RNA–Protein interactions for RNA: ENST00000620389.1

SRSF3-207, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-207ENST00000620389 NAP1L2Q9ULW6 460 aaPredicted RBP11.17□□□□□ -0.62
SRSF3-207ENST00000620389 GOLGA6L3A6NEY3 463 aa11.16□□□□□ -0.62
SRSF3-207ENST00000620389 ESPNB1AK53 854 aa11.16□□□□□ -0.62
SRSF3-207ENST00000620389 GTF2E1P29083 439 aaPredicted RBP11.16□□□□□ -0.62
SRSF3-207ENST00000620389 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
SRSF3-207ENST00000620389 SYNJ1O43426 1573 aa11.15□□□□□ -0.62
SRSF3-207ENST00000620389 FSD2A1L4K1 749 aa11.15□□□□□ -0.62
SRSF3-207ENST00000620389 ERBB4Q15303 1308 aa11.14□□□□□ -0.63
SRSF3-207ENST00000620389 CHMP4BQ9H444 224 aaKnown RBP11.13□□□□□ -0.63
SRSF3-207ENST00000620389 SMAP1Q8IYB5 467 aaPredicted RBP11.12□□□□□ -0.63
SRSF3-207ENST00000620389 CANXP27824 592 aaKnown RBP11.12□□□□□ -0.63
SRSF3-207ENST00000620389 STAC3Q96MF2 364 aa11.12□□□□□ -0.63
SRSF3-207ENST00000620389 ZHX1Q9UKY1 873 aaPredicted RBP11.12□□□□□ -0.63
SRSF3-207ENST00000620389 EIF4G2P78344 907 aaKnown RBP eCLIP11.11□□□□□ -0.63
SRSF3-207ENST00000620389 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
SRSF3-207ENST00000620389 TOP2AP11388 1531 aaKnown RBP11.11□□□□□ -0.63
SRSF3-207ENST00000620389 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
SRSF3-207ENST00000620389 MAP7D2Q96T17 732 aa11.11□□□□□ -0.63
SRSF3-207ENST00000620389 ERICH3Q5RHP9 1530 aa11.1□□□□□ -0.63
SRSF3-207ENST00000620389 FAM161AQ3B820 660 aa11.1□□□□□ -0.63
SRSF3-207ENST00000620389 C8orf34Q49A92 452 aa11.1□□□□□ -0.63
SRSF3-207ENST00000620389 CCDC7Q96M83 1385 aa11.1□□□□□ -0.63
SRSF3-207ENST00000620389 MYH16Q9H6N6 1097 aa11.09□□□□□ -0.63
SRSF3-207ENST00000620389 RCAN3Q9UKA8 241 aa11.09□□□□□ -0.63
SRSF3-207ENST00000620389 KDM5BQ9UGL1 1544 aa11.09□□□□□ -0.63
SRSF3-207ENST00000620389 FAM50AQ14320 339 aaKnown RBP11.08□□□□□ -0.64
SRSF3-207ENST00000620389 NCOA1Q15788 1441 aa11.08□□□□□ -0.64
SRSF3-207ENST00000620389 MRE11P49959 708 aa11.08□□□□□ -0.64
SRSF3-207ENST00000620389 CNGB1Q14028 1251 aaPredicted RBP11.08□□□□□ -0.64
SRSF3-207ENST00000620389 RIPK4P57078 832 aa11.07□□□□□ -0.64
SRSF3-207ENST00000620389 IPO4Q8TEX9 1081 aaKnown RBP11.07□□□□□ -0.64
SRSF3-207ENST00000620389 NCLP19338 710 aaKnown RBP11.07□□□□□ -0.64
SRSF3-207ENST00000620389 TRIM44Q96DX7 344 aaPredicted RBP11.06□□□□□ -0.64
SRSF3-207ENST00000620389 MAP3K1Q13233 1512 aa11.05□□□□□ -0.64
SRSF3-207ENST00000620389 GZF1Q9H116 711 aaPredicted RBP11.05□□□□□ -0.64
SRSF3-207ENST00000620389 SLKQ9H2G2 1235 aaPredicted RBP11.05□□□□□ -0.64
SRSF3-207ENST00000620389 FAM13BQ9NYF5 915 aa11.05□□□□□ -0.64
SRSF3-207ENST00000620389 UTP14CQ5TAP6 766 aaKnown RBP11.05□□□□□ -0.64
SRSF3-207ENST00000620389 KTN1Q86UP2 1357 aaKnown RBP11.04□□□□□ -0.64
SRSF3-207ENST00000620389 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
SRSF3-207ENST00000620389 PHLDB1Q86UU1 1377 aa11.04□□□□□ -0.64
SRSF3-207ENST00000620389 TERF1P54274 439 aa11.03□□□□□ -0.64
SRSF3-207ENST00000620389 PNISRQ8TF01 805 aaKnown RBP11.03□□□□□ -0.64
SRSF3-207ENST00000620389 GRPEL1Q9HAV7 217 aa11.03□□□□□ -0.64
SRSF3-207ENST00000620389 DMTNQ08495 405 aa11.02□□□□□ -0.64
SRSF3-207ENST00000620389 PRDM10Q9NQV6 1147 aa11.02□□□□□ -0.64
SRSF3-207ENST00000620389 ANTXR1Q9H6X2 564 aa11.02□□□□□ -0.65
SRSF3-207ENST00000620389 KDM2BQ8NHM5 1336 aa11.02□□□□□ -0.65
SRSF3-207ENST00000620389 OFD1O75665 1012 aa11.01□□□□□ -0.65
SRSF3-207ENST00000620389 BECN1Q14457 450 aa11.01□□□□□ -0.65
SRSF3-207ENST00000620389 ZNF326Q5BKZ1 582 aaKnown RBP11.01□□□□□ -0.65
SRSF3-207ENST00000620389 RSPH4AQ5TD94 716 aa11.01□□□□□ -0.65
SRSF3-207ENST00000620389 MTERF4Q7Z6M4 381 aaKnown RBP11□□□□□ -0.65
SRSF3-207ENST00000620389 CRBNQ96SW2 442 aa11□□□□□ -0.65
SRSF3-207ENST00000620389 TMEM51Q9NW97 253 aa11□□□□□ -0.65
SRSF3-207ENST00000620389 UACAQ9BZF9 1416 aa11□□□□□ -0.65
SRSF3-207ENST00000620389 KIF7Q2M1P5 1343 aa11□□□□□ -0.65
SRSF3-207ENST00000620389 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
SRSF3-207ENST00000620389 PLIN1O60240 522 aa10.99□□□□□ -0.65
SRSF3-207ENST00000620389 ZSCAN20P17040 1043 aaPredicted RBP10.99□□□□□ -0.65
SRSF3-207ENST00000620389 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.99□□□□□ -0.65
SRSF3-207ENST00000620389 CENPQQ7L2Z9 268 aaPredicted RBP10.99□□□□□ -0.65
SRSF3-207ENST00000620389 ARID3AQ99856 593 aa10.99□□□□□ -0.65
SRSF3-207ENST00000620389 ISY1Q9ULR0 285 aaKnown RBP10.99□□□□□ -0.65
SRSF3-207ENST00000620389 MCM4P33991 863 aa10.98□□□□□ -0.65
SRSF3-207ENST00000620389 TIAM1Q13009 1591 aa10.98□□□□□ -0.65
SRSF3-207ENST00000620389 KLHL34Q8N239 644 aa10.98□□□□□ -0.65
SRSF3-207ENST00000620389 USP19O94966 1318 aa10.98□□□□□ -0.65
SRSF3-207ENST00000620389 ABCA5Q8WWZ7 1642 aa10.97□□□□□ -0.65
SRSF3-207ENST00000620389 TRAK2O60296 914 aa10.97□□□□□ -0.65
SRSF3-207ENST00000620389 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
SRSF3-207ENST00000620389 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
SRSF3-207ENST00000620389 MYOM3Q5VTT5 1437 aa10.97□□□□□ -0.65
SRSF3-207ENST00000620389 CCDC18Q5T9S5 1454 aa10.97□□□□□ -0.65
SRSF3-207ENST00000620389 PRXQ9BXM0 1461 aa10.97□□□□□ -0.65
SRSF3-207ENST00000620389 LRRC9Q6ZRR7 1453 aa10.96□□□□□ -0.65
SRSF3-207ENST00000620389 TNNT2P45379 298 aaPredicted RBP10.96□□□□□ -0.65
SRSF3-207ENST00000620389 ARHGAP35Q9NRY4 1499 aa10.96□□□□□ -0.66
SRSF3-207ENST00000620389 KIF20AO95235 890 aa10.95□□□□□ -0.66
SRSF3-207ENST00000620389 ZSCAN30Q86W11 494 aa10.95□□□□□ -0.66
SRSF3-207ENST00000620389 LRPPRCP42704 1394 aaKnown RBP10.95□□□□□ -0.66
SRSF3-207ENST00000620389 ANP32BQ92688 251 aaKnown RBP10.95□□□□□ -0.66
SRSF3-207ENST00000620389 ZNF830Q96NB3 372 aaPredicted RBP10.95□□□□□ -0.66
SRSF3-207ENST00000620389 PDE3BQ13370 1112 aa10.94□□□□□ -0.66
SRSF3-207ENST00000620389 PLCD3Q8N3E9 789 aa10.94□□□□□ -0.66
SRSF3-207ENST00000620389 VGLL3A8MV65 326 aa10.94□□□□□ -0.66
SRSF3-207ENST00000620389 R3HCC1Q9Y3T6 440 aaKnown RBP10.94□□□□□ -0.66
SRSF3-207ENST00000620389 UQCRHLA0A096LP55 91 aa10.93□□□□□ -0.66
SRSF3-207ENST00000620389 UQCRHP07919 91 aa10.93□□□□□ -0.66
SRSF3-207ENST00000620389 CCDC94Q9BW85 323 aaPredicted RBP10.92□□□□□ -0.66
SRSF3-207ENST00000620389 MSNP26038 577 aaKnown RBP10.92□□□□□ -0.66
SRSF3-207ENST00000620389 DYNC1I1O14576 645 aa10.92□□□□□ -0.66
SRSF3-207ENST00000620389 GTPBP4Q9BZE4 634 aaKnown RBP10.92□□□□□ -0.66
SRSF3-207ENST00000620389 C20orf194Q5TEA3 1177 aa10.91□□□□□ -0.66
SRSF3-207ENST00000620389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.91□□□□□ -0.66
SRSF3-207ENST00000620389 UNC13AQ9UPW8 1703 aa10.91□□□□□ -0.66
SRSF3-207ENST00000620389 FTSJ3Q8IY81 847 aaKnown RBP10.91□□□□□ -0.66
SRSF3-207ENST00000620389 CDCA7LQ96GN5 454 aa10.9□□□□□ -0.66
SRSF3-207ENST00000620389 SPATA31E1Q6ZUB1 1445 aa10.9□□□□□ -0.66
SRSF3-207ENST00000620389 AQRO60306 1485 aaKnown RBP eCLIP10.9□□□□□ -0.666e-11■■■■□ 26.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms