RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
SRGAP2-217ENST00000624873 PPM1GO15355 546 aaPredicted RBP13.64□□□□□ -0.23
SRGAP2-217ENST00000624873 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
SRGAP2-217ENST00000624873 HNRNPUQ00839 825 aaKnown RBP eCLIP13.64□□□□□ -0.23
SRGAP2-217ENST00000624873 BCL11AQ9H165 835 aa13.64□□□□□ -0.23
SRGAP2-217ENST00000624873 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
SRGAP2-217ENST00000624873 FOXD1Q16676 465 aa13.62□□□□□ -0.23
SRGAP2-217ENST00000624873 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
SRGAP2-217ENST00000624873 KIAA0586Q9BVV6 1533 aa13.62□□□□□ -0.23
SRGAP2-217ENST00000624873 RAB3GAP2Q9H2M9 1393 aa13.61□□□□□ -0.23
SRGAP2-217ENST00000624873 MYOM3Q5VTT5 1437 aa13.61□□□□□ -0.23
SRGAP2-217ENST00000624873 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
SRGAP2-217ENST00000624873 NUDCQ9Y266 331 aa13.6□□□□□ -0.23
SRGAP2-217ENST00000624873 CASKIN1Q8WXD9 1431 aa13.59□□□□□ -0.23
SRGAP2-217ENST00000624873 PRXQ9BXM0 1461 aa13.58□□□□□ -0.24
SRGAP2-217ENST00000624873 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
SRGAP2-217ENST00000624873 KIF21BO75037 1637 aa13.57□□□□□ -0.24
SRGAP2-217ENST00000624873 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.56□□□□□ -0.24
SRGAP2-217ENST00000624873 EFCAB5A4FU69 1503 aa13.56□□□□□ -0.24
SRGAP2-217ENST00000624873 MYT1Q01538 1121 aa13.56□□□□□ -0.24
SRGAP2-217ENST00000624873 HDGFL2Q7Z4V5 671 aaPredicted RBP13.56□□□□□ -0.24
SRGAP2-217ENST00000624873 VGFO15240 615 aaPredicted RBP13.55□□□□□ -0.24
SRGAP2-217ENST00000624873 UACAQ9BZF9 1416 aa13.53□□□□□ -0.24
SRGAP2-217ENST00000624873 AFAP1Q8N556 730 aa13.52□□□□□ -0.24
SRGAP2-217ENST00000624873 MAPK8IP3Q9UPT6 1336 aa13.52□□□□□ -0.24
SRGAP2-217ENST00000624873 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.24
SRGAP2-217ENST00000624873 GRIN2AQ12879 1464 aa13.52□□□□□ -0.24
SRGAP2-217ENST00000624873 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.25
SRGAP2-217ENST00000624873 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
SRGAP2-217ENST00000624873 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
SRGAP2-217ENST00000624873 ROCK2O75116 1388 aaKnown RBP13.51□□□□□ -0.25
SRGAP2-217ENST00000624873 ZNF644Q9H582 1327 aaPredicted RBP13.51□□□□□ -0.25
SRGAP2-217ENST00000624873 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
SRGAP2-217ENST00000624873 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
SRGAP2-217ENST00000624873 FYCO1Q9BQS8 1478 aa13.51□□□□□ -0.25
SRGAP2-217ENST00000624873 KIF15Q9NS87 1388 aa13.5□□□□□ -0.25
SRGAP2-217ENST00000624873 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
SRGAP2-217ENST00000624873 ZNF608Q9ULD9 1512 aaPredicted RBP13.5□□□□□ -0.25
SRGAP2-217ENST00000624873 FGD6Q6ZV73 1430 aa13.49□□□□□ -0.25
SRGAP2-217ENST00000624873 SOX12O15370 315 aa13.49□□□□□ -0.25
SRGAP2-217ENST00000624873 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.48□□□□□ -0.25
SRGAP2-217ENST00000624873 TROQ12816 1431 aaPredicted RBP13.48□□□□□ -0.25
SRGAP2-217ENST00000624873 IQGAP2Q13576 1575 aa13.48□□□□□ -0.25
SRGAP2-217ENST00000624873 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
SRGAP2-217ENST00000624873 MORC1Q86VD1 984 aa13.47□□□□□ -0.25
SRGAP2-217ENST00000624873 LRRC9Q6ZRR7 1453 aa13.47□□□□□ -0.25
SRGAP2-217ENST00000624873 CUL7Q14999 1698 aa13.47□□□□□ -0.25
SRGAP2-217ENST00000624873 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
SRGAP2-217ENST00000624873 U2SURPO15042 1029 aaKnown RBP13.46□□□□□ -0.25
SRGAP2-217ENST00000624873 NGDNQ8NEJ9 315 aaKnown RBP13.46□□□□□ -0.25
SRGAP2-217ENST00000624873 L3MBTL2Q969R5 705 aa13.46□□□□□ -0.25
SRGAP2-217ENST00000624873 CC2D1BQ5T0F9 858 aaKnown RBP13.46□□□□□ -0.25
SRGAP2-217ENST00000624873 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
SRGAP2-217ENST00000624873 ARXQ96QS3 562 aa13.45□□□□□ -0.26
SRGAP2-217ENST00000624873 ARAP1Q96P48 1450 aa13.45□□□□□ -0.26
SRGAP2-217ENST00000624873 HSPA5P11021 654 aaKnown RBP13.44□□□□□ -0.26
SRGAP2-217ENST00000624873 ANKRD50Q9ULJ7 1429 aa13.42□□□□□ -0.26
SRGAP2-217ENST00000624873 TRAK1Q9UPV9 953 aa13.42□□□□□ -0.26
SRGAP2-217ENST00000624873 POGZQ7Z3K3 1410 aa13.42□□□□□ -0.26
SRGAP2-217ENST00000624873 CSB-PGBD3P0DP91 1061 aa13.42□□□□□ -0.26
SRGAP2-217ENST00000624873 HECW1Q76N89 1606 aa13.42□□□□□ -0.26
SRGAP2-217ENST00000624873 STAC3Q96MF2 364 aa13.41□□□□□ -0.26
SRGAP2-217ENST00000624873 RAPGEF3O95398 923 aa13.41□□□□□ -0.26
SRGAP2-217ENST00000624873 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
SRGAP2-217ENST00000624873 MYH16Q9H6N6 1097 aa13.41□□□□□ -0.26
SRGAP2-217ENST00000624873 SCAPERQ9BY12 1400 aa13.4□□□□□ -0.26
SRGAP2-217ENST00000624873 PHLDB1Q86UU1 1377 aa13.4□□□□□ -0.26
SRGAP2-217ENST00000624873 CD109Q6YHK3 1445 aa13.39□□□□□ -0.27
SRGAP2-217ENST00000624873 MIER1Q8N108 512 aa13.39□□□□□ -0.27
SRGAP2-217ENST00000624873 LAS1LQ9Y4W2 734 aaKnown RBP13.38□□□□□ -0.27
SRGAP2-217ENST00000624873 EHBP1L1Q8N3D4 1523 aa13.38□□□□□ -0.27
SRGAP2-217ENST00000624873 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
SRGAP2-217ENST00000624873 MIA2Q96PC5 1412 aa13.37□□□□□ -0.27
SRGAP2-217ENST00000624873 CCDC9Q9Y3X0 531 aaKnown RBP13.37□□□□□ -0.27
SRGAP2-217ENST00000624873 GTF3C3Q9Y5Q9 886 aa13.37□□□□□ -0.27
SRGAP2-217ENST00000624873 THEMISQ8N1K5 641 aaPredicted RBP13.35□□□□□ -0.27
SRGAP2-217ENST00000624873 NPHP1O15259 732 aa13.35□□□□□ -0.27
SRGAP2-217ENST00000624873 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
SRGAP2-217ENST00000624873 RTF1Q92541 710 aaKnown RBP13.34□□□□□ -0.27
SRGAP2-217ENST00000624873 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
SRGAP2-217ENST00000624873 BIVM-ERCC5R4GMW8 1640 aa13.34□□□□□ -0.27
SRGAP2-217ENST00000624873 EVC2Q86UK5 1308 aa13.33□□□□□ -0.27
SRGAP2-217ENST00000624873 PLB1Q6P1J6 1458 aa13.33□□□□□ -0.28
SRGAP2-217ENST00000624873 C9orf84Q5VXU9 1444 aa13.32□□□□□ -0.28
SRGAP2-217ENST00000624873 TXNDC2Q86VQ3 553 aa13.32□□□□□ -0.28
SRGAP2-217ENST00000624873 FKBP8Q14318 412 aa13.31□□□□□ -0.28
SRGAP2-217ENST00000624873 ATF3P18847 181 aa13.31□□□□□ -0.28
SRGAP2-217ENST00000624873 SLC52A1Q9NWF4 448 aa13.31□□□□□ -0.28
SRGAP2-217ENST00000624873 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
SRGAP2-217ENST00000624873 UPF2Q9HAU5 1272 aaKnown RBP13.3□□□□□ -0.28
SRGAP2-217ENST00000624873 AMPHP49418 695 aa13.3□□□□□ -0.28
SRGAP2-217ENST00000624873 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
SRGAP2-217ENST00000624873 MINK1Q8N4C8 1332 aaPredicted RBP13.29□□□□□ -0.28
SRGAP2-217ENST00000624873 CDK13Q14004 1512 aaKnown RBP13.28□□□□□ -0.28
SRGAP2-217ENST00000624873 RALBP1Q15311 655 aa13.28□□□□□ -0.28
SRGAP2-217ENST00000624873 ST20-MTHFSA0A0A6YYL1 179 aa13.28□□□□□ -0.28
SRGAP2-217ENST00000624873 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
SRGAP2-217ENST00000624873 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.288e-6■□□□□ 10.6
SRGAP2-217ENST00000624873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.27□□□□□ -0.28
SRGAP2-217ENST00000624873 FTSJ3Q8IY81 847 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms