RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 DAPK1P53355 1430 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 NUP160Q12769 1436 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 SYNJ2O15056 1496 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 PZPP20742 1482 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 CAMSAP2Q08AD1 1489 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 ROCK1Q13464 1354 aa4.68□□□□□ -1.66
U1.39-201ENST00000621562 KDM5DQ9BY66 1539 aa4.68□□□□□ -1.66
U1.39-201ENST00000621562 ABCC5O15440 1437 aa4.68□□□□□ -1.66
U1.39-201ENST00000621562 ABCC10Q5T3U5 1492 aa4.68□□□□□ -1.66
U1.39-201ENST00000621562 ARHGEF5Q12774 1597 aa4.67□□□□□ -1.66
U1.39-201ENST00000621562 KCNH8Q96L42 1107 aa4.67□□□□□ -1.66
U1.39-201ENST00000621562 RPRD2Q5VT52 1461 aaKnown RBP4.67□□□□□ -1.66
U1.39-201ENST00000621562 SHANK2Q9UPX8 1470 aa4.67□□□□□ -1.66
U1.39-201ENST00000621562 KDM5CP41229 1560 aa4.66□□□□□ -1.66
U1.39-201ENST00000621562 TROQ12816 1431 aaPredicted RBP4.66□□□□□ -1.66
U1.39-201ENST00000621562 GPATCH8Q9UKJ3 1502 aaKnown RBP4.66□□□□□ -1.66
U1.39-201ENST00000621562 UNC13BO14795 1591 aa4.65□□□□□ -1.66
U1.39-201ENST00000621562 SAMD9LQ8IVG5 1584 aa4.65□□□□□ -1.66
U1.39-201ENST00000621562 MAST1Q9Y2H9 1570 aa4.65□□□□□ -1.66
U1.39-201ENST00000621562 PLB1Q6P1J6 1458 aa4.65□□□□□ -1.66
U1.39-201ENST00000621562 SUPT16HQ9Y5B9 1047 aaKnown RBP4.65□□□□□ -1.67
U1.39-201ENST00000621562 TONSLQ96HA7 1378 aa4.65□□□□□ -1.67
U1.39-201ENST00000621562 ANKRD30BQ9BXX2 1392 aa4.65□□□□□ -1.67
U1.39-201ENST00000621562 ATP1B4Q9UN42 357 aaPredicted RBP4.64□□□□□ -1.67
U1.39-201ENST00000621562 PLXNC1O60486 1568 aa4.64□□□□□ -1.67
U1.39-201ENST00000621562 TTC37Q6PGP7 1564 aa4.64□□□□□ -1.67
U1.39-201ENST00000621562 TRPM1Q7Z4N2 1603 aa4.64□□□□□ -1.67
U1.39-201ENST00000621562 RNF17Q9BXT8 1623 aaKnown RBP4.64□□□□□ -1.67
U1.39-201ENST00000621562 NCOA1Q15788 1441 aa4.63□□□□□ -1.67
U1.39-201ENST00000621562 SPATA31E1Q6ZUB1 1445 aa4.63□□□□□ -1.67
U1.39-201ENST00000621562 PRG4Q92954 1404 aaPredicted RBP4.63□□□□□ -1.67
U1.39-201ENST00000621562 CNTLNQ9NXG0 1405 aa4.63□□□□□ -1.67
U1.39-201ENST00000621562 CCER2I3L3R5 266 aa4.63□□□□□ -1.67
U1.39-201ENST00000621562 LAMC1P11047 1609 aa4.63□□□□□ -1.67
U1.39-201ENST00000621562 ARHGEF12Q9NZN5 1544 aa4.62□□□□□ -1.67
U1.39-201ENST00000621562 IQGAP3Q86VI3 1631 aa4.62□□□□□ -1.67
U1.39-201ENST00000621562 DDX10Q13206 875 aaKnown RBP4.62□□□□□ -1.67
U1.39-201ENST00000621562 RRP7BPQ9NSQ0 103 aa4.62□□□□□ -1.67
U1.39-201ENST00000621562 PTPRGP23470 1445 aa4.62□□□□□ -1.67
U1.39-201ENST00000621562 ATP10BO94823 1461 aa4.62□□□□□ -1.67
U1.39-201ENST00000621562 ERCC6Q03468 1493 aa4.62□□□□□ -1.67
U1.39-201ENST00000621562 WASHC2AQ641Q2 1341 aa4.61□□□□□ -1.67
U1.39-201ENST00000621562 KIAA1107Q9UPP5 1409 aa4.61□□□□□ -1.67
U1.39-201ENST00000621562 RALGAPBQ86X10 1494 aa4.61□□□□□ -1.67
U1.39-201ENST00000621562 ERCC6L2Q5T890 1561 aa4.61□□□□□ -1.67
U1.39-201ENST00000621562 CEP152O94986 1710 aa4.6□□□□□ -1.67
U1.39-201ENST00000621562 SPHKAPQ2M3C7 1700 aa4.6□□□□□ -1.67
U1.39-201ENST00000621562 HIRIP3Q9BW71 556 aaPredicted RBP4.6□□□□□ -1.67
U1.39-201ENST00000621562 ZNF644Q9H582 1327 aaPredicted RBP4.6□□□□□ -1.67
U1.39-201ENST00000621562 CCDC7Q96M83 1385 aa4.6□□□□□ -1.67
U1.39-201ENST00000621562 UHRF1BP1Q6BDS2 1440 aa4.6□□□□□ -1.67
U1.39-201ENST00000621562 MAGI2Q86UL8 1455 aa4.6□□□□□ -1.67
U1.39-201ENST00000621562 CLASP1Q7Z460 1538 aa4.6□□□□□ -1.67
U1.39-201ENST00000621562 DEPDC5O75140 1603 aa4.6□□□□□ -1.67
U1.39-201ENST00000621562 ZCCHC11Q5TAX3 1644 aaKnown RBP4.6□□□□□ -1.67
U1.39-201ENST00000621562 IQGAP1P46940 1657 aa4.6□□□□□ -1.67
U1.39-201ENST00000621562 HSPA5P11021 654 aaKnown RBP4.59□□□□□ -1.67
U1.39-201ENST00000621562 C9orf84Q5VXU9 1444 aa4.59□□□□□ -1.67
U1.39-201ENST00000621562 CARMIL2Q6F5E8 1435 aa4.59□□□□□ -1.67
U1.39-201ENST00000621562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.59□□□□□ -1.67
U1.39-201ENST00000621562 MPHOSPH9Q99550 1183 aa4.59□□□□□ -1.67
U1.39-201ENST00000621562 SYCP2Q9BX26 1530 aa4.59□□□□□ -1.67
U1.39-201ENST00000621562 IFT172Q9UG01 1749 aa4.59□□□□□ -1.67
U1.39-201ENST00000621562 CHIC2Q9UKJ5 165 aa4.59□□□□□ -1.67
U1.39-201ENST00000621562 ABCC2Q92887 1545 aa4.58□□□□□ -1.68
U1.39-201ENST00000621562 CCDC141Q6ZP82 1450 aa4.58□□□□□ -1.68
U1.39-201ENST00000621562 DHX29Q7Z478 1369 aaKnown RBP4.58□□□□□ -1.68
U1.39-201ENST00000621562 NBPF8Q3BBV2 869 aa4.58□□□□□ -1.68
U1.39-201ENST00000621562 TSHZ2Q9NRE2 1034 aa4.58□□□□□ -1.68
U1.39-201ENST00000621562 MYOM1P52179 1685 aa4.57□□□□□ -1.68
U1.39-201ENST00000621562 ABCC1P33527 1531 aa4.57□□□□□ -1.68
U1.39-201ENST00000621562 FAM135AQ9P2D6 1515 aa4.57□□□□□ -1.68
U1.39-201ENST00000621562 C11orf95C9JLR9 678 aaPredicted RBP4.57□□□□□ -1.68
U1.39-201ENST00000621562 L3MBTL2Q969R5 705 aa4.57□□□□□ -1.68
U1.39-201ENST00000621562 ABCA9Q8IUA7 1624 aa4.57□□□□□ -1.68
U1.39-201ENST00000621562 MADDQ8WXG6 1647 aa4.57□□□□□ -1.68
U1.39-201ENST00000621562 INO80Q9ULG1 1556 aaPredicted RBP4.57□□□□□ -1.68
U1.39-201ENST00000621562 PRDM15P57071 1507 aaPredicted RBP4.56□□□□□ -1.68
U1.39-201ENST00000621562 ANKRD50Q9ULJ7 1429 aa4.56□□□□□ -1.68
U1.39-201ENST00000621562 KIAA1210Q9ULL0 1709 aa4.56□□□□□ -1.68
U1.39-201ENST00000621562 ARID3CA6NKF2 412 aa4.56□□□□□ -1.68
U1.39-201ENST00000621562 FOXD1Q16676 465 aa4.56□□□□□ -1.68
U1.39-201ENST00000621562 EIF2AK4Q9P2K8 1649 aaKnown RBP4.56□□□□□ -1.68
U1.39-201ENST00000621562 ANKRD30AQ9BXX3 1397 aa4.55□□□□□ -1.68
U1.39-201ENST00000621562 TET3O43151 1660 aa4.55□□□□□ -1.68
U1.39-201ENST00000621562 ZC3H13Q5T200 1668 aaKnown RBP4.55□□□□□ -1.68
U1.39-201ENST00000621562 KIF7Q2M1P5 1343 aa4.55□□□□□ -1.68
U1.39-201ENST00000621562 MROH1Q8NDA8 1641 aa4.55□□□□□ -1.68
U1.39-201ENST00000621562 ANP32CO43423 234 aa4.55□□□□□ -1.68
U1.39-201ENST00000621562 ARAP3Q8WWN8 1544 aa4.55□□□□□ -1.68
U1.39-201ENST00000621562 PLA2R1Q13018 1463 aa4.55□□□□□ -1.68
U1.39-201ENST00000621562 MROH2AA6NES4 1674 aa4.54□□□□□ -1.68
U1.39-201ENST00000621562 CLTCL1P53675 1640 aa4.54□□□□□ -1.68
U1.39-201ENST00000621562 VWDEQ8N2E2 1590 aa4.54□□□□□ -1.68
U1.39-201ENST00000621562 KIF1BO60333 1816 aa4.54□□□□□ -1.68
U1.39-201ENST00000621562 EIF4G2P78344 907 aaKnown RBP eCLIP4.54□□□□□ -1.68
U1.39-201ENST00000621562 CCDC184Q52MB2 194 aa4.54□□□□□ -1.68
U1.39-201ENST00000621562 TRIM52Q96A61 297 aa4.54□□□□□ -1.68
U1.39-201ENST00000621562 JPH4Q96JJ6 628 aa4.54□□□□□ -1.68
U1.39-201ENST00000621562 ZFYVE16Q7Z3T8 1539 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms