RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
CYFIP1-211ENST00000619348 GSE1Q14687 1217 aa17.44■□□□□ 0.38
CYFIP1-211ENST00000619348 TDRD9Q8NDG6 1382 aaKnown RBP17.44■□□□□ 0.38
CYFIP1-211ENST00000619348 PKD2Q13563 968 aa17.44■□□□□ 0.38
CYFIP1-211ENST00000619348 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
CYFIP1-211ENST00000619348 FGD5Q6ZNL6 1462 aa17.43■□□□□ 0.38
CYFIP1-211ENST00000619348 ZNF644Q9H582 1327 aaPredicted RBP17.43■□□□□ 0.38
CYFIP1-211ENST00000619348 PNISRQ8TF01 805 aaKnown RBP17.42■□□□□ 0.38
CYFIP1-211ENST00000619348 CRBNQ96SW2 442 aa17.42■□□□□ 0.38
CYFIP1-211ENST00000619348 CFTRP13569 1480 aa17.42■□□□□ 0.38
CYFIP1-211ENST00000619348 ST20-MTHFSA0A0A6YYL1 179 aa17.42■□□□□ 0.38
CYFIP1-211ENST00000619348 NFKBIBQ15653 356 aa17.42■□□□□ 0.38
CYFIP1-211ENST00000619348 DCAF11Q8TEB1 546 aa17.42■□□□□ 0.38
CYFIP1-211ENST00000619348 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
CYFIP1-211ENST00000619348 BACH2Q9BYV9 841 aa17.41■□□□□ 0.38
CYFIP1-211ENST00000619348 RAD54L2Q9Y4B4 1467 aa17.41■□□□□ 0.38
CYFIP1-211ENST00000619348 NCOA2Q15596 1464 aa17.4■□□□□ 0.38
CYFIP1-211ENST00000619348 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
CYFIP1-211ENST00000619348 USP47Q96K76 1375 aa17.4■□□□□ 0.38
CYFIP1-211ENST00000619348 MYOM3Q5VTT5 1437 aa17.4■□□□□ 0.38
CYFIP1-211ENST00000619348 USP35Q9P2H5 1018 aa17.4■□□□□ 0.38
CYFIP1-211ENST00000619348 CASKIN1Q8WXD9 1431 aa17.39■□□□□ 0.37
CYFIP1-211ENST00000619348 CANXP27824 592 aaKnown RBP17.38■□□□□ 0.37
CYFIP1-211ENST00000619348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.37
CYFIP1-211ENST00000619348 SLKQ9H2G2 1235 aaPredicted RBP17.36■□□□□ 0.37
CYFIP1-211ENST00000619348 NCOA1Q15788 1441 aa17.36■□□□□ 0.37
CYFIP1-211ENST00000619348 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
CYFIP1-211ENST00000619348 CFDP1Q9UEE9 299 aaPredicted RBP17.35■□□□□ 0.37
CYFIP1-211ENST00000619348 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
CYFIP1-211ENST00000619348 FRAT2O75474 233 aaPredicted RBP17.34■□□□□ 0.37
CYFIP1-211ENST00000619348 FBLN2P98095 1184 aa17.34■□□□□ 0.37
CYFIP1-211ENST00000619348 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
CYFIP1-211ENST00000619348 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.37
CYFIP1-211ENST00000619348 MAP3K1Q13233 1512 aa17.33■□□□□ 0.36
CYFIP1-211ENST00000619348 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.36
CYFIP1-211ENST00000619348 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
CYFIP1-211ENST00000619348 PTPN23Q9H3S7 1636 aa17.31■□□□□ 0.36
CYFIP1-211ENST00000619348 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
CYFIP1-211ENST00000619348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.29■□□□□ 0.36
CYFIP1-211ENST00000619348 NLRP13Q86W25 1043 aa17.29■□□□□ 0.36
CYFIP1-211ENST00000619348 MS4A1P11836 297 aa17.29■□□□□ 0.36
CYFIP1-211ENST00000619348 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
CYFIP1-211ENST00000619348 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
CYFIP1-211ENST00000619348 RALBP1Q15311 655 aa17.27■□□□□ 0.36
CYFIP1-211ENST00000619348 ARID4BQ4LE39 1312 aaPredicted RBP17.26■□□□□ 0.35
CYFIP1-211ENST00000619348 KIF15Q9NS87 1388 aa17.26■□□□□ 0.35
CYFIP1-211ENST00000619348 KTN1Q86UP2 1357 aaKnown RBP17.25■□□□□ 0.35
CYFIP1-211ENST00000619348 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.24■□□□□ 0.35
CYFIP1-211ENST00000619348 NAP1L5Q96NT1 182 aaPredicted RBP17.24■□□□□ 0.35
CYFIP1-211ENST00000619348 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
CYFIP1-211ENST00000619348 TSPY4P0CV99 314 aa17.22■□□□□ 0.35
CYFIP1-211ENST00000619348 TSPY10P0CW01 314 aa17.22■□□□□ 0.35
CYFIP1-211ENST00000619348 CCDC146Q8IYE0 955 aa17.22■□□□□ 0.35
CYFIP1-211ENST00000619348 ANKRD30BQ9BXX2 1392 aa17.21■□□□□ 0.35
CYFIP1-211ENST00000619348 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
CYFIP1-211ENST00000619348 FAM161AQ3B820 660 aa17.21■□□□□ 0.35
CYFIP1-211ENST00000619348 NUP155O75694 1391 aa17.21■□□□□ 0.34
CYFIP1-211ENST00000619348 ROCK2O75116 1388 aaKnown RBP17.2■□□□□ 0.34
CYFIP1-211ENST00000619348 PDE3BQ13370 1112 aa17.2■□□□□ 0.34
CYFIP1-211ENST00000619348 PANK3Q9H999 370 aa17.18■□□□□ 0.34
CYFIP1-211ENST00000619348 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
CYFIP1-211ENST00000619348 RNF123Q5XPI4 1314 aa17.18■□□□□ 0.34
CYFIP1-211ENST00000619348 DHX29Q7Z478 1369 aaKnown RBP17.17■□□□□ 0.34
CYFIP1-211ENST00000619348 BECN1Q14457 450 aa17.16■□□□□ 0.34
CYFIP1-211ENST00000619348 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
CYFIP1-211ENST00000619348 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
CYFIP1-211ENST00000619348 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
CYFIP1-211ENST00000619348 CENPQQ7L2Z9 268 aaPredicted RBP17.14■□□□□ 0.33
CYFIP1-211ENST00000619348 POGKQ9P215 609 aa17.14■□□□□ 0.33
CYFIP1-211ENST00000619348 BRD4O60885 1362 aaPredicted RBP17.14■□□□□ 0.33
CYFIP1-211ENST00000619348 NBPF1Q3BBV0 1214 aa17.13■□□□□ 0.33
CYFIP1-211ENST00000619348 TNNT2P45379 298 aaPredicted RBP17.12■□□□□ 0.33
CYFIP1-211ENST00000619348 WASHC2CQ9Y4E1 1318 aa17.12■□□□□ 0.33
CYFIP1-211ENST00000619348 RPRD2Q5VT52 1461 aaKnown RBP17.11■□□□□ 0.33
CYFIP1-211ENST00000619348 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
CYFIP1-211ENST00000619348 CFAP43Q8NDM7 1665 aa17.1■□□□□ 0.33
CYFIP1-211ENST00000619348 GLIPR1L2Q4G1C9 344 aa17.1■□□□□ 0.33
CYFIP1-211ENST00000619348 RSPH6AQ9H0K4 717 aa17.09■□□□□ 0.33
CYFIP1-211ENST00000619348 EFCAB5A4FU69 1503 aa17.08■□□□□ 0.33
CYFIP1-211ENST00000619348 CDK13Q14004 1512 aaKnown RBP17.08■□□□□ 0.32
CYFIP1-211ENST00000619348 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.32
CYFIP1-211ENST00000619348 KDM5BQ9UGL1 1544 aa17.07■□□□□ 0.32
CYFIP1-211ENST00000619348 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
CYFIP1-211ENST00000619348 VSIG10Q8N0Z9 540 aa17.06■□□□□ 0.32
CYFIP1-211ENST00000619348 BCL2L13Q9BXK5 485 aa17.06■□□□□ 0.32
CYFIP1-211ENST00000619348 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
CYFIP1-211ENST00000619348 BCAR3O75815 825 aa17.06■□□□□ 0.32
CYFIP1-211ENST00000619348 TMF1P82094 1093 aa17.06■□□□□ 0.32
CYFIP1-211ENST00000619348 HNRNPMP52272 730 aaKnown RBP eCLIP17.05■□□□□ 0.32
CYFIP1-211ENST00000619348 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
CYFIP1-211ENST00000619348 KDM6BO15054 1643 aa17.05■□□□□ 0.32
CYFIP1-211ENST00000619348 APAF1O14727 1248 aa17.05■□□□□ 0.32
CYFIP1-211ENST00000619348 SUPT6HQ7KZ85 1726 aaKnown RBP17.05■□□□□ 0.32
CYFIP1-211ENST00000619348 UBE2Q2Q8WVN8 375 aa17.05■□□□□ 0.32
CYFIP1-211ENST00000619348 HSP90AA1P07900 732 aaKnown RBP17.04■□□□□ 0.32
CYFIP1-211ENST00000619348 MIA2Q96PC5 1412 aa17.03■□□□□ 0.32
CYFIP1-211ENST00000619348 EHBP1L1Q8N3D4 1523 aa17.03■□□□□ 0.32
CYFIP1-211ENST00000619348 SPATA31E1Q6ZUB1 1445 aa17.03■□□□□ 0.32
CYFIP1-211ENST00000619348 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
CYFIP1-211ENST00000619348 PLEKHD1A6NEE1 506 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1225.7 ms