RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-229ENST00000628515 NAIPQ13075 1403 aa22.05■■□□□ 1.12
NRXN1-229ENST00000628515 SAMD9Q5K651 1589 aa22.04■■□□□ 1.12
NRXN1-229ENST00000628515 KIAA0586Q9BVV6 1533 aa22.03■■□□□ 1.12
NRXN1-229ENST00000628515 L3MBTL2Q969R5 705 aa22.03■■□□□ 1.12
NRXN1-229ENST00000628515 NCOA2Q15596 1464 aa22.03■■□□□ 1.12
NRXN1-229ENST00000628515 PLB1Q6P1J6 1458 aa22.03■■□□□ 1.12
NRXN1-229ENST00000628515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
NRXN1-229ENST00000628515 PRKRIP1Q9H875 184 aaPredicted RBP22.02■■□□□ 1.12
NRXN1-229ENST00000628515 PTPN23Q9H3S7 1636 aa22.02■■□□□ 1.12
NRXN1-229ENST00000628515 SYNJ2O15056 1496 aa22.02■■□□□ 1.12
NRXN1-229ENST00000628515 DEKP35659 375 aaKnown RBP22.02■■□□□ 1.12
NRXN1-229ENST00000628515 MAGI3Q5TCQ9 1506 aa22.01■■□□□ 1.11
NRXN1-229ENST00000628515 DISP1Q96F81 1524 aa21.99■■□□□ 1.11
NRXN1-229ENST00000628515 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
NRXN1-229ENST00000628515 LRRIQ1Q96JM4 1722 aa21.99■■□□□ 1.11
NRXN1-229ENST00000628515 EPRSP07814 1512 aaKnown RBP21.98■■□□□ 1.11
NRXN1-229ENST00000628515 ZNF326Q5BKZ1 582 aaKnown RBP21.97■■□□□ 1.11
NRXN1-229ENST00000628515 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
NRXN1-229ENST00000628515 CNTLNQ9NXG0 1405 aa21.96■■□□□ 1.11
NRXN1-229ENST00000628515 MYOM3Q5VTT5 1437 aa21.96■■□□□ 1.11
NRXN1-229ENST00000628515 MPHOSPH9Q99550 1183 aa21.95■■□□□ 1.1
NRXN1-229ENST00000628515 PRG4Q92954 1404 aaPredicted RBP21.95■■□□□ 1.1
NRXN1-229ENST00000628515 ERICH6BQ5W0A0 696 aa21.95■■□□□ 1.1
NRXN1-229ENST00000628515 NOP58Q9Y2X3 529 aaKnown RBP21.94■■□□□ 1.1
NRXN1-229ENST00000628515 PAK3O75914 559 aaPredicted RBP21.93■■□□□ 1.1
NRXN1-229ENST00000628515 ZBED9Q6R2W3 1325 aa21.91■■□□□ 1.1
NRXN1-229ENST00000628515 CCDC7Q96M83 1385 aa21.91■■□□□ 1.1
NRXN1-229ENST00000628515 CCDC136Q96JN2 1154 aa21.91■■□□□ 1.1
NRXN1-229ENST00000628515 KDM5BQ9UGL1 1544 aa21.9■■□□□ 1.1
NRXN1-229ENST00000628515 NBPF8Q3BBV2 869 aa21.89■■□□□ 1.09
NRXN1-229ENST00000628515 CFDP1Q9UEE9 299 aaPredicted RBP21.89■■□□□ 1.09
NRXN1-229ENST00000628515 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
NRXN1-229ENST00000628515 CARMIL2Q6F5E8 1435 aa21.88■■□□□ 1.09
NRXN1-229ENST00000628515 UGGT2Q9NYU1 1516 aa21.87■■□□□ 1.09
NRXN1-229ENST00000628515 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
NRXN1-229ENST00000628515 AKNAQ7Z591 1439 aa21.87■■□□□ 1.09
NRXN1-229ENST00000628515 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
NRXN1-229ENST00000628515 KIF7Q2M1P5 1343 aa21.85■■□□□ 1.09
NRXN1-229ENST00000628515 ANO8Q9HCE9 1232 aaPredicted RBP21.84■■□□□ 1.09
NRXN1-229ENST00000628515 HECW1Q76N89 1606 aa21.83■■□□□ 1.09
NRXN1-229ENST00000628515 ANP32AP39687 249 aaKnown RBP21.83■■□□□ 1.08
NRXN1-229ENST00000628515 NPM2Q86SE8 214 aaKnown RBP21.82■■□□□ 1.08
NRXN1-229ENST00000628515 SLC4A1APQ9BWU0 796 aaKnown RBP21.82■■□□□ 1.08
NRXN1-229ENST00000628515 PTPRGP23470 1445 aa21.81■■□□□ 1.08
NRXN1-229ENST00000628515 MYT1LQ9UL68 1186 aa21.8■■□□□ 1.08
NRXN1-229ENST00000628515 NUP160Q12769 1436 aa21.8■■□□□ 1.08
NRXN1-229ENST00000628515 EHBP1L1Q8N3D4 1523 aa21.79■■□□□ 1.08
NRXN1-229ENST00000628515 NCOA1Q15788 1441 aa21.79■■□□□ 1.08
NRXN1-229ENST00000628515 RTL5Q5HYW3 569 aaPredicted RBP21.79■■□□□ 1.08
NRXN1-229ENST00000628515 SALL2Q9Y467 1007 aaPredicted RBP21.79■■□□□ 1.08
NRXN1-229ENST00000628515 SUPT6HQ7KZ85 1726 aaKnown RBP21.79■■□□□ 1.08
NRXN1-229ENST00000628515 KDM6BO15054 1643 aa21.77■■□□□ 1.08
NRXN1-229ENST00000628515 DENND4BO75064 1496 aaPredicted RBP21.77■■□□□ 1.08
NRXN1-229ENST00000628515 ZBTB47Q9UFB7 747 aaPredicted RBP21.76■■□□□ 1.07
NRXN1-229ENST00000628515 HNRNPMP52272 730 aaKnown RBP eCLIP21.75■■□□□ 1.07
NRXN1-229ENST00000628515 NUDCQ9Y266 331 aa21.74■■□□□ 1.07
NRXN1-229ENST00000628515 RAPGEF6Q8TEU7 1601 aa21.74■■□□□ 1.07
NRXN1-229ENST00000628515 ERCC6L2Q5T890 1561 aa21.72■■□□□ 1.07
NRXN1-229ENST00000628515 TMC1Q8TDI8 760 aa21.72■■□□□ 1.07
NRXN1-229ENST00000628515 IPO9Q96P70 1041 aaKnown RBP21.7■■□□□ 1.06
NRXN1-229ENST00000628515 CHD1O14646 1710 aa21.69■■□□□ 1.06
NRXN1-229ENST00000628515 ATP10BO94823 1461 aa21.65■■□□□ 1.06
NRXN1-229ENST00000628515 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.06
NRXN1-229ENST00000628515 ANKRD30BQ9BXX2 1392 aa21.64■■□□□ 1.06
NRXN1-229ENST00000628515 ARHGEF11O15085 1522 aa21.64■■□□□ 1.06
NRXN1-229ENST00000628515 KIF14Q15058 1648 aa21.64■■□□□ 1.05
NRXN1-229ENST00000628515 SMG6Q86US8 1419 aaKnown RBP21.64■■□□□ 1.05
NRXN1-229ENST00000628515 LAS1LQ9Y4W2 734 aaKnown RBP21.64■■□□□ 1.05
NRXN1-229ENST00000628515 RTN4Q9NQC3 1192 aaKnown RBP21.61■■□□□ 1.05
NRXN1-229ENST00000628515 KDM2AQ9Y2K7 1162 aa21.61■■□□□ 1.05
NRXN1-229ENST00000628515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.6■■□□□ 1.05
NRXN1-229ENST00000628515 RPRD2Q5VT52 1461 aaKnown RBP21.59■■□□□ 1.05
NRXN1-229ENST00000628515 USP47Q96K76 1375 aa21.59■■□□□ 1.05
NRXN1-229ENST00000628515 ABCC5O15440 1437 aa21.58■■□□□ 1.04
NRXN1-229ENST00000628515 GCC2Q8IWJ2 1684 aa21.57■■□□□ 1.04
NRXN1-229ENST00000628515 EXOC6Q8TAG9 804 aa21.57■■□□□ 1.04
NRXN1-229ENST00000628515 DAPK1P53355 1430 aa21.56■■□□□ 1.04
NRXN1-229ENST00000628515 TSPY4P0CV99 314 aa21.56■■□□□ 1.04
NRXN1-229ENST00000628515 TSPY10P0CW01 314 aa21.56■■□□□ 1.04
NRXN1-229ENST00000628515 GPATCH8Q9UKJ3 1502 aaKnown RBP21.55■■□□□ 1.04
NRXN1-229ENST00000628515 TCOF1Q13428 1488 aaKnown RBP21.55■■□□□ 1.04
NRXN1-229ENST00000628515 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
NRXN1-229ENST00000628515 SPATA31E1Q6ZUB1 1445 aa21.55■■□□□ 1.04
NRXN1-229ENST00000628515 DHX29Q7Z478 1369 aaKnown RBP21.55■■□□□ 1.04
NRXN1-229ENST00000628515 PNISRQ8TF01 805 aaKnown RBP21.55■■□□□ 1.04
NRXN1-229ENST00000628515 PKD2Q13563 968 aa21.54■■□□□ 1.04
NRXN1-229ENST00000628515 CARD11Q9BXL7 1154 aa21.53■■□□□ 1.04
NRXN1-229ENST00000628515 MIA2Q96PC5 1412 aa21.52■■□□□ 1.04
NRXN1-229ENST00000628515 CAMSAP2Q08AD1 1489 aa21.52■■□□□ 1.03
NRXN1-229ENST00000628515 NEFMP07197 916 aa21.5■■□□□ 1.03
NRXN1-229ENST00000628515 IL27Q8NEV9 243 aa21.5■■□□□ 1.03
NRXN1-229ENST00000628515 SKAP1Q86WV1 359 aa21.49■■□□□ 1.03
NRXN1-229ENST00000628515 RRP1P56182 461 aaKnown RBP21.48■■□□□ 1.03
NRXN1-229ENST00000628515 RNF123Q5XPI4 1314 aa21.48■■□□□ 1.03
NRXN1-229ENST00000628515 RCAN3Q9UKA8 241 aa21.46■■□□□ 1.03
NRXN1-229ENST00000628515 ABCA8O94911 1581 aa21.46■■□□□ 1.03
NRXN1-229ENST00000628515 ST20-MTHFSA0A0A6YYL1 179 aa21.46■■□□□ 1.03
NRXN1-229ENST00000628515 PLIN1O60240 522 aa21.45■■□□□ 1.02
NRXN1-229ENST00000628515 PDE4AP27815 886 aa21.45■■□□□ 1.02
NRXN1-229ENST00000628515 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms