RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 SCAPERQ9BY12 1400 aa26.13■■□□□ 1.77
SNHG28-203ENST00000621242 PLCH2O75038 1416 aa26.11■■□□□ 1.77
SNHG28-203ENST00000621242 CERKQ8TCT0 537 aa26.09■■□□□ 1.77
SNHG28-203ENST00000621242 MYO5CQ9NQX4 1742 aa26.05■■□□□ 1.76
SNHG28-203ENST00000621242 ATP10AO60312 1499 aa26.04■■□□□ 1.76
SNHG28-203ENST00000621242 ARHGEF12Q9NZN5 1544 aa26.04■■□□□ 1.76
SNHG28-203ENST00000621242 PREX1Q8TCU6 1659 aa26.03■■□□□ 1.76
SNHG28-203ENST00000621242 ATP1B4Q9UN42 357 aaPredicted RBP26.02■■□□□ 1.76
SNHG28-203ENST00000621242 C9orf84Q5VXU9 1444 aa26.02■■□□□ 1.76
SNHG28-203ENST00000621242 EFCAB2Q5VUJ9 269 aa26.01■■□□□ 1.75
SNHG28-203ENST00000621242 CEBPAP49715 358 aaPredicted RBP26■■□□□ 1.75
SNHG28-203ENST00000621242 KIF14Q15058 1648 aa25.96■■□□□ 1.75
SNHG28-203ENST00000621242 EHMT2Q96KQ7 1210 aa25.95■■□□□ 1.74
SNHG28-203ENST00000621242 SETD1BQ9UPS6 1966 aaKnown RBP25.94■■□□□ 1.74
SNHG28-203ENST00000621242 FMN1Q68DA7 1419 aa25.94■■□□□ 1.74
SNHG28-203ENST00000621242 STRCQ7RTU9 1775 aa25.94■■□□□ 1.74
SNHG28-203ENST00000621242 CDK11AQ9UQ88 783 aaPredicted RBP25.93■■□□□ 1.74
SNHG28-203ENST00000621242 ZNF518AQ6AHZ1 1483 aa25.92■■□□□ 1.74
SNHG28-203ENST00000621242 UBTFP17480 764 aaKnown RBP25.91■■□□□ 1.74
SNHG28-203ENST00000621242 AFAP1Q8N556 730 aa25.91■■□□□ 1.74
SNHG28-203ENST00000621242 ARHGAP5Q13017 1502 aa25.9■■□□□ 1.74
SNHG28-203ENST00000621242 KDM5CP41229 1560 aa25.9■■□□□ 1.74
SNHG28-203ENST00000621242 ARHGAP35Q9NRY4 1499 aa25.89■■□□□ 1.73
SNHG28-203ENST00000621242 MYT1LQ9UL68 1186 aa25.88■■□□□ 1.73
SNHG28-203ENST00000621242 DMRT2Q9Y5R5 561 aa25.87■■□□□ 1.73
SNHG28-203ENST00000621242 LRRIQ1Q96JM4 1722 aa25.87■■□□□ 1.73
SNHG28-203ENST00000621242 TROQ12816 1431 aaPredicted RBP25.87■■□□□ 1.73
SNHG28-203ENST00000621242 DIP2CQ9Y2E4 1556 aa25.86■■□□□ 1.73
SNHG28-203ENST00000621242 UHRF1BP1Q6BDS2 1440 aa25.86■■□□□ 1.73
SNHG28-203ENST00000621242 CDC42BPBQ9Y5S2 1711 aa25.85■■□□□ 1.73
SNHG28-203ENST00000621242 CLIP1P30622 1438 aa25.82■■□□□ 1.72
SNHG28-203ENST00000621242 ABCA6Q8N139 1617 aa25.82■■□□□ 1.72
SNHG28-203ENST00000621242 C3P01024 1663 aa25.82■■□□□ 1.72
SNHG28-203ENST00000621242 REREQ9P2R6 1566 aa25.82■■□□□ 1.72
SNHG28-203ENST00000621242 DISP3Q9P2K9 1392 aa25.78■■□□□ 1.72
SNHG28-203ENST00000621242 MLH3Q9UHC1 1453 aa25.78■■□□□ 1.72
SNHG28-203ENST00000621242 ILDR2Q71H61 639 aa25.75■■□□□ 1.71
SNHG28-203ENST00000621242 PREX2Q70Z35 1606 aa25.74■■□□□ 1.71
SNHG28-203ENST00000621242 TRAPPC8Q9Y2L5 1435 aa25.74■■□□□ 1.71
SNHG28-203ENST00000621242 ESF1Q9H501 851 aaKnown RBP25.74■■□□□ 1.71
SNHG28-203ENST00000621242 ITSN2Q9NZM3 1697 aa25.74■■□□□ 1.71
SNHG28-203ENST00000621242 AGLP35573 1532 aa25.73■■□□□ 1.71
SNHG28-203ENST00000621242 PTPRTO14522 1441 aa25.73■■□□□ 1.71
SNHG28-203ENST00000621242 ABCC1P33527 1531 aa25.73■■□□□ 1.71
SNHG28-203ENST00000621242 KIDINS220Q9ULH0 1771 aa25.7■■□□□ 1.7
SNHG28-203ENST00000621242 CDC42BPAQ5VT25 1732 aa25.67■■□□□ 1.7
SNHG28-203ENST00000621242 LTBP4Q8N2S1 1624 aa25.66■■□□□ 1.7
SNHG28-203ENST00000621242 SOCS7O14512 581 aa25.64■■□□□ 1.7
SNHG28-203ENST00000621242 CCDC18Q5T9S5 1454 aa25.63■■□□□ 1.69
SNHG28-203ENST00000621242 NCOA1Q15788 1441 aa25.63■■□□□ 1.69
SNHG28-203ENST00000621242 CNTLNQ9NXG0 1405 aa25.63■■□□□ 1.69
SNHG28-203ENST00000621242 CASKIN1Q8WXD9 1431 aa25.62■■□□□ 1.69
SNHG28-203ENST00000621242 SPATA31D1Q6ZQQ2 1576 aa25.61■■□□□ 1.69
SNHG28-203ENST00000621242 MROH2AA6NES4 1674 aa25.58■■□□□ 1.69
SNHG28-203ENST00000621242 SAMD9LQ8IVG5 1584 aa25.58■■□□□ 1.69
SNHG28-203ENST00000621242 SUPT6HQ7KZ85 1726 aaKnown RBP25.57■■□□□ 1.68
SNHG28-203ENST00000621242 CAMSAP1Q5T5Y3 1602 aa25.57■■□□□ 1.68
SNHG28-203ENST00000621242 ZNF777Q9ULD5 760 aaPredicted RBP25.57■■□□□ 1.68
SNHG28-203ENST00000621242 IQSEC2Q5JU85 1478 aa25.56■■□□□ 1.68
SNHG28-203ENST00000621242 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
SNHG28-203ENST00000621242 ZMYM3Q14202 1370 aa25.54■■□□□ 1.68
SNHG28-203ENST00000621242 NPATQ14207 1427 aa25.54■■□□□ 1.68
SNHG28-203ENST00000621242 SYCP2Q9BX26 1530 aa25.53■■□□□ 1.68
SNHG28-203ENST00000621242 HNRNPMP52272 730 aaKnown RBP eCLIP25.51■■□□□ 1.67
SNHG28-203ENST00000621242 SPAG9O60271 1321 aaKnown RBP25.51■■□□□ 1.67
SNHG28-203ENST00000621242 CLTCQ00610 1675 aaKnown RBP25.51■■□□□ 1.67
SNHG28-203ENST00000621242 NCKAP5LQ9HCH0 1330 aa25.5■■□□□ 1.67
SNHG28-203ENST00000621242 GPATCH8Q9UKJ3 1502 aaKnown RBP25.49■■□□□ 1.67
SNHG28-203ENST00000621242 FYCO1Q9BQS8 1478 aa25.48■■□□□ 1.67
SNHG28-203ENST00000621242 ATP7AQ04656 1500 aa25.47■■□□□ 1.67
SNHG28-203ENST00000621242 ZNF335Q9H4Z2 1342 aaPredicted RBP25.46■■□□□ 1.67
SNHG28-203ENST00000621242 MYO3AQ8NEV4 1616 aa25.45■■□□□ 1.67
SNHG28-203ENST00000621242 ZNF142P52746 1687 aaPredicted RBP25.45■■□□□ 1.66
SNHG28-203ENST00000621242 PLXNC1O60486 1568 aa25.44■■□□□ 1.66
SNHG28-203ENST00000621242 INO80Q9ULG1 1556 aaPredicted RBP25.44■■□□□ 1.66
SNHG28-203ENST00000621242 A2MP01023 1474 aa25.42■■□□□ 1.66
SNHG28-203ENST00000621242 KIAA1107Q9UPP5 1409 aa25.41■■□□□ 1.66
SNHG28-203ENST00000621242 GGT6Q6P531 493 aa25.41■■□□□ 1.66
SNHG28-203ENST00000621242 CFDP1Q9UEE9 299 aaPredicted RBP25.41■■□□□ 1.66
SNHG28-203ENST00000621242 CEP170BQ9Y4F5 1589 aaPredicted RBP25.4■■□□□ 1.66
SNHG28-203ENST00000621242 PTPRKQ15262 1439 aa25.4■■□□□ 1.66
SNHG28-203ENST00000621242 UBAP1LF5GYI3 381 aa25.4■■□□□ 1.66
SNHG28-203ENST00000621242 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
SNHG28-203ENST00000621242 PKD2Q13563 968 aa25.39■■□□□ 1.66
SNHG28-203ENST00000621242 PLEKHH2Q8IVE3 1493 aa25.39■■□□□ 1.65
SNHG28-203ENST00000621242 TCOF1Q13428 1488 aaKnown RBP25.37■■□□□ 1.65
SNHG28-203ENST00000621242 CCNB3Q8WWL7 1395 aa25.36■■□□□ 1.65
SNHG28-203ENST00000621242 ADGBQ8N7X0 1667 aa25.36■■□□□ 1.65
SNHG28-203ENST00000621242 PPP6R1Q9UPN7 881 aa25.31■■□□□ 1.64
SNHG28-203ENST00000621242 ZNF644Q9H582 1327 aaPredicted RBP25.29■■□□□ 1.64
SNHG28-203ENST00000621242 DNMT1P26358 1616 aaKnown RBP25.29■■□□□ 1.64
SNHG28-203ENST00000621242 MTUS2Q5JR59 1369 aa25.28■■□□□ 1.64
SNHG28-203ENST00000621242 A2ML1A8K2U0 1454 aa25.28■■□□□ 1.64
SNHG28-203ENST00000621242 POLR1AO95602 1720 aaPredicted RBP25.24■■□□□ 1.63
SNHG28-203ENST00000621242 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
SNHG28-203ENST00000621242 MBD5Q9P267 1494 aa25.24■■□□□ 1.63
SNHG28-203ENST00000621242 RTEL1-TNFRSF6BF6WH68 1400 aa25.2■■□□□ 1.63
SNHG28-203ENST00000621242 DHX29Q7Z478 1369 aaKnown RBP25.2■■□□□ 1.63
SNHG28-203ENST00000621242 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
SNHG28-203ENST00000621242 FBXO31Q5XUX0 539 aaPredicted RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms