RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 LRRIQ1Q96JM4 1722 aa21.84■■□□□ 1.09
DKC1-213ENST00000620277 CCDC136Q96JN2 1154 aa21.84■■□□□ 1.09
DKC1-213ENST00000620277 NPM2Q86SE8 214 aaKnown RBP21.83■■□□□ 1.09
DKC1-213ENST00000620277 PKD2Q13563 968 aa21.83■■□□□ 1.09
DKC1-213ENST00000620277 CFDP1Q9UEE9 299 aaPredicted RBP21.83■■□□□ 1.09
DKC1-213ENST00000620277 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
DKC1-213ENST00000620277 TMC1Q8TDI8 760 aa21.81■■□□□ 1.08
DKC1-213ENST00000620277 PAK3O75914 559 aaPredicted RBP21.8■■□□□ 1.08
DKC1-213ENST00000620277 SUPT6HQ7KZ85 1726 aaKnown RBP21.8■■□□□ 1.08
DKC1-213ENST00000620277 RGL3Q3MIN7 710 aa21.77■■□□□ 1.08
DKC1-213ENST00000620277 ZBED9Q6R2W3 1325 aa21.76■■□□□ 1.07
DKC1-213ENST00000620277 EPRSP07814 1512 aaKnown RBP21.75■■□□□ 1.07
DKC1-213ENST00000620277 CUL7Q14999 1698 aa21.75■■□□□ 1.07
DKC1-213ENST00000620277 UGGT2Q9NYU1 1516 aa21.75■■□□□ 1.07
DKC1-213ENST00000620277 CARD11Q9BXL7 1154 aa21.74■■□□□ 1.07
DKC1-213ENST00000620277 EHBP1L1Q8N3D4 1523 aa21.74■■□□□ 1.07
DKC1-213ENST00000620277 FANCIQ9NVI1 1328 aa21.74■■□□□ 1.07
DKC1-213ENST00000620277 ANKRD30BQ9BXX2 1392 aa21.74■■□□□ 1.07
DKC1-213ENST00000620277 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
DKC1-213ENST00000620277 NCOA1Q15788 1441 aa21.72■■□□□ 1.07
DKC1-213ENST00000620277 DCAF11Q8TEB1 546 aa21.71■■□□□ 1.07
DKC1-213ENST00000620277 ST20-MTHFSA0A0A6YYL1 179 aa21.7■■□□□ 1.06
DKC1-213ENST00000620277 SKAP1Q86WV1 359 aa21.7■■□□□ 1.06
DKC1-213ENST00000620277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.7■■□□□ 1.064e-7■■■□□ 15.4
DKC1-213ENST00000620277 USP47Q96K76 1375 aa21.68■■□□□ 1.06
DKC1-213ENST00000620277 PRG4Q92954 1404 aaPredicted RBP21.68■■□□□ 1.06
DKC1-213ENST00000620277 ABCC5O15440 1437 aa21.67■■□□□ 1.06
DKC1-213ENST00000620277 DAPK1P53355 1430 aa21.66■■□□□ 1.06
DKC1-213ENST00000620277 DEKP35659 375 aaKnown RBP21.66■■□□□ 1.06
DKC1-213ENST00000620277 SAMD9Q5K651 1589 aa21.65■■□□□ 1.06
DKC1-213ENST00000620277 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
DKC1-213ENST00000620277 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.06
DKC1-213ENST00000620277 NUDCQ9Y266 331 aa21.64■■□□□ 1.06
DKC1-213ENST00000620277 NOP58Q9Y2X3 529 aaKnown RBP21.64■■□□□ 1.05
DKC1-213ENST00000620277 HNRNPMP52272 730 aaKnown RBP eCLIP21.63■■□□□ 1.05
DKC1-213ENST00000620277 CC2D1BQ5T0F9 858 aaKnown RBP21.62■■□□□ 1.05
DKC1-213ENST00000620277 PLIN1O60240 522 aa21.62■■□□□ 1.05
DKC1-213ENST00000620277 NUP155O75694 1391 aa21.6■■□□□ 1.05
DKC1-213ENST00000620277 EXOC6Q8TAG9 804 aa21.6■■□□□ 1.05
DKC1-213ENST00000620277 RPRD2Q5VT52 1461 aaKnown RBP21.6■■□□□ 1.05
DKC1-213ENST00000620277 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
DKC1-213ENST00000620277 PNISRQ8TF01 805 aaKnown RBP21.57■■□□□ 1.04
DKC1-213ENST00000620277 CDCA7LQ96GN5 454 aa21.57■■□□□ 1.04
DKC1-213ENST00000620277 ABCA5Q8WWZ7 1642 aa21.57■■□□□ 1.04
DKC1-213ENST00000620277 ANP32AP39687 249 aaKnown RBP21.56■■□□□ 1.04
DKC1-213ENST00000620277 LAS1LQ9Y4W2 734 aaKnown RBP21.56■■□□□ 1.04
DKC1-213ENST00000620277 TCOF1Q13428 1488 aaKnown RBP21.55■■□□□ 1.04
DKC1-213ENST00000620277 ERICH6BQ5W0A0 696 aa21.54■■□□□ 1.04
DKC1-213ENST00000620277 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
DKC1-213ENST00000620277 MIA2Q96PC5 1412 aa21.54■■□□□ 1.04
DKC1-213ENST00000620277 IQGAP2Q13576 1575 aa21.54■■□□□ 1.04
DKC1-213ENST00000620277 TEX14Q8IWB6 1497 aa21.54■■□□□ 1.04
DKC1-213ENST00000620277 DHX29Q7Z478 1369 aaKnown RBP21.53■■□□□ 1.04
DKC1-213ENST00000620277 TSPY4P0CV99 314 aa21.53■■□□□ 1.04
DKC1-213ENST00000620277 TSPY10P0CW01 314 aa21.53■■□□□ 1.04
DKC1-213ENST00000620277 NBPF1Q3BBV0 1214 aa21.53■■□□□ 1.04
DKC1-213ENST00000620277 SPATA31E1Q6ZUB1 1445 aa21.52■■□□□ 1.04
DKC1-213ENST00000620277 ZBTB47Q9UFB7 747 aaPredicted RBP21.52■■□□□ 1.04
DKC1-213ENST00000620277 ARHGEF11O15085 1522 aa21.52■■□□□ 1.04
DKC1-213ENST00000620277 PLB1Q6P1J6 1458 aa21.51■■□□□ 1.03
DKC1-213ENST00000620277 KIF21AQ7Z4S6 1674 aa21.5■■□□□ 1.03
DKC1-213ENST00000620277 PLEKHD1A6NEE1 506 aa21.5■■□□□ 1.03
DKC1-213ENST00000620277 NUP153P49790 1475 aaKnown RBP21.47■■□□□ 1.03
DKC1-213ENST00000620277 GCC2Q8IWJ2 1684 aa21.46■■□□□ 1.03
DKC1-213ENST00000620277 PZPP20742 1482 aa21.45■■□□□ 1.02
DKC1-213ENST00000620277 RTL5Q5HYW3 569 aaPredicted RBP21.44■■□□□ 1.02
DKC1-213ENST00000620277 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
DKC1-213ENST00000620277 RTN4Q9NQC3 1192 aaKnown RBP21.44■■□□□ 1.02
DKC1-213ENST00000620277 RCAN3Q9UKA8 241 aa21.44■■□□□ 1.02
DKC1-213ENST00000620277 WDR62O43379 1518 aa21.44■■□□□ 1.02
DKC1-213ENST00000620277 SMG6Q86US8 1419 aaKnown RBP21.44■■□□□ 1.02
DKC1-213ENST00000620277 ROCK2O75116 1388 aaKnown RBP21.43■■□□□ 1.02
DKC1-213ENST00000620277 ANKRD50Q9ULJ7 1429 aa21.42■■□□□ 1.02
DKC1-213ENST00000620277 IPO9Q96P70 1041 aaKnown RBP21.42■■□□□ 1.02
DKC1-213ENST00000620277 KIAA1107Q9UPP5 1409 aa21.42■■□□□ 1.02
DKC1-213ENST00000620277 ANKRD30AQ9BXX3 1397 aa21.42■■□□□ 1.02
DKC1-213ENST00000620277 ROCK1Q13464 1354 aa21.41■■□□□ 1.02
DKC1-213ENST00000620277 CAMSAP2Q08AD1 1489 aa21.41■■□□□ 1.02
DKC1-213ENST00000620277 RRP1P56182 461 aaKnown RBP21.41■■□□□ 1.02
DKC1-213ENST00000620277 BCORL1Q5H9F3 1711 aa21.4■■□□□ 1.02
DKC1-213ENST00000620277 SLC4A3P48751 1232 aa21.4■■□□□ 1.02
DKC1-213ENST00000620277 TARBP1Q13395 1621 aaKnown RBP21.39■■□□□ 1.01
DKC1-213ENST00000620277 DISP1Q96F81 1524 aa21.37■■□□□ 1.01
DKC1-213ENST00000620277 MYBBP1AQ9BQG0 1328 aaKnown RBP21.37■■□□□ 1.01
DKC1-213ENST00000620277 PANK3Q9H999 370 aa21.35■■□□□ 1.01
DKC1-213ENST00000620277 GPATCH8Q9UKJ3 1502 aaKnown RBP21.34■■□□□ 1.01
DKC1-213ENST00000620277 KIF15Q9NS87 1388 aa21.34■■□□□ 1.01
DKC1-213ENST00000620277 C20orf194Q5TEA3 1177 aa21.33■■□□□ 1.01
DKC1-213ENST00000620277 TROQ12816 1431 aaPredicted RBP21.33■■□□□ 1.01
DKC1-213ENST00000620277 PDE4AP27815 886 aa21.32■■□□□ 1
DKC1-213ENST00000620277 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
DKC1-213ENST00000620277 CRBNQ96SW2 442 aa21.32■■□□□ 1
DKC1-213ENST00000620277 DNMT1P26358 1616 aaKnown RBP21.31■■□□□ 1
DKC1-213ENST00000620277 KIF14Q15058 1648 aa21.3■■□□□ 1
DKC1-213ENST00000620277 PBRM1Q86U86 1689 aa21.3■■□□□ 1
DKC1-213ENST00000620277 ADAMTS12P58397 1594 aa21.3■■□□□ 1
DKC1-213ENST00000620277 NEFMP07197 916 aa21.29■■□□□ 1
DKC1-213ENST00000620277 NLRP13Q86W25 1043 aa21.29■■□□□ 1
DKC1-213ENST00000620277 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
DKC1-213ENST00000620277 RALBP1Q15311 655 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms