RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 GSE1Q14687 1217 aa20.23■□□□□ 0.83
PMS1-221ENST00000624204 CFAP43Q8NDM7 1665 aa20.22■□□□□ 0.83
PMS1-221ENST00000624204 TMC1Q8TDI8 760 aa20.21■□□□□ 0.83
PMS1-221ENST00000624204 BACH2Q9BYV9 841 aa20.2■□□□□ 0.82
PMS1-221ENST00000624204 NBPF8Q3BBV2 869 aa20.2■□□□□ 0.82
PMS1-221ENST00000624204 NCAPD3P42695 1498 aa20.19■□□□□ 0.82
PMS1-221ENST00000624204 MPHOSPH9Q99550 1183 aa20.17■□□□□ 0.82
PMS1-221ENST00000624204 RRP1P56182 461 aaKnown RBP20.16■□□□□ 0.82
PMS1-221ENST00000624204 FRAT1Q92837 279 aaPredicted RBP20.16■□□□□ 0.82
PMS1-221ENST00000624204 NFKBIBQ15653 356 aa20.16■□□□□ 0.82
PMS1-221ENST00000624204 PLIN1O60240 522 aa20.15■□□□□ 0.82
PMS1-221ENST00000624204 FYCO1Q9BQS8 1478 aa20.14■□□□□ 0.82
PMS1-221ENST00000624204 CASKIN1Q8WXD9 1431 aa20.13■□□□□ 0.81
PMS1-221ENST00000624204 DDRGK1Q96HY6 314 aa20.12■□□□□ 0.81
PMS1-221ENST00000624204 RCAN3Q9UKA8 241 aa20.11■□□□□ 0.81
PMS1-221ENST00000624204 PNISRQ8TF01 805 aaKnown RBP20.1■□□□□ 0.81
PMS1-221ENST00000624204 MS4A1P11836 297 aa20.09■□□□□ 0.81
PMS1-221ENST00000624204 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
PMS1-221ENST00000624204 MYOM3Q5VTT5 1437 aa20.07■□□□□ 0.8
PMS1-221ENST00000624204 DHX29Q7Z478 1369 aaKnown RBP20.03■□□□□ 0.8
PMS1-221ENST00000624204 DENND4BO75064 1496 aaPredicted RBP20.03■□□□□ 0.8
PMS1-221ENST00000624204 ARID4BQ4LE39 1312 aaPredicted RBP20.01■□□□□ 0.79
PMS1-221ENST00000624204 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
PMS1-221ENST00000624204 CFTRP13569 1480 aa20■□□□□ 0.79
PMS1-221ENST00000624204 FRAT2O75474 233 aaPredicted RBP19.99■□□□□ 0.79
PMS1-221ENST00000624204 RGS3P49796 1198 aa19.99■□□□□ 0.79
PMS1-221ENST00000624204 RSPH6AQ9H0K4 717 aa19.99■□□□□ 0.79
PMS1-221ENST00000624204 SPATA31E1Q6ZUB1 1445 aa19.97■□□□□ 0.79
PMS1-221ENST00000624204 KDM2AQ9Y2K7 1162 aa19.97■□□□□ 0.79
PMS1-221ENST00000624204 CDCA7LQ96GN5 454 aa19.96■□□□□ 0.79
PMS1-221ENST00000624204 CRBNQ96SW2 442 aa19.95■□□□□ 0.78
PMS1-221ENST00000624204 USP47Q96K76 1375 aa19.94■□□□□ 0.78
PMS1-221ENST00000624204 DCAF11Q8TEB1 546 aa19.93■□□□□ 0.78
PMS1-221ENST00000624204 KDM6BO15054 1643 aa19.93■□□□□ 0.78
PMS1-221ENST00000624204 ANKRD30BQ9BXX2 1392 aa19.92■□□□□ 0.78
PMS1-221ENST00000624204 EFCAB5A4FU69 1503 aa19.92■□□□□ 0.78
PMS1-221ENST00000624204 FAM43AQ8N2R8 423 aa19.91■□□□□ 0.78
PMS1-221ENST00000624204 HECW1Q76N89 1606 aa19.9■□□□□ 0.78
PMS1-221ENST00000624204 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
PMS1-221ENST00000624204 SNAPC4Q5SXM2 1469 aa19.89■□□□□ 0.77
PMS1-221ENST00000624204 PKNOX2Q96KN3 472 aa19.88■□□□□ 0.77
PMS1-221ENST00000624204 TEX14Q8IWB6 1497 aa19.87■□□□□ 0.77
PMS1-221ENST00000624204 MYBBP1AQ9BQG0 1328 aaKnown RBP19.87■□□□□ 0.77
PMS1-221ENST00000624204 SPRYD3Q8NCJ5 442 aa19.86■□□□□ 0.77
PMS1-221ENST00000624204 SLKQ9H2G2 1235 aaPredicted RBP19.85■□□□□ 0.77
PMS1-221ENST00000624204 MIA2Q96PC5 1412 aa19.85■□□□□ 0.77
PMS1-221ENST00000624204 KIF15Q9NS87 1388 aa19.85■□□□□ 0.77
PMS1-221ENST00000624204 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
PMS1-221ENST00000624204 SUPT6HQ7KZ85 1726 aaKnown RBP19.84■□□□□ 0.77
PMS1-221ENST00000624204 LRPPRCP42704 1394 aaKnown RBP19.83■□□□□ 0.77
PMS1-221ENST00000624204 C20orf194Q5TEA3 1177 aa19.83■□□□□ 0.77
PMS1-221ENST00000624204 CARD11Q9BXL7 1154 aa19.83■□□□□ 0.77
PMS1-221ENST00000624204 PDE3BQ13370 1112 aa19.83■□□□□ 0.76
PMS1-221ENST00000624204 BRD4O60885 1362 aaPredicted RBP19.82■□□□□ 0.76
PMS1-221ENST00000624204 FAM161AQ3B820 660 aa19.82■□□□□ 0.76
PMS1-221ENST00000624204 NAP1L5Q96NT1 182 aaPredicted RBP19.81■□□□□ 0.76
PMS1-221ENST00000624204 GZF1Q9H116 711 aaPredicted RBP19.81■□□□□ 0.76
PMS1-221ENST00000624204 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
PMS1-221ENST00000624204 RALBP1Q15311 655 aa19.81■□□□□ 0.76
PMS1-221ENST00000624204 CC2D1BQ5T0F9 858 aaKnown RBP19.81■□□□□ 0.76
PMS1-221ENST00000624204 VSIG10Q8N0Z9 540 aa19.81■□□□□ 0.76
PMS1-221ENST00000624204 POGKQ9P215 609 aa19.8■□□□□ 0.76
PMS1-221ENST00000624204 GLIPR1L2Q4G1C9 344 aa19.8■□□□□ 0.76
PMS1-221ENST00000624204 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
PMS1-221ENST00000624204 EHBP1L1Q8N3D4 1523 aa19.79■□□□□ 0.76
PMS1-221ENST00000624204 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
PMS1-221ENST00000624204 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
PMS1-221ENST00000624204 ROCK2O75116 1388 aaKnown RBP19.78■□□□□ 0.76
PMS1-221ENST00000624204 GCC2Q8IWJ2 1684 aa19.77■□□□□ 0.76
PMS1-221ENST00000624204 BCORL1Q5H9F3 1711 aa19.77■□□□□ 0.76
PMS1-221ENST00000624204 NLRP13Q86W25 1043 aa19.77■□□□□ 0.76
PMS1-221ENST00000624204 UGGT2Q9NYU1 1516 aa19.77■□□□□ 0.76
PMS1-221ENST00000624204 RRAGDQ9NQL2 400 aaPredicted RBP19.77■□□□□ 0.75
PMS1-221ENST00000624204 C8orf34Q49A92 452 aa19.76■□□□□ 0.75
PMS1-221ENST00000624204 KTN1Q86UP2 1357 aaKnown RBP19.74■□□□□ 0.75
PMS1-221ENST00000624204 POLR1AO95602 1720 aaPredicted RBP19.74■□□□□ 0.75
PMS1-221ENST00000624204 CENPQQ7L2Z9 268 aaPredicted RBP19.74■□□□□ 0.75
PMS1-221ENST00000624204 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
PMS1-221ENST00000624204 ZNF644Q9H582 1327 aaPredicted RBP19.73■□□□□ 0.75
PMS1-221ENST00000624204 CADPSQ9ULU8 1353 aa19.72■□□□□ 0.75
PMS1-221ENST00000624204 MAGI3Q5TCQ9 1506 aa19.72■□□□□ 0.75
PMS1-221ENST00000624204 PKD2Q13563 968 aa19.71■□□□□ 0.75
PMS1-221ENST00000624204 TCOF1Q13428 1488 aaKnown RBP19.7■□□□□ 0.74
PMS1-221ENST00000624204 LRRIQ1Q96JM4 1722 aa19.7■□□□□ 0.74
PMS1-221ENST00000624204 KDM2BQ8NHM5 1336 aa19.69■□□□□ 0.74
PMS1-221ENST00000624204 ZMYND15Q9H091 742 aa19.66■□□□□ 0.74
PMS1-221ENST00000624204 L1TD1Q5T7N2 865 aaKnown RBP19.66■□□□□ 0.74
PMS1-221ENST00000624204 PNNQ9H307 717 aaKnown RBP19.66■□□□□ 0.74
PMS1-221ENST00000624204 CTTNBP2Q8WZ74 1663 aa19.65■□□□□ 0.74
PMS1-221ENST00000624204 RGL3Q3MIN7 710 aa19.65■□□□□ 0.74
PMS1-221ENST00000624204 HSP90AA2PQ14568 343 aaPredicted RBP19.64■□□□□ 0.73
PMS1-221ENST00000624204 DAPK1P53355 1430 aa19.63■□□□□ 0.73
PMS1-221ENST00000624204 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
PMS1-221ENST00000624204 ARID3AQ99856 593 aa19.62■□□□□ 0.73
PMS1-221ENST00000624204 BECN1Q14457 450 aa19.61■□□□□ 0.73
PMS1-221ENST00000624204 HSP90AA1P07900 732 aaKnown RBP19.6■□□□□ 0.73
PMS1-221ENST00000624204 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
PMS1-221ENST00000624204 KDM5CP41229 1560 aa19.6■□□□□ 0.73
PMS1-221ENST00000624204 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.59■□□□□ 0.73
PMS1-221ENST00000624204 ABCC5O15440 1437 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms