RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 RRP7BPQ9NSQ0 103 aa19.41■□□□□ 0.7
C3orf56-201ENST00000624688 CFDP1Q9UEE9 299 aaPredicted RBP19.4■□□□□ 0.7
C3orf56-201ENST00000624688 KDM6BO15054 1643 aa19.39■□□□□ 0.7
C3orf56-201ENST00000624688 ROCK1Q13464 1354 aa19.38■□□□□ 0.69
C3orf56-201ENST00000624688 UHRF1BP1LA0JNW5 1464 aa19.38■□□□□ 0.69
C3orf56-201ENST00000624688 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
C3orf56-201ENST00000624688 CROCC2H7BZ55 1655 aa19.35■□□□□ 0.69
C3orf56-201ENST00000624688 ZCCHC11Q5TAX3 1644 aaKnown RBP19.34■□□□□ 0.69
C3orf56-201ENST00000624688 ZNF777Q9ULD5 760 aaPredicted RBP19.32■□□□□ 0.68
C3orf56-201ENST00000624688 KDM5BQ9UGL1 1544 aa19.32■□□□□ 0.68
C3orf56-201ENST00000624688 ADGBQ8N7X0 1667 aa19.31■□□□□ 0.68
C3orf56-201ENST00000624688 SIN3AQ96ST3 1273 aa19.31■□□□□ 0.68
C3orf56-201ENST00000624688 CDC42BPBQ9Y5S2 1711 aa19.31■□□□□ 0.68
C3orf56-201ENST00000624688 PREX2Q70Z35 1606 aa19.31■□□□□ 0.68
C3orf56-201ENST00000624688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.3■□□□□ 0.68
C3orf56-201ENST00000624688 TTC37Q6PGP7 1564 aa19.3■□□□□ 0.68
C3orf56-201ENST00000624688 ADGRL2O95490 1459 aa19.29■□□□□ 0.68
C3orf56-201ENST00000624688 DENND4BO75064 1496 aaPredicted RBP19.28■□□□□ 0.68
C3orf56-201ENST00000624688 NCOA1Q15788 1441 aa19.26■□□□□ 0.67
C3orf56-201ENST00000624688 SAMD9LQ8IVG5 1584 aa19.26■□□□□ 0.67
C3orf56-201ENST00000624688 NEUROD1Q13562 356 aa19.25■□□□□ 0.67
C3orf56-201ENST00000624688 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
C3orf56-201ENST00000624688 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
C3orf56-201ENST00000624688 SHANK2Q9UPX8 1470 aa19.24■□□□□ 0.67
C3orf56-201ENST00000624688 ARHGEF5Q12774 1597 aa19.24■□□□□ 0.67
C3orf56-201ENST00000624688 TIMELESSQ9UNS1 1208 aa19.23■□□□□ 0.67
C3orf56-201ENST00000624688 MBD5Q9P267 1494 aa19.23■□□□□ 0.67
C3orf56-201ENST00000624688 MYO5CQ9NQX4 1742 aa19.22■□□□□ 0.67
C3orf56-201ENST00000624688 TRIM52Q96A61 297 aa19.22■□□□□ 0.67
C3orf56-201ENST00000624688 ANKRD30AQ9BXX3 1397 aa19.2■□□□□ 0.66
C3orf56-201ENST00000624688 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
C3orf56-201ENST00000624688 C9orf84Q5VXU9 1444 aa19.19■□□□□ 0.66
C3orf56-201ENST00000624688 MPHOSPH9Q99550 1183 aa19.19■□□□□ 0.66
C3orf56-201ENST00000624688 ARHGAP5Q13017 1502 aa19.19■□□□□ 0.66
C3orf56-201ENST00000624688 HNRNPMP52272 730 aaKnown RBP eCLIP19.18■□□□□ 0.66
C3orf56-201ENST00000624688 KCNH8Q96L42 1107 aa19.17■□□□□ 0.66
C3orf56-201ENST00000624688 CCDC141Q6ZP82 1450 aa19.15■□□□□ 0.66
C3orf56-201ENST00000624688 SYCP2Q9BX26 1530 aa19.15■□□□□ 0.66
C3orf56-201ENST00000624688 PLCH2O75038 1416 aa19.15■□□□□ 0.66
C3orf56-201ENST00000624688 PZPP20742 1482 aa19.13■□□□□ 0.65
C3orf56-201ENST00000624688 PPP1R15AO75807 674 aaPredicted RBP19.13■□□□□ 0.65
C3orf56-201ENST00000624688 WDR7Q9Y4E6 1490 aa19.12■□□□□ 0.65
C3orf56-201ENST00000624688 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
C3orf56-201ENST00000624688 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
C3orf56-201ENST00000624688 RSPH4AQ5TD94 716 aa19.12■□□□□ 0.65
C3orf56-201ENST00000624688 ANKRD50Q9ULJ7 1429 aa19.12■□□□□ 0.65
C3orf56-201ENST00000624688 KIAA1107Q9UPP5 1409 aa19.12■□□□□ 0.65
C3orf56-201ENST00000624688 MAST1Q9Y2H9 1570 aa19.11■□□□□ 0.65
C3orf56-201ENST00000624688 TONSLQ96HA7 1378 aa19.11■□□□□ 0.65
C3orf56-201ENST00000624688 PLEKHH2Q8IVE3 1493 aa19.1■□□□□ 0.65
C3orf56-201ENST00000624688 ARHGEF12Q9NZN5 1544 aa19.1■□□□□ 0.65
C3orf56-201ENST00000624688 FOXD1Q16676 465 aa19.08■□□□□ 0.64
C3orf56-201ENST00000624688 ANKRD30BQ9BXX2 1392 aa19.07■□□□□ 0.64
C3orf56-201ENST00000624688 KIF15Q9NS87 1388 aa19.07■□□□□ 0.64
C3orf56-201ENST00000624688 ARAP3Q8WWN8 1544 aa19.07■□□□□ 0.64
C3orf56-201ENST00000624688 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
C3orf56-201ENST00000624688 ABCC1P33527 1531 aa19.06■□□□□ 0.64
C3orf56-201ENST00000624688 ABCA9Q8IUA7 1624 aa19.05■□□□□ 0.64
C3orf56-201ENST00000624688 ASXL2Q76L83 1435 aa19.05■□□□□ 0.64
C3orf56-201ENST00000624688 EFCAB2Q5VUJ9 269 aa19.04■□□□□ 0.64
C3orf56-201ENST00000624688 KDM5DQ9BY66 1539 aa19.04■□□□□ 0.64
C3orf56-201ENST00000624688 PLXNC1O60486 1568 aa19.03■□□□□ 0.64
C3orf56-201ENST00000624688 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
C3orf56-201ENST00000624688 TRAPPC8Q9Y2L5 1435 aa18.99■□□□□ 0.63
C3orf56-201ENST00000624688 NUP155O75694 1391 aa18.98■□□□□ 0.63
C3orf56-201ENST00000624688 PKD2Q13563 968 aa18.95■□□□□ 0.62
C3orf56-201ENST00000624688 FANCAO15360 1455 aa18.95■□□□□ 0.62
C3orf56-201ENST00000624688 TEX14Q8IWB6 1497 aa18.95■□□□□ 0.62
C3orf56-201ENST00000624688 UNC13BO14795 1591 aa18.95■□□□□ 0.62
C3orf56-201ENST00000624688 DUOX2Q9NRD8 1548 aa18.94■□□□□ 0.62
C3orf56-201ENST00000624688 NPM1P06748 294 aaKnown RBP eCLIP18.94■□□□□ 0.62
C3orf56-201ENST00000624688 MIER1Q8N108 512 aa18.94■□□□□ 0.62
C3orf56-201ENST00000624688 L3MBTL2Q969R5 705 aa18.93■□□□□ 0.62
C3orf56-201ENST00000624688 FAM135AQ9P2D6 1515 aa18.91■□□□□ 0.62
C3orf56-201ENST00000624688 RTEL1-TNFRSF6BF6WH68 1400 aa18.9■□□□□ 0.62
C3orf56-201ENST00000624688 ZFYVE16Q7Z3T8 1539 aa18.9■□□□□ 0.62
C3orf56-201ENST00000624688 ERBINQ96RT1 1412 aa18.89■□□□□ 0.62
C3orf56-201ENST00000624688 AFAP1Q8N556 730 aa18.88■□□□□ 0.61
C3orf56-201ENST00000624688 MAGI2Q86UL8 1455 aa18.87■□□□□ 0.61
C3orf56-201ENST00000624688 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
C3orf56-201ENST00000624688 INO80Q9ULG1 1556 aaPredicted RBP18.87■□□□□ 0.61
C3orf56-201ENST00000624688 IQGAP3Q86VI3 1631 aa18.87■□□□□ 0.61
C3orf56-201ENST00000624688 SPAG9O60271 1321 aaKnown RBP18.86■□□□□ 0.61
C3orf56-201ENST00000624688 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
C3orf56-201ENST00000624688 RIMBP3CA6NJZ7 1639 aa18.84■□□□□ 0.61
C3orf56-201ENST00000624688 RIMBP3BA6NNM3 1639 aa18.84■□□□□ 0.61
C3orf56-201ENST00000624688 RIMBP3Q9UFD9 1639 aa18.84■□□□□ 0.61
C3orf56-201ENST00000624688 HIRIP3Q9BW71 556 aaPredicted RBP18.84■□□□□ 0.61
C3orf56-201ENST00000624688 ATP7AQ04656 1500 aa18.84■□□□□ 0.61
C3orf56-201ENST00000624688 NBPF8Q3BBV2 869 aa18.83■□□□□ 0.6
C3orf56-201ENST00000624688 CD109Q6YHK3 1445 aa18.82■□□□□ 0.6
C3orf56-201ENST00000624688 CFAP74Q9C0B2 1584 aa18.81■□□□□ 0.6
C3orf56-201ENST00000624688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.6
C3orf56-201ENST00000624688 DEPDC5O75140 1603 aa18.77■□□□□ 0.6
C3orf56-201ENST00000624688 PLA2R1Q13018 1463 aa18.77■□□□□ 0.6
C3orf56-201ENST00000624688 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.59
C3orf56-201ENST00000624688 KIDINS220Q9ULH0 1771 aa18.76■□□□□ 0.59
C3orf56-201ENST00000624688 ZNF518AQ6AHZ1 1483 aa18.75■□□□□ 0.59
C3orf56-201ENST00000624688 HSPA5P11021 654 aaKnown RBP18.75■□□□□ 0.59
C3orf56-201ENST00000624688 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms