RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 MYO5CQ9NQX4 1742 aa9.96□□□□□ -0.81
CBWD3-215ENST00000619322 PCF11O94913 1555 aaKnown RBP9.96□□□□□ -0.82
CBWD3-215ENST00000619322 AGLP35573 1532 aa9.96□□□□□ -0.82
CBWD3-215ENST00000619322 ITSN2Q9NZM3 1697 aa9.95□□□□□ -0.82
CBWD3-215ENST00000619322 HECW1Q76N89 1606 aa9.95□□□□□ -0.82
CBWD3-215ENST00000619322 PREX2Q70Z35 1606 aa9.94□□□□□ -0.82
CBWD3-215ENST00000619322 LRRIQ1Q96JM4 1722 aa9.93□□□□□ -0.82
CBWD3-215ENST00000619322 PREX1Q8TCU6 1659 aa9.91□□□□□ -0.82
CBWD3-215ENST00000619322 FHOD3Q2V2M9 1422 aa9.9□□□□□ -0.82
CBWD3-215ENST00000619322 ARHGEF12Q9NZN5 1544 aa9.88□□□□□ -0.83
CBWD3-215ENST00000619322 ZC3H13Q5T200 1668 aaKnown RBP9.88□□□□□ -0.83
CBWD3-215ENST00000619322 PLXNC1O60486 1568 aa9.88□□□□□ -0.83
CBWD3-215ENST00000619322 CARMIL1Q5VZK9 1371 aa9.87□□□□□ -0.83
CBWD3-215ENST00000619322 MAST1Q9Y2H9 1570 aa9.87□□□□□ -0.83
CBWD3-215ENST00000619322 MAP3K1Q13233 1512 aa9.87□□□□□ -0.83
CBWD3-215ENST00000619322 ADGBQ8N7X0 1667 aa9.86□□□□□ -0.83
CBWD3-215ENST00000619322 ASXL2Q76L83 1435 aa9.86□□□□□ -0.83
CBWD3-215ENST00000619322 EIF2AK4Q9P2K8 1649 aaKnown RBP9.86□□□□□ -0.83
CBWD3-215ENST00000619322 APLP2Q06481 763 aa9.85□□□□□ -0.83
CBWD3-215ENST00000619322 INO80Q9ULG1 1556 aaPredicted RBP9.84□□□□□ -0.83
CBWD3-215ENST00000619322 CHMP7Q8WUX9 453 aaPredicted RBP9.84□□□□□ -0.83
CBWD3-215ENST00000619322 LMTK3Q96Q04 1460 aa9.84□□□□□ -0.83
CBWD3-215ENST00000619322 CCDC18Q5T9S5 1454 aa9.82□□□□□ -0.84
CBWD3-215ENST00000619322 CAMSAP2Q08AD1 1489 aa9.81□□□□□ -0.84
CBWD3-215ENST00000619322 CDC42BPBQ9Y5S2 1711 aa9.81□□□□□ -0.84
CBWD3-215ENST00000619322 HECW2Q9P2P5 1572 aa9.81□□□□□ -0.84
CBWD3-215ENST00000619322 FKBP8Q14318 412 aa9.81□□□□□ -0.84
CBWD3-215ENST00000619322 CDC42BPAQ5VT25 1732 aa9.8□□□□□ -0.84
CBWD3-215ENST00000619322 RNF17Q9BXT8 1623 aaKnown RBP9.79□□□□□ -0.84
CBWD3-215ENST00000619322 PTPRGP23470 1445 aa9.79□□□□□ -0.84
CBWD3-215ENST00000619322 KIF14Q15058 1648 aa9.79□□□□□ -0.84
CBWD3-215ENST00000619322 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.78□□□□□ -0.84
CBWD3-215ENST00000619322 NUP153P49790 1475 aaKnown RBP9.77□□□□□ -0.84
CBWD3-215ENST00000619322 JPH4Q96JJ6 628 aa9.77□□□□□ -0.85
CBWD3-215ENST00000619322 SIGLEC1Q9BZZ2 1709 aa9.77□□□□□ -0.85
CBWD3-215ENST00000619322 ABCC1P33527 1531 aa9.77□□□□□ -0.85
CBWD3-215ENST00000619322 ARHGEF5Q12774 1597 aa9.76□□□□□ -0.85
CBWD3-215ENST00000619322 CROCC2H7BZ55 1655 aa9.76□□□□□ -0.85
CBWD3-215ENST00000619322 PTPN23Q9H3S7 1636 aa9.76□□□□□ -0.85
CBWD3-215ENST00000619322 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
CBWD3-215ENST00000619322 FYCO1Q9BQS8 1478 aa9.75□□□□□ -0.85
CBWD3-215ENST00000619322 ATP10BO94823 1461 aa9.75□□□□□ -0.85
CBWD3-215ENST00000619322 MLH3Q9UHC1 1453 aa9.75□□□□□ -0.85
CBWD3-215ENST00000619322 TSPOAP1O95153 1857 aa9.74□□□□□ -0.85
CBWD3-215ENST00000619322 DEPDC5O75140 1603 aa9.74□□□□□ -0.85
CBWD3-215ENST00000619322 ADGRL1O94910 1474 aa9.74□□□□□ -0.85
CBWD3-215ENST00000619322 DIP2CQ9Y2E4 1556 aa9.73□□□□□ -0.85
CBWD3-215ENST00000619322 ZFYVE16Q7Z3T8 1539 aa9.72□□□□□ -0.85
CBWD3-215ENST00000619322 POLR1AO95602 1720 aaPredicted RBP9.7□□□□□ -0.86
CBWD3-215ENST00000619322 FANCAO15360 1455 aa9.7□□□□□ -0.86
CBWD3-215ENST00000619322 KIDINS220Q9ULH0 1771 aa9.69□□□□□ -0.86
CBWD3-215ENST00000619322 PLEKHH2Q8IVE3 1493 aa9.69□□□□□ -0.86
CBWD3-215ENST00000619322 SYNMO15061 1565 aa9.69□□□□□ -0.86
CBWD3-215ENST00000619322 ABCA6Q8N139 1617 aa9.68□□□□□ -0.86
CBWD3-215ENST00000619322 POGZQ7Z3K3 1410 aa9.68□□□□□ -0.86
CBWD3-215ENST00000619322 NPATQ14207 1427 aa9.68□□□□□ -0.86
CBWD3-215ENST00000619322 C3P01024 1663 aa9.68□□□□□ -0.86
CBWD3-215ENST00000619322 FMN1Q68DA7 1419 aa9.68□□□□□ -0.86
CBWD3-215ENST00000619322 MADDQ8WXG6 1647 aa9.67□□□□□ -0.86
CBWD3-215ENST00000619322 KIAA1107Q9UPP5 1409 aa9.66□□□□□ -0.86
CBWD3-215ENST00000619322 STRCQ7RTU9 1775 aa9.66□□□□□ -0.86
CBWD3-215ENST00000619322 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
CBWD3-215ENST00000619322 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.86
CBWD3-215ENST00000619322 PLA2R1Q13018 1463 aa9.65□□□□□ -0.86
CBWD3-215ENST00000619322 SPDYE4A6NLX3 237 aa9.65□□□□□ -0.86
CBWD3-215ENST00000619322 PLCH2O75038 1416 aa9.65□□□□□ -0.86
CBWD3-215ENST00000619322 FBLN2P98095 1184 aa9.65□□□□□ -0.86
CBWD3-215ENST00000619322 EHBP1L1Q8N3D4 1523 aa9.64□□□□□ -0.87
CBWD3-215ENST00000619322 NCOA2Q15596 1464 aa9.64□□□□□ -0.87
CBWD3-215ENST00000619322 C9orf84Q5VXU9 1444 aa9.63□□□□□ -0.87
CBWD3-215ENST00000619322 CNTLNQ9NXG0 1405 aa9.63□□□□□ -0.87
CBWD3-215ENST00000619322 RTEL1-TNFRSF6BF6WH68 1400 aa9.62□□□□□ -0.87
CBWD3-215ENST00000619322 RIMS1Q86UR5 1692 aaKnown RBP9.62□□□□□ -0.87
CBWD3-215ENST00000619322 ZNF518AQ6AHZ1 1483 aa9.62□□□□□ -0.87
CBWD3-215ENST00000619322 PTPRTO14522 1441 aa9.62□□□□□ -0.87
CBWD3-215ENST00000619322 MYO3AQ8NEV4 1616 aa9.62□□□□□ -0.87
CBWD3-215ENST00000619322 CD109Q6YHK3 1445 aa9.6□□□□□ -0.87
CBWD3-215ENST00000619322 VWDEQ8N2E2 1590 aa9.6□□□□□ -0.87
CBWD3-215ENST00000619322 SHANK2Q9UPX8 1470 aa9.6□□□□□ -0.87
CBWD3-215ENST00000619322 LMTK2Q8IWU2 1503 aa9.6□□□□□ -0.87
CBWD3-215ENST00000619322 SAMD9LQ8IVG5 1584 aa9.59□□□□□ -0.87
CBWD3-215ENST00000619322 NEURL4Q96JN8 1562 aa9.59□□□□□ -0.87
CBWD3-215ENST00000619322 DENND4BO75064 1496 aaPredicted RBP9.58□□□□□ -0.88
CBWD3-215ENST00000619322 TROQ12816 1431 aaPredicted RBP9.58□□□□□ -0.88
CBWD3-215ENST00000619322 AKNAQ7Z591 1439 aa9.58□□□□□ -0.88
CBWD3-215ENST00000619322 CYB5RLQ6IPT4 315 aa9.58□□□□□ -0.88
CBWD3-215ENST00000619322 SETD1BQ9UPS6 1966 aaKnown RBP9.58□□□□□ -0.88
CBWD3-215ENST00000619322 ZNF692Q9BU19 519 aaPredicted RBP9.57□□□□□ -0.88
CBWD3-215ENST00000619322 ATP10AO60312 1499 aa9.57□□□□□ -0.88
CBWD3-215ENST00000619322 PTPRMP28827 1452 aa9.57□□□□□ -0.88
CBWD3-215ENST00000619322 ARHGAP35Q9NRY4 1499 aa9.57□□□□□ -0.88
CBWD3-215ENST00000619322 LAMC1P11047 1609 aa9.56□□□□□ -0.88
CBWD3-215ENST00000619322 SUPT6HQ7KZ85 1726 aaKnown RBP9.56□□□□□ -0.88
CBWD3-215ENST00000619322 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
CBWD3-215ENST00000619322 TIAM1Q13009 1591 aa9.55□□□□□ -0.88
CBWD3-215ENST00000619322 NWD1Q149M9 1564 aa9.54□□□□□ -0.88
CBWD3-215ENST00000619322 ZBTB12Q9Y330 459 aaPredicted RBP9.54□□□□□ -0.88
CBWD3-215ENST00000619322 PRDM15P57071 1507 aaPredicted RBP9.53□□□□□ -0.88
CBWD3-215ENST00000619322 SPATA31D1Q6ZQQ2 1576 aa9.53□□□□□ -0.88
CBWD3-215ENST00000619322 CEP162Q5TB80 1403 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms