RNA–Protein interactions for RNA: ENST00000621734.4

GTF2I-221, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF2I, Length 4,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-221ENST00000621734 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
GTF2I-221ENST00000621734 CUX1P39880 1505 aa18.63■□□□□ 0.57
GTF2I-221ENST00000621734 CC2D1BQ5T0F9 858 aaKnown RBP18.62■□□□□ 0.57
GTF2I-221ENST00000621734 L3MBTL2Q969R5 705 aa18.62■□□□□ 0.57
GTF2I-221ENST00000621734 SOX12O15370 315 aa18.61■□□□□ 0.57
GTF2I-221ENST00000621734 PRG4Q92954 1404 aaPredicted RBP18.61■□□□□ 0.57
GTF2I-221ENST00000621734 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
GTF2I-221ENST00000621734 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
GTF2I-221ENST00000621734 NPM2Q86SE8 214 aaKnown RBP18.56■□□□□ 0.56
GTF2I-221ENST00000621734 MYT1Q01538 1121 aa18.55■□□□□ 0.56
GTF2I-221ENST00000621734 AFAP1Q8N556 730 aa18.54■□□□□ 0.56
GTF2I-221ENST00000621734 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
GTF2I-221ENST00000621734 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.53■□□□□ 0.56
GTF2I-221ENST00000621734 IRX6P78412 446 aaPredicted RBP18.53■□□□□ 0.56
GTF2I-221ENST00000621734 U2SURPO15042 1029 aaKnown RBP18.52■□□□□ 0.55
GTF2I-221ENST00000621734 NUDCQ9Y266 331 aa18.51■□□□□ 0.55
GTF2I-221ENST00000621734 EID1Q9Y6B2 187 aa18.51■□□□□ 0.55
GTF2I-221ENST00000621734 PRXQ9BXM0 1461 aa18.51■□□□□ 0.55
GTF2I-221ENST00000621734 ROCK2O75116 1388 aaKnown RBP18.5■□□□□ 0.55
GTF2I-221ENST00000621734 TOP2BQ02880 1626 aa18.5■□□□□ 0.55
GTF2I-221ENST00000621734 CCDC136Q96JN2 1154 aa18.49■□□□□ 0.55
GTF2I-221ENST00000621734 ARAP1Q96P48 1450 aa18.49■□□□□ 0.55
GTF2I-221ENST00000621734 KIF21BO75037 1637 aa18.48■□□□□ 0.55
GTF2I-221ENST00000621734 DNMBPQ6XZF7 1577 aa18.48■□□□□ 0.55
GTF2I-221ENST00000621734 PHLDB1Q86UU1 1377 aa18.48■□□□□ 0.55
GTF2I-221ENST00000621734 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
GTF2I-221ENST00000621734 MAPK8IP3Q9UPT6 1336 aa18.46■□□□□ 0.55
GTF2I-221ENST00000621734 MYOM3Q5VTT5 1437 aa18.45■□□□□ 0.54
GTF2I-221ENST00000621734 NUTM2FA1L443 756 aa18.45■□□□□ 0.54
GTF2I-221ENST00000621734 TRAK1Q9UPV9 953 aa18.45■□□□□ 0.54
GTF2I-221ENST00000621734 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
GTF2I-221ENST00000621734 LAS1LQ9Y4W2 734 aaKnown RBP18.45■□□□□ 0.54
GTF2I-221ENST00000621734 CASKIN1Q8WXD9 1431 aa18.44■□□□□ 0.54
GTF2I-221ENST00000621734 PAK3O75914 559 aaPredicted RBP18.44■□□□□ 0.54
GTF2I-221ENST00000621734 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
GTF2I-221ENST00000621734 ARXQ96QS3 562 aa18.43■□□□□ 0.54
GTF2I-221ENST00000621734 CCDC144AA2RUR9 1427 aa18.41■□□□□ 0.54
GTF2I-221ENST00000621734 PRDM2Q13029 1718 aa18.41■□□□□ 0.54
GTF2I-221ENST00000621734 KIF15Q9NS87 1388 aa18.41■□□□□ 0.54
GTF2I-221ENST00000621734 ERICH3Q5RHP9 1530 aa18.41■□□□□ 0.54
GTF2I-221ENST00000621734 RTL5Q5HYW3 569 aaPredicted RBP18.41■□□□□ 0.54
GTF2I-221ENST00000621734 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
GTF2I-221ENST00000621734 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
GTF2I-221ENST00000621734 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
GTF2I-221ENST00000621734 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.53
GTF2I-221ENST00000621734 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
GTF2I-221ENST00000621734 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
GTF2I-221ENST00000621734 VGFO15240 615 aaPredicted RBP18.37■□□□□ 0.53
GTF2I-221ENST00000621734 ST20-MTHFSA0A0A6YYL1 179 aa18.36■□□□□ 0.53
GTF2I-221ENST00000621734 NCOA2Q15596 1464 aa18.36■□□□□ 0.53
GTF2I-221ENST00000621734 PEG3Q9GZU2 1588 aa18.35■□□□□ 0.53
GTF2I-221ENST00000621734 URB2Q14146 1524 aaKnown RBP18.34■□□□□ 0.53
GTF2I-221ENST00000621734 KIAA0586Q9BVV6 1533 aa18.34■□□□□ 0.53
GTF2I-221ENST00000621734 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.53
GTF2I-221ENST00000621734 RAPGEF3O95398 923 aa18.33■□□□□ 0.53
GTF2I-221ENST00000621734 NGDNQ8NEJ9 315 aaKnown RBP18.32■□□□□ 0.52
GTF2I-221ENST00000621734 ANKRD50Q9ULJ7 1429 aa18.31■□□□□ 0.52
GTF2I-221ENST00000621734 SUPT16HQ9Y5B9 1047 aaKnown RBP18.31■□□□□ 0.52
GTF2I-221ENST00000621734 MYH16Q9H6N6 1097 aa18.29■□□□□ 0.52
GTF2I-221ENST00000621734 ANP32AP39687 249 aaKnown RBP18.29■□□□□ 0.52
GTF2I-221ENST00000621734 TERF2IPQ9NYB0 399 aa18.28■□□□□ 0.52
GTF2I-221ENST00000621734 FYCO1Q9BQS8 1478 aa18.27■□□□□ 0.52
GTF2I-221ENST00000621734 FRAT1Q92837 279 aaPredicted RBP18.27■□□□□ 0.52
GTF2I-221ENST00000621734 ARHGAP5Q13017 1502 aa18.27■□□□□ 0.52
GTF2I-221ENST00000621734 EIF3AQ14152 1382 aaKnown RBP18.27■□□□□ 0.52
GTF2I-221ENST00000621734 U2AF1L5P0DN76 240 aaPredicted RBP18.27■□□□□ 0.51
GTF2I-221ENST00000621734 U2AF1Q01081 240 aaKnown RBP eCLIP18.27■□□□□ 0.51
GTF2I-221ENST00000621734 UPF2Q9HAU5 1272 aaKnown RBP18.26■□□□□ 0.51
GTF2I-221ENST00000621734 KTN1Q86UP2 1357 aaKnown RBP18.26■□□□□ 0.51
GTF2I-221ENST00000621734 TROQ12816 1431 aaPredicted RBP18.26■□□□□ 0.51
GTF2I-221ENST00000621734 SCAPERQ9BY12 1400 aa18.25■□□□□ 0.51
GTF2I-221ENST00000621734 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.24■□□□□ 0.51
GTF2I-221ENST00000621734 PNNQ9H307 717 aaKnown RBP18.24■□□□□ 0.51
GTF2I-221ENST00000621734 FTSJ3Q8IY81 847 aaKnown RBP18.24■□□□□ 0.51
GTF2I-221ENST00000621734 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
GTF2I-221ENST00000621734 CSB-PGBD3P0DP91 1061 aa18.23■□□□□ 0.51
GTF2I-221ENST00000621734 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
GTF2I-221ENST00000621734 EFCAB5A4FU69 1503 aa18.22■□□□□ 0.51
GTF2I-221ENST00000621734 HSP90AA1P07900 732 aaKnown RBP18.22■□□□□ 0.51
GTF2I-221ENST00000621734 GRIN2AQ12879 1464 aa18.21■□□□□ 0.51
GTF2I-221ENST00000621734 PLB1Q6P1J6 1458 aa18.18■□□□□ 0.5
GTF2I-221ENST00000621734 CCER2I3L3R5 266 aa18.18■□□□□ 0.5
GTF2I-221ENST00000621734 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
GTF2I-221ENST00000621734 RALBP1Q15311 655 aa18.17■□□□□ 0.5
GTF2I-221ENST00000621734 PANK3Q9H999 370 aa18.17■□□□□ 0.5
GTF2I-221ENST00000621734 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
GTF2I-221ENST00000621734 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
GTF2I-221ENST00000621734 LTV1Q96GA3 475 aaPredicted RBP18.15■□□□□ 0.5
GTF2I-221ENST00000621734 CDK13Q14004 1512 aaKnown RBP18.14■□□□□ 0.49
GTF2I-221ENST00000621734 IQGAP2Q13576 1575 aa18.14■□□□□ 0.49
GTF2I-221ENST00000621734 USP47Q96K76 1375 aa18.13■□□□□ 0.49
GTF2I-221ENST00000621734 AMPHP49418 695 aa18.13■□□□□ 0.49
GTF2I-221ENST00000621734 EVC2Q86UK5 1308 aa18.12■□□□□ 0.49
GTF2I-221ENST00000621734 EPRSP07814 1512 aaKnown RBP18.12■□□□□ 0.49
GTF2I-221ENST00000621734 CCDC9Q9Y3X0 531 aaKnown RBP18.12■□□□□ 0.49
GTF2I-221ENST00000621734 C9orf84Q5VXU9 1444 aa18.12■□□□□ 0.49
GTF2I-221ENST00000621734 NLRP13Q86W25 1043 aa18.11■□□□□ 0.49
GTF2I-221ENST00000621734 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.11■□□□□ 0.49
GTF2I-221ENST00000621734 NPHP1O15259 732 aa18.1■□□□□ 0.49
GTF2I-221ENST00000621734 MIA2Q96PC5 1412 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms