown RBP15.2■□□□□ 0.02
SOX2-OT-249ENST00000628810 SYCP2Q9BX26 1530 aa15.19■□□□□ 0.02
SOX2-OT-249ENST00000628810 ARHGEF5Q12774 1597 aa15.19■□□□□ 0.02
SOX2-OT-249ENST00000628810 ARHGEF12Q9NZN5 1544 aa15.18■□□□□ 0.02
SOX2-OT-249ENST00000628810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.18■□□□□ 0.02
SOX2-OT-249ENST00000628810 MBD5Q9P267 1494 aa15.18■□□□□ 0.02
SOX2-OT-249ENST00000628810 FRMPD1Q5SYB0 1578 aa15.18■□□□□ 0.02
SOX2-OT-249ENST00000628810 RICTORQ6R327 1708 aa15.17■□□□□ 0.02
SOX2-OT-249ENST00000628810 POGZQ7Z3K3 1410 aa15.17■□□□□ 0.02
SOX2-OT-249ENST00000628810 KDM5CP41229 1560 aa15.16■□□□□ 0.02
SOX2-OT-249ENST00000628810 KDM6BO15054 1643 aa15.15■□□□□ 0.02
SOX2-OT-249ENST00000628810 DNMT1P26358 1616 aaKnown RBP15.15■□□□□ 0.02
SOX2-OT-249ENST00000628810 ZMYM4Q5VZL5 1548 aa15.15■□□□□ 0.02
SOX2-OT-249ENST00000628810 SCAPERQ9BY12 1400 aa15.15■□□□□ 0.02
SOX2-OT-249ENST00000628810 DENND4BO75064 1496 aaPredicted RBP15.14■□□□□ 0.01
SOX2-OT-249ENST00000628810 ZNF518AQ6AHZ1 1483 aa15.14■□□□□ 0.01
SOX2-OT-249ENST00000628810 COL17A1Q9UMD9 1497 aaPredicted RBP15.14■□□□□ 0.01
SOX2-OT-249ENST00000628810 CROCC2H7BZ55 1655 aa15.14■□□□□ 0.01
SOX2-OT-249ENST00000628810 ZNF644Q9H582 1327 aaPredicted RBP15.14■□□□□ 0.01
SOX2-OT-249ENST00000628810 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
SOX2-OT-249ENST00000628810 CCDC141Q6ZP82 1450 aa15.13■□□□□ 0.01
SOX2-OT-249ENST00000628810 SHANK2Q9UPX8 1470 aa15.12■□□□□ 0.01
SOX2-OT-249ENST00000628810 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
SOX2-OT-249ENST00000628810 TRAPPC8Q9Y2L5 1435 aa15.11■□□□□ 0.01
SOX2-OT-249ENST00000628810 ZNF777Q9ULD5 760 aaPredicted RBP15.11■□□□□ 0.01
SOX2-OT-249ENST00000628810 INO80Q9ULG1 1556 aaPredicted RBP15.11■□□□□ 0.01
SOX2-OT-249ENST00000628810 HECW2Q9P2P5 1572 aa15.1■□□□□ 0.01
SOX2-OT-249ENST00000628810 DAPK1P53355 1430 aa15.09■□□□□ 0.01
SOX2-OT-249ENST00000628810 ZFYVE16Q7Z3T8 1539 aa15.09■□□□□ 0.01
SOX2-OT-249ENST00000628810 ABCC5O15440 1437 aa15.09■□□□□ 0.01
SOX2-OT-249ENST00000628810 RSPH4AQ5TD94 716 aa15.08■□□□□ 0
SOX2-OT-249ENST00000628810 MAGI2Q86UL8 1455 aa15.08■□□□□ 0
SOX2-OT-249ENST00000628810 MLH3Q9UHC1 1453 aa15.08■□□□□ 0
SOX2-OT-249ENST00000628810 HNRNPMP52272 730 aaKnown RBP eCLIP15.06■□□□□ 0
SOX2-OT-249ENST00000628810 RTEL1-TNFRSF6BF6WH68 1400 aa15.06■□□□□ 0
SOX2-OT-249ENST00000628810 ATP7AQ04656 1500 aa15.06■□□□□ 0
SOX2-OT-249ENST00000628810 PLXNC1O60486 1568 aa15.06■□□□□ 0
SOX2-OT-249ENST00000628810 ADGRL2O95490 1459 aa15.05■□□□□ -0
SOX2-OT-249ENST00000628810 ARHGEF40Q8TER5 1519 aa15.05■□□□□ -0
SOX2-OT-249ENST00000628810 ADGBQ8N7X0 1667 aa15.05■□□□□ -0
SOX2-OT-249ENST00000628810 KIDINS220Q9ULH0 1771 aa15.05■□□□□ -0
SOX2-OT-249ENST00000628810 C9orf84Q5VXU9 1444 aa15.04■□□□□ -0
SOX2-OT-249ENST00000628810 RAPGEF3O95398 923 aa15.04■□□□□ -0
SOX2-OT-249ENST00000628810 FAM50AQ14320 339 aaKnown RBP15.04■□□□□ -0
SOX2-OT-249ENST00000628810 PTPRKQ15262 1439 aa15.03■□□□□ -0
SOX2-OT-249ENST00000628810 AFAP1Q8N556 730 aa15.03■□□□□ -0
SOX2-OT-249ENST00000628810 ABCA6Q8N139 1617 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms