RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
TNFAIP3-210ENST00000620204 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
TNFAIP3-210ENST00000620204 NUDCQ9Y266 331 aa12.99□□□□□ -0.33
TNFAIP3-210ENST00000620204 MTUS2Q5JR59 1369 aa12.99□□□□□ -0.33
TNFAIP3-210ENST00000620204 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
TNFAIP3-210ENST00000620204 FOXD1Q16676 465 aa12.98□□□□□ -0.33
TNFAIP3-210ENST00000620204 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
TNFAIP3-210ENST00000620204 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
TNFAIP3-210ENST00000620204 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
TNFAIP3-210ENST00000620204 ARID4BQ4LE39 1312 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP3-210ENST00000620204 ZNF777Q9ULD5 760 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-210ENST00000620204 NAP1L5Q96NT1 182 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-210ENST00000620204 FHAD1B1AJZ9 1412 aa12.95□□□□□ -0.34
TNFAIP3-210ENST00000620204 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
TNFAIP3-210ENST00000620204 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
TNFAIP3-210ENST00000620204 PHLDB1Q86UU1 1377 aa12.94□□□□□ -0.34
TNFAIP3-210ENST00000620204 DDRGK1Q96HY6 314 aa12.94□□□□□ -0.34
TNFAIP3-210ENST00000620204 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
TNFAIP3-210ENST00000620204 PLIN1O60240 522 aa12.92□□□□□ -0.34
TNFAIP3-210ENST00000620204 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
TNFAIP3-210ENST00000620204 FRAT2O75474 233 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP3-210ENST00000620204 RGS3P49796 1198 aa12.9□□□□□ -0.34
TNFAIP3-210ENST00000620204 TARBP1Q13395 1621 aaKnown RBP12.89□□□□□ -0.35
TNFAIP3-210ENST00000620204 L3MBTL2Q969R5 705 aa12.89□□□□□ -0.35
TNFAIP3-210ENST00000620204 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
TNFAIP3-210ENST00000620204 CUL7Q14999 1698 aa12.89□□□□□ -0.35
TNFAIP3-210ENST00000620204 WDR62O43379 1518 aa12.88□□□□□ -0.35
TNFAIP3-210ENST00000620204 FMN1Q68DA7 1419 aa12.87□□□□□ -0.35
TNFAIP3-210ENST00000620204 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
TNFAIP3-210ENST00000620204 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
TNFAIP3-210ENST00000620204 RCAN3Q9UKA8 241 aa12.87□□□□□ -0.35
TNFAIP3-210ENST00000620204 EIF4G3O43432 1585 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-210ENST00000620204 RRP1P56182 461 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-210ENST00000620204 SLKQ9H2G2 1235 aaPredicted RBP12.84□□□□□ -0.35
TNFAIP3-210ENST00000620204 CNTLNQ9NXG0 1405 aa12.83□□□□□ -0.36
TNFAIP3-210ENST00000620204 PCF11O94913 1555 aaKnown RBP12.83□□□□□ -0.36
TNFAIP3-210ENST00000620204 ZMYND15Q9H091 742 aa12.83□□□□□ -0.36
TNFAIP3-210ENST00000620204 PBRM1Q86U86 1689 aa12.82□□□□□ -0.36
TNFAIP3-210ENST00000620204 GZF1Q9H116 711 aaPredicted RBP12.82□□□□□ -0.36
TNFAIP3-210ENST00000620204 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
TNFAIP3-210ENST00000620204 HSP90AA2PQ14568 343 aaPredicted RBP12.81□□□□□ -0.36
TNFAIP3-210ENST00000620204 KIF7Q2M1P5 1343 aa12.81□□□□□ -0.36
TNFAIP3-210ENST00000620204 GRIN2AQ12879 1464 aa12.81□□□□□ -0.36
TNFAIP3-210ENST00000620204 DCAF11Q8TEB1 546 aa12.81□□□□□ -0.36
TNFAIP3-210ENST00000620204 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
TNFAIP3-210ENST00000620204 IQGAP2Q13576 1575 aa12.79□□□□□ -0.36
TNFAIP3-210ENST00000620204 THOC2Q8NI27 1593 aaKnown RBP12.79□□□□□ -0.36
TNFAIP3-210ENST00000620204 LRRC9Q6ZRR7 1453 aa12.79□□□□□ -0.36
TNFAIP3-210ENST00000620204 FAM43AQ8N2R8 423 aa12.79□□□□□ -0.36
TNFAIP3-210ENST00000620204 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
TNFAIP3-210ENST00000620204 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
TNFAIP3-210ENST00000620204 ADAMTS12P58397 1594 aa12.79□□□□□ -0.36
TNFAIP3-210ENST00000620204 CTTNBP2Q8WZ74 1663 aa12.78□□□□□ -0.36
TNFAIP3-210ENST00000620204 HSP90AA1P07900 732 aaKnown RBP12.78□□□□□ -0.36
TNFAIP3-210ENST00000620204 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
TNFAIP3-210ENST00000620204 CDCA7LQ96GN5 454 aa12.78□□□□□ -0.36
TNFAIP3-210ENST00000620204 CARMIL2Q6F5E8 1435 aa12.77□□□□□ -0.36
TNFAIP3-210ENST00000620204 CASKIN1Q8WXD9 1431 aa12.77□□□□□ -0.36
TNFAIP3-210ENST00000620204 MS4A1P11836 297 aa12.77□□□□□ -0.36
TNFAIP3-210ENST00000620204 CCDC18Q5T9S5 1454 aa12.77□□□□□ -0.36
TNFAIP3-210ENST00000620204 PLEKHD1A6NEE1 506 aa12.77□□□□□ -0.37
TNFAIP3-210ENST00000620204 SYNJ2O15056 1496 aa12.77□□□□□ -0.37
TNFAIP3-210ENST00000620204 POGKQ9P215 609 aa12.77□□□□□ -0.37
TNFAIP3-210ENST00000620204 TIAM1Q13009 1591 aa12.76□□□□□ -0.37
TNFAIP3-210ENST00000620204 EFCAB5A4FU69 1503 aa12.76□□□□□ -0.37
TNFAIP3-210ENST00000620204 KDM2AQ9Y2K7 1162 aa12.75□□□□□ -0.37
TNFAIP3-210ENST00000620204 CDK13Q14004 1512 aaKnown RBP12.75□□□□□ -0.37
TNFAIP3-210ENST00000620204 NBPF8Q3BBV2 869 aa12.75□□□□□ -0.37
TNFAIP3-210ENST00000620204 KIAA0586Q9BVV6 1533 aa12.75□□□□□ -0.37
TNFAIP3-210ENST00000620204 MPHOSPH9Q99550 1183 aa12.74□□□□□ -0.37
TNFAIP3-210ENST00000620204 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
TNFAIP3-210ENST00000620204 MAGI1Q96QZ7 1491 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP3-210ENST00000620204 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
TNFAIP3-210ENST00000620204 FYCO1Q9BQS8 1478 aa12.73□□□□□ -0.37
TNFAIP3-210ENST00000620204 PRG4Q92954 1404 aaPredicted RBP12.73□□□□□ -0.37
TNFAIP3-210ENST00000620204 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-210ENST00000620204 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-210ENST00000620204 RRAGDQ9NQL2 400 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-210ENST00000620204 PLB1Q6P1J6 1458 aa12.71□□□□□ -0.37
TNFAIP3-210ENST00000620204 PTPRGP23470 1445 aa12.71□□□□□ -0.38
TNFAIP3-210ENST00000620204 ARID3AQ99856 593 aa12.7□□□□□ -0.38
TNFAIP3-210ENST00000620204 UACAQ9BZF9 1416 aa12.7□□□□□ -0.38
TNFAIP3-210ENST00000620204 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
TNFAIP3-210ENST00000620204 FAM161AQ3B820 660 aa12.68□□□□□ -0.38
TNFAIP3-210ENST00000620204 CC2D1BQ5T0F9 858 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-210ENST00000620204 L1TD1Q5T7N2 865 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-210ENST00000620204 NCOA2Q15596 1464 aa12.67□□□□□ -0.38
TNFAIP3-210ENST00000620204 A0A0U1RQG5 324 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-210ENST00000620204 C20orf194Q5TEA3 1177 aa12.67□□□□□ -0.38
TNFAIP3-210ENST00000620204 RNF123Q5XPI4 1314 aa12.66□□□□□ -0.38
TNFAIP3-210ENST00000620204 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
TNFAIP3-210ENST00000620204 BECN1Q14457 450 aa12.66□□□□□ -0.38
TNFAIP3-210ENST00000620204 CEP170Q5SW79 1584 aa12.66□□□□□ -0.38
TNFAIP3-210ENST00000620204 CARD11Q9BXL7 1154 aa12.65□□□□□ -0.38
TNFAIP3-210ENST00000620204 EPRSP07814 1512 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-210ENST00000620204 GOLGA6L3A6NEY3 463 aa12.65□□□□□ -0.38
TNFAIP3-210ENST00000620204 FGD6Q6ZV73 1430 aa12.65□□□□□ -0.39
TNFAIP3-210ENST00000620204 TRIM44Q96DX7 344 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP3-210ENST00000620204 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
TNFAIP3-210ENST00000620204 DISP1Q96F81 1524 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms