RNA–Protein interactions for RNA: ENST00000622062.1

WHAMMP3-204, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3, humanhuman

TSL 1 (best)

Gene WHAMMP3, Length 2,944 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMMP3-204ENST00000622062 PTPN23Q9H3S7 1636 aa11.95□□□□□ -0.5
WHAMMP3-204ENST00000622062 UACAQ9BZF9 1416 aa11.95□□□□□ -0.5
WHAMMP3-204ENST00000622062 DISP1Q96F81 1524 aa11.94□□□□□ -0.5
WHAMMP3-204ENST00000622062 PLEKHD1A6NEE1 506 aa11.93□□□□□ -0.5
WHAMMP3-204ENST00000622062 UGGT2Q9NYU1 1516 aa11.93□□□□□ -0.5
WHAMMP3-204ENST00000622062 POLR3GLQ9BT43 218 aa11.93□□□□□ -0.5
WHAMMP3-204ENST00000622062 HECW1Q76N89 1606 aa11.92□□□□□ -0.5
WHAMMP3-204ENST00000622062 L3MBTL2Q969R5 705 aa11.92□□□□□ -0.5
WHAMMP3-204ENST00000622062 NUP153P49790 1475 aaKnown RBP11.91□□□□□ -0.5
WHAMMP3-204ENST00000622062 ANP32CO43423 234 aa11.9□□□□□ -0.5
WHAMMP3-204ENST00000622062 TIMELESSQ9UNS1 1208 aa11.9□□□□□ -0.5
WHAMMP3-204ENST00000622062 HNRNPMP52272 730 aaKnown RBP eCLIP11.89□□□□□ -0.51
WHAMMP3-204ENST00000622062 SYNJ2O15056 1496 aa11.88□□□□□ -0.51
WHAMMP3-204ENST00000622062 BCANQ96GW7 911 aa11.88□□□□□ -0.51
WHAMMP3-204ENST00000622062 KDM6BO15054 1643 aa11.88□□□□□ -0.51
WHAMMP3-204ENST00000622062 CARMIL2Q6F5E8 1435 aa11.88□□□□□ -0.51
WHAMMP3-204ENST00000622062 KIAA0556O60303 1618 aa11.87□□□□□ -0.51
WHAMMP3-204ENST00000622062 HSPA5P11021 654 aaKnown RBP11.87□□□□□ -0.51
WHAMMP3-204ENST00000622062 CEP170Q5SW79 1584 aa11.86□□□□□ -0.51
WHAMMP3-204ENST00000622062 ABCC5O15440 1437 aa11.85□□□□□ -0.51
WHAMMP3-204ENST00000622062 MAGI1Q96QZ7 1491 aaPredicted RBP11.85□□□□□ -0.51
WHAMMP3-204ENST00000622062 DAPK1P53355 1430 aa11.85□□□□□ -0.51
WHAMMP3-204ENST00000622062 ZBTB22O15209 634 aa11.85□□□□□ -0.51
WHAMMP3-204ENST00000622062 ARXQ96QS3 562 aa11.85□□□□□ -0.51
WHAMMP3-204ENST00000622062 MIA2Q96PC5 1412 aa11.84□□□□□ -0.51
WHAMMP3-204ENST00000622062 TSPY4P0CV99 314 aa11.84□□□□□ -0.51
WHAMMP3-204ENST00000622062 TSPY10P0CW01 314 aa11.84□□□□□ -0.51
WHAMMP3-204ENST00000622062 PKD2Q13563 968 aa11.84□□□□□ -0.51
WHAMMP3-204ENST00000622062 TAOK2Q9UL54 1235 aa11.84□□□□□ -0.51
WHAMMP3-204ENST00000622062 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
WHAMMP3-204ENST00000622062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.51
WHAMMP3-204ENST00000622062 ARHGEF11O15085 1522 aa11.83□□□□□ -0.52
WHAMMP3-204ENST00000622062 EIF4G2P78344 907 aaKnown RBP eCLIP11.83□□□□□ -0.52
WHAMMP3-204ENST00000622062 NBPF8Q3BBV2 869 aa11.83□□□□□ -0.52
WHAMMP3-204ENST00000622062 RAPGEF6Q8TEU7 1601 aa11.82□□□□□ -0.52
WHAMMP3-204ENST00000622062 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
WHAMMP3-204ENST00000622062 TROQ12816 1431 aaPredicted RBP11.82□□□□□ -0.52
WHAMMP3-204ENST00000622062 PTPRGP23470 1445 aa11.81□□□□□ -0.52
WHAMMP3-204ENST00000622062 DENND4BO75064 1496 aaPredicted RBP11.8□□□□□ -0.52
WHAMMP3-204ENST00000622062 TCOF1Q13428 1488 aaKnown RBP11.8□□□□□ -0.52
WHAMMP3-204ENST00000622062 C11orf95C9JLR9 678 aaPredicted RBP11.8□□□□□ -0.52
WHAMMP3-204ENST00000622062 WASHC2AQ641Q2 1341 aa11.8□□□□□ -0.52
WHAMMP3-204ENST00000622062 SUPT16HQ9Y5B9 1047 aaKnown RBP11.79□□□□□ -0.52
WHAMMP3-204ENST00000622062 GPATCH8Q9UKJ3 1502 aaKnown RBP11.79□□□□□ -0.52
WHAMMP3-204ENST00000622062 KIF14Q15058 1648 aa11.78□□□□□ -0.52
WHAMMP3-204ENST00000622062 NUP155O75694 1391 aa11.77□□□□□ -0.52
WHAMMP3-204ENST00000622062 RGL3Q3MIN7 710 aa11.77□□□□□ -0.52
WHAMMP3-204ENST00000622062 CAMSAP2Q08AD1 1489 aa11.77□□□□□ -0.53
WHAMMP3-204ENST00000622062 ATP10BO94823 1461 aa11.77□□□□□ -0.53
WHAMMP3-204ENST00000622062 NUP160Q12769 1436 aa11.77□□□□□ -0.53
WHAMMP3-204ENST00000622062 HNRNPUQ00839 825 aaKnown RBP eCLIP11.76□□□□□ -0.53
WHAMMP3-204ENST00000622062 FKBP8Q14318 412 aa11.76□□□□□ -0.53
WHAMMP3-204ENST00000622062 NCOA1Q15788 1441 aa11.76□□□□□ -0.53
WHAMMP3-204ENST00000622062 ANKRD30BQ9BXX2 1392 aa11.75□□□□□ -0.53
WHAMMP3-204ENST00000622062 FAM9BQ8IZU0 186 aa11.75□□□□□ -0.53
WHAMMP3-204ENST00000622062 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
WHAMMP3-204ENST00000622062 ANKRD30AQ9BXX3 1397 aa11.75□□□□□ -0.53
WHAMMP3-204ENST00000622062 CCDC184Q52MB2 194 aa11.74□□□□□ -0.53
WHAMMP3-204ENST00000622062 AKNAQ7Z591 1439 aa11.74□□□□□ -0.53
WHAMMP3-204ENST00000622062 ANKRD50Q9ULJ7 1429 aa11.73□□□□□ -0.53
WHAMMP3-204ENST00000622062 ROCK1Q13464 1354 aa11.73□□□□□ -0.53
WHAMMP3-204ENST00000622062 DCAF11Q8TEB1 546 aa11.73□□□□□ -0.53
WHAMMP3-204ENST00000622062 IRX6P78412 446 aaPredicted RBP11.72□□□□□ -0.53
WHAMMP3-204ENST00000622062 MYT1Q01538 1121 aa11.71□□□□□ -0.54
WHAMMP3-204ENST00000622062 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
WHAMMP3-204ENST00000622062 OSCARQ8IYS5 282 aa11.7□□□□□ -0.54
WHAMMP3-204ENST00000622062 KDM5BQ9UGL1 1544 aa11.69□□□□□ -0.54
WHAMMP3-204ENST00000622062 DNMT1P26358 1616 aaKnown RBP11.69□□□□□ -0.54
WHAMMP3-204ENST00000622062 CCER2I3L3R5 266 aa11.69□□□□□ -0.54
WHAMMP3-204ENST00000622062 KIF15Q9NS87 1388 aa11.69□□□□□ -0.54
WHAMMP3-204ENST00000622062 C9orf84Q5VXU9 1444 aa11.69□□□□□ -0.54
WHAMMP3-204ENST00000622062 GCC2Q8IWJ2 1684 aa11.69□□□□□ -0.54
WHAMMP3-204ENST00000622062 MRS2Q9HD23 443 aa11.68□□□□□ -0.54
WHAMMP3-204ENST00000622062 CHD1O14646 1710 aa11.68□□□□□ -0.54
WHAMMP3-204ENST00000622062 CARD11Q9BXL7 1154 aa11.68□□□□□ -0.54
WHAMMP3-204ENST00000622062 RIMBP3CA6NJZ7 1639 aa11.67□□□□□ -0.54
WHAMMP3-204ENST00000622062 RIMBP3BA6NNM3 1639 aa11.67□□□□□ -0.54
WHAMMP3-204ENST00000622062 RIMBP3Q9UFD9 1639 aa11.67□□□□□ -0.54
WHAMMP3-204ENST00000622062 RPRD2Q5VT52 1461 aaKnown RBP11.67□□□□□ -0.54
WHAMMP3-204ENST00000622062 KIF7Q2M1P5 1343 aa11.67□□□□□ -0.54
WHAMMP3-204ENST00000622062 NEFLP07196 543 aa11.67□□□□□ -0.54
WHAMMP3-204ENST00000622062 ERCC6L2Q5T890 1561 aa11.66□□□□□ -0.54
WHAMMP3-204ENST00000622062 PZPP20742 1482 aa11.66□□□□□ -0.54
WHAMMP3-204ENST00000622062 CCDC7Q96M83 1385 aa11.64□□□□□ -0.55
WHAMMP3-204ENST00000622062 AFAP1Q8N556 730 aa11.64□□□□□ -0.55
WHAMMP3-204ENST00000622062 PRKRIP1Q9H875 184 aaPredicted RBP11.64□□□□□ -0.55
WHAMMP3-204ENST00000622062 KIAA1107Q9UPP5 1409 aa11.64□□□□□ -0.55
WHAMMP3-204ENST00000622062 ST20-MTHFSA0A0A6YYL1 179 aa11.63□□□□□ -0.55
WHAMMP3-204ENST00000622062 ABCA8O94911 1581 aa11.63□□□□□ -0.55
WHAMMP3-204ENST00000622062 CLASP1Q7Z460 1538 aa11.63□□□□□ -0.55
WHAMMP3-204ENST00000622062 USP47Q96K76 1375 aa11.62□□□□□ -0.55
WHAMMP3-204ENST00000622062 ABCC10Q5T3U5 1492 aa11.62□□□□□ -0.55
WHAMMP3-204ENST00000622062 ARHGAP5Q13017 1502 aa11.61□□□□□ -0.55
WHAMMP3-204ENST00000622062 TEX14Q8IWB6 1497 aa11.61□□□□□ -0.55
WHAMMP3-204ENST00000622062 NBPF1Q3BBV0 1214 aa11.6□□□□□ -0.55
WHAMMP3-204ENST00000622062 ITSN2Q9NZM3 1697 aa11.6□□□□□ -0.55
WHAMMP3-204ENST00000622062 TPRNQ4KMQ1 711 aa11.6□□□□□ -0.55
WHAMMP3-204ENST00000622062 CDC42BPAQ5VT25 1732 aa11.6□□□□□ -0.55
WHAMMP3-204ENST00000622062 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
WHAMMP3-204ENST00000622062 EFCAB2Q5VUJ9 269 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms