RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 DIEXFQ68CQ4 756 aaKnown RBP29.38■■■□□ 2.29
MMP28-207ENST00000619655 ABCC5O15440 1437 aa29.37■■■□□ 2.29
MMP28-207ENST00000619655 CDC42BPAQ5VT25 1732 aa29.34■■■□□ 2.29
MMP28-207ENST00000619655 ABCC10Q5T3U5 1492 aa29.33■■■□□ 2.29
MMP28-207ENST00000619655 KDM6BO15054 1643 aa29.33■■■□□ 2.29
MMP28-207ENST00000619655 ABCC2Q92887 1545 aa29.32■■■□□ 2.28
MMP28-207ENST00000619655 AKNAQ7Z591 1439 aa29.32■■■□□ 2.28
MMP28-207ENST00000619655 TRIM52Q96A61 297 aa29.3■■■□□ 2.28
MMP28-207ENST00000619655 ROCK1Q13464 1354 aa29.25■■■□□ 2.27
MMP28-207ENST00000619655 KCNH8Q96L42 1107 aa29.19■■■□□ 2.26
MMP28-207ENST00000619655 CROCC2H7BZ55 1655 aa29.18■■■□□ 2.26
MMP28-207ENST00000619655 ZCCHC11Q5TAX3 1644 aaKnown RBP29.17■■■□□ 2.26
MMP28-207ENST00000619655 ADGBQ8N7X0 1667 aa29.16■■■□□ 2.26
MMP28-207ENST00000619655 TTC37Q6PGP7 1564 aa29.15■■■□□ 2.26
MMP28-207ENST00000619655 CDC42BPBQ9Y5S2 1711 aa29.14■■■□□ 2.26
MMP28-207ENST00000619655 PREX2Q70Z35 1606 aa29.13■■■□□ 2.25
MMP28-207ENST00000619655 HNRNPMP52272 730 aaKnown RBP eCLIP29.12■■■□□ 2.25
MMP28-207ENST00000619655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.12■■■□□ 2.25
MMP28-207ENST00000619655 NCOA1Q15788 1441 aa29.12■■■□□ 2.25
MMP28-207ENST00000619655 UHRF1BP1LA0JNW5 1464 aa29.12■■■□□ 2.25
MMP28-207ENST00000619655 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
MMP28-207ENST00000619655 MPHOSPH9Q99550 1183 aa29.1■■■□□ 2.25
MMP28-207ENST00000619655 DENND4BO75064 1496 aaPredicted RBP29.09■■■□□ 2.25
MMP28-207ENST00000619655 TONSLQ96HA7 1378 aa29.09■■■□□ 2.25
MMP28-207ENST00000619655 KDM5BQ9UGL1 1544 aa29.09■■■□□ 2.25
MMP28-207ENST00000619655 SAMD9LQ8IVG5 1584 aa29.08■■■□□ 2.25
MMP28-207ENST00000619655 ARHGAP5Q13017 1502 aa29.08■■■□□ 2.25
MMP28-207ENST00000619655 ANKRD30AQ9BXX3 1397 aa29.08■■■□□ 2.25
MMP28-207ENST00000619655 TIMELESSQ9UNS1 1208 aa29.08■■■□□ 2.25
MMP28-207ENST00000619655 FOXD1Q16676 465 aa29.06■■■□□ 2.24
MMP28-207ENST00000619655 ADGRL2O95490 1459 aa29.06■■■□□ 2.24
MMP28-207ENST00000619655 C9orf84Q5VXU9 1444 aa29.06■■■□□ 2.24
MMP28-207ENST00000619655 TSPY4P0CV99 314 aa29.06■■■□□ 2.24
MMP28-207ENST00000619655 TSPY10P0CW01 314 aa29.06■■■□□ 2.24
MMP28-207ENST00000619655 MYO5CQ9NQX4 1742 aa29.03■■■□□ 2.24
MMP28-207ENST00000619655 SHANK2Q9UPX8 1470 aa29.01■■■□□ 2.23
MMP28-207ENST00000619655 MBD5Q9P267 1494 aa29■■■□□ 2.23
MMP28-207ENST00000619655 PPP1R15AO75807 674 aaPredicted RBP29■■■□□ 2.23
MMP28-207ENST00000619655 SLC4A1APQ9BWU0 796 aaKnown RBP28.99■■■□□ 2.23
MMP28-207ENST00000619655 ARHGEF5Q12774 1597 aa28.99■■■□□ 2.23
MMP28-207ENST00000619655 SYCP2Q9BX26 1530 aa28.98■■■□□ 2.23
MMP28-207ENST00000619655 CCDC141Q6ZP82 1450 aa28.97■■■□□ 2.23
MMP28-207ENST00000619655 ANKRD50Q9ULJ7 1429 aa28.96■■■□□ 2.23
MMP28-207ENST00000619655 ACIN1Q9UKV3 1341 aaKnown RBP28.95■■■□□ 2.23
MMP28-207ENST00000619655 KIF15Q9NS87 1388 aa28.91■■■□□ 2.22
MMP28-207ENST00000619655 PZPP20742 1482 aa28.89■■■□□ 2.21
MMP28-207ENST00000619655 PLCH2O75038 1416 aa28.89■■■□□ 2.21
MMP28-207ENST00000619655 RSPH4AQ5TD94 716 aa28.88■■■□□ 2.21
MMP28-207ENST00000619655 WDR7Q9Y4E6 1490 aa28.87■■■□□ 2.21
MMP28-207ENST00000619655 MIER1Q8N108 512 aa28.87■■■□□ 2.21
MMP28-207ENST00000619655 EFCAB2Q5VUJ9 269 aa28.85■■■□□ 2.21
MMP28-207ENST00000619655 ANKRD30BQ9BXX2 1392 aa28.84■■■□□ 2.21
MMP28-207ENST00000619655 PLEKHH2Q8IVE3 1493 aa28.83■■■□□ 2.21
MMP28-207ENST00000619655 HIRIP3Q9BW71 556 aaPredicted RBP28.82■■■□□ 2.2
MMP28-207ENST00000619655 ARHGEF12Q9NZN5 1544 aa28.82■■■□□ 2.2
MMP28-207ENST00000619655 NUP155O75694 1391 aa28.81■■■□□ 2.2
MMP28-207ENST00000619655 KIAA1107Q9UPP5 1409 aa28.81■■■□□ 2.2
MMP28-207ENST00000619655 PKD2Q13563 968 aa28.79■■■□□ 2.2
MMP28-207ENST00000619655 ASXL2Q76L83 1435 aa28.78■■■□□ 2.2
MMP28-207ENST00000619655 NPM1P06748 294 aaKnown RBP eCLIP28.76■■■□□ 2.2
MMP28-207ENST00000619655 L3MBTL2Q969R5 705 aa28.75■■■□□ 2.19
MMP28-207ENST00000619655 RPRD2Q5VT52 1461 aaKnown RBP28.75■■■□□ 2.19
MMP28-207ENST00000619655 ABCC1P33527 1531 aa28.75■■■□□ 2.19
MMP28-207ENST00000619655 MAST1Q9Y2H9 1570 aa28.74■■■□□ 2.19
MMP28-207ENST00000619655 TRAPPC8Q9Y2L5 1435 aa28.7■■■□□ 2.19
MMP28-207ENST00000619655 ABCA9Q8IUA7 1624 aa28.69■■■□□ 2.18
MMP28-207ENST00000619655 FANCAO15360 1455 aa28.67■■■□□ 2.18
MMP28-207ENST00000619655 PLXNC1O60486 1568 aa28.67■■■□□ 2.18
MMP28-207ENST00000619655 ARAP3Q8WWN8 1544 aa28.66■■■□□ 2.18
MMP28-207ENST00000619655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.66■■■□□ 2.18
MMP28-207ENST00000619655 KDM5DQ9BY66 1539 aa28.66■■■□□ 2.18
MMP28-207ENST00000619655 AFAP1Q8N556 730 aa28.65■■■□□ 2.18
MMP28-207ENST00000619655 TEX14Q8IWB6 1497 aa28.63■■■□□ 2.17
MMP28-207ENST00000619655 YTHDC1Q96MU7 727 aaKnown RBP28.61■■■□□ 2.17
MMP28-207ENST00000619655 SPAG9O60271 1321 aaKnown RBP28.61■■■□□ 2.17
MMP28-207ENST00000619655 FAM135AQ9P2D6 1515 aa28.61■■■□□ 2.17
MMP28-207ENST00000619655 DDX10Q13206 875 aaKnown RBP28.6■■■□□ 2.17
MMP28-207ENST00000619655 DUOX2Q9NRD8 1548 aa28.6■■■□□ 2.17
MMP28-207ENST00000619655 ADGRL1O94910 1474 aa28.56■■■□□ 2.16
MMP28-207ENST00000619655 MYT1LQ9UL68 1186 aa28.56■■■□□ 2.16
MMP28-207ENST00000619655 UNC13BO14795 1591 aa28.55■■■□□ 2.16
MMP28-207ENST00000619655 NBPF8Q3BBV2 869 aa28.54■■■□□ 2.16
MMP28-207ENST00000619655 SCAPERQ9BY12 1400 aa28.53■■■□□ 2.16
MMP28-207ENST00000619655 ERBINQ96RT1 1412 aa28.53■■■□□ 2.16
MMP28-207ENST00000619655 ZFYVE16Q7Z3T8 1539 aa28.52■■■□□ 2.16
MMP28-207ENST00000619655 CYB5RLQ6IPT4 315 aa28.51■■■□□ 2.15
MMP28-207ENST00000619655 ZNF326Q5BKZ1 582 aaKnown RBP28.5■■■□□ 2.15
MMP28-207ENST00000619655 HSPA5P11021 654 aaKnown RBP28.49■■■□□ 2.15
MMP28-207ENST00000619655 RTEL1-TNFRSF6BF6WH68 1400 aa28.47■■■□□ 2.15
MMP28-207ENST00000619655 CD109Q6YHK3 1445 aa28.47■■■□□ 2.15
MMP28-207ENST00000619655 EIF4G2P78344 907 aaKnown RBP eCLIP28.46■■■□□ 2.15
MMP28-207ENST00000619655 ATP7AQ04656 1500 aa28.46■■■□□ 2.15
MMP28-207ENST00000619655 IQGAP3Q86VI3 1631 aa28.45■■■□□ 2.15
MMP28-207ENST00000619655 CENPBP07199 599 aaPredicted RBP28.44■■■□□ 2.14
MMP28-207ENST00000619655 INO80Q9ULG1 1556 aaPredicted RBP28.43■■■□□ 2.14
MMP28-207ENST00000619655 MAGI2Q86UL8 1455 aa28.4■■■□□ 2.14
MMP28-207ENST00000619655 RIMBP3CA6NJZ7 1639 aa28.39■■■□□ 2.14
MMP28-207ENST00000619655 RIMBP3BA6NNM3 1639 aa28.39■■■□□ 2.14
MMP28-207ENST00000619655 RIMBP3Q9UFD9 1639 aa28.39■■■□□ 2.14
MMP28-207ENST00000619655 CCDC144AA2RUR9 1427 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms