RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-223ENST00000619193 CTTNBP2Q8WZ74 1663 aa8.73□□□□□ -1.01
RDM1-223ENST00000619193 FOXD4L1Q9NU39 408 aa8.73□□□□□ -1.01
RDM1-223ENST00000619193 SAMD9Q5K651 1589 aa8.73□□□□□ -1.01
RDM1-223ENST00000619193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.73□□□□□ -1.01
RDM1-223ENST00000619193 CASKIN1Q8WXD9 1431 aa8.72□□□□□ -1.01
RDM1-223ENST00000619193 SETD5Q9C0A6 1442 aa8.72□□□□□ -1.01
RDM1-223ENST00000619193 FYCO1Q9BQS8 1478 aa8.72□□□□□ -1.01
RDM1-223ENST00000619193 PTPRMP28827 1452 aa8.71□□□□□ -1.01
RDM1-223ENST00000619193 FHAD1B1AJZ9 1412 aa8.71□□□□□ -1.02
RDM1-223ENST00000619193 HSPA2P54652 639 aa8.7□□□□□ -1.02
RDM1-223ENST00000619193 KDM5BQ9UGL1 1544 aa8.7□□□□□ -1.02
RDM1-223ENST00000619193 YTHDC1Q96MU7 727 aaKnown RBP8.69□□□□□ -1.02
RDM1-223ENST00000619193 FHOD3Q2V2M9 1422 aa8.69□□□□□ -1.02
RDM1-223ENST00000619193 GLI2P10070 1586 aa8.69□□□□□ -1.02
RDM1-223ENST00000619193 ZBTB22O15209 634 aa8.68□□□□□ -1.02
RDM1-223ENST00000619193 MYCNP04198 464 aaPredicted RBP8.68□□□□□ -1.02
RDM1-223ENST00000619193 MAP3K4Q9Y6R4 1608 aa8.68□□□□□ -1.02
RDM1-223ENST00000619193 ADAMTSL3P82987 1691 aa8.68□□□□□ -1.02
RDM1-223ENST00000619193 PTPRKQ15262 1439 aa8.67□□□□□ -1.02
RDM1-223ENST00000619193 ASXL2Q76L83 1435 aa8.66□□□□□ -1.02
RDM1-223ENST00000619193 JPH4Q96JJ6 628 aa8.65□□□□□ -1.02
RDM1-223ENST00000619193 FGD6Q6ZV73 1430 aa8.64□□□□□ -1.03
RDM1-223ENST00000619193 MADDQ8WXG6 1647 aa8.64□□□□□ -1.03
RDM1-223ENST00000619193 PTPN23Q9H3S7 1636 aa8.64□□□□□ -1.03
RDM1-223ENST00000619193 MAGI3Q5TCQ9 1506 aa8.64□□□□□ -1.03
RDM1-223ENST00000619193 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
RDM1-223ENST00000619193 ABCC2Q92887 1545 aa8.63□□□□□ -1.03
RDM1-223ENST00000619193 DENND4BO75064 1496 aaPredicted RBP8.63□□□□□ -1.03
RDM1-223ENST00000619193 PPP1R15AO75807 674 aaPredicted RBP8.62□□□□□ -1.03
RDM1-223ENST00000619193 SPINK5Q9NQ38 1064 aaPredicted RBP8.62□□□□□ -1.03
RDM1-223ENST00000619193 UGGT2Q9NYU1 1516 aa8.62□□□□□ -1.03
RDM1-223ENST00000619193 KCNH8Q96L42 1107 aa8.61□□□□□ -1.03
RDM1-223ENST00000619193 SIN3AQ96ST3 1273 aa8.61□□□□□ -1.03
RDM1-223ENST00000619193 SUPT16HQ9Y5B9 1047 aaKnown RBP8.61□□□□□ -1.03
RDM1-223ENST00000619193 TCOF1Q13428 1488 aaKnown RBP8.61□□□□□ -1.03
RDM1-223ENST00000619193 HFM1A2PYH4 1435 aa8.61□□□□□ -1.03
RDM1-223ENST00000619193 EPRSP07814 1512 aaKnown RBP8.6□□□□□ -1.03
RDM1-223ENST00000619193 TEX14Q8IWB6 1497 aa8.6□□□□□ -1.03
RDM1-223ENST00000619193 FMN1Q68DA7 1419 aa8.6□□□□□ -1.03
RDM1-223ENST00000619193 EHBP1L1Q8N3D4 1523 aa8.59□□□□□ -1.03
RDM1-223ENST00000619193 NCOA2Q15596 1464 aa8.59□□□□□ -1.03
RDM1-223ENST00000619193 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
RDM1-223ENST00000619193 NAIPQ13075 1403 aa8.59□□□□□ -1.03
RDM1-223ENST00000619193 RIMS1Q86UR5 1692 aaKnown RBP8.59□□□□□ -1.03
RDM1-223ENST00000619193 GCC2Q8IWJ2 1684 aa8.59□□□□□ -1.03
RDM1-223ENST00000619193 CCDC18Q5T9S5 1454 aa8.58□□□□□ -1.04
RDM1-223ENST00000619193 PLB1Q6P1J6 1458 aa8.58□□□□□ -1.04
RDM1-223ENST00000619193 UACAQ9BZF9 1416 aa8.58□□□□□ -1.04
RDM1-223ENST00000619193 CAPN15O75808 1086 aa8.58□□□□□ -1.04
RDM1-223ENST00000619193 BCORL1Q5H9F3 1711 aa8.57□□□□□ -1.04
RDM1-223ENST00000619193 MED1Q15648 1581 aaPredicted RBP8.57□□□□□ -1.04
RDM1-223ENST00000619193 MYOM3Q5VTT5 1437 aa8.57□□□□□ -1.04
RDM1-223ENST00000619193 ITGAEP38570 1179 aa8.57□□□□□ -1.04
RDM1-223ENST00000619193 HECW1Q76N89 1606 aa8.57□□□□□ -1.04
RDM1-223ENST00000619193 SUPT6HQ7KZ85 1726 aaKnown RBP8.57□□□□□ -1.04
RDM1-223ENST00000619193 AKNAQ7Z591 1439 aa8.56□□□□□ -1.04
RDM1-223ENST00000619193 P3H3Q8IVL6 736 aa8.56□□□□□ -1.04
RDM1-223ENST00000619193 FAM50AQ14320 339 aaKnown RBP8.53□□□□□ -1.04
RDM1-223ENST00000619193 KIAA0586Q9BVV6 1533 aa8.53□□□□□ -1.04
RDM1-223ENST00000619193 STRCQ7RTU9 1775 aa8.53□□□□□ -1.04
RDM1-223ENST00000619193 ZNF219Q9P2Y4 722 aaPredicted RBP8.52□□□□□ -1.05
RDM1-223ENST00000619193 TSHZ2Q9NRE2 1034 aa8.51□□□□□ -1.05
RDM1-223ENST00000619193 CCER2I3L3R5 266 aa8.5□□□□□ -1.05
RDM1-223ENST00000619193 PTPRGP23470 1445 aa8.5□□□□□ -1.05
RDM1-223ENST00000619193 ZCCHC11Q5TAX3 1644 aaKnown RBP8.5□□□□□ -1.05
RDM1-223ENST00000619193 LTBP4Q8N2S1 1624 aa8.5□□□□□ -1.05
RDM1-223ENST00000619193 IQGAP2Q13576 1575 aa8.49□□□□□ -1.05
RDM1-223ENST00000619193 DSG3P32926 999 aa8.49□□□□□ -1.05
RDM1-223ENST00000619193 DDX10Q13206 875 aaKnown RBP8.49□□□□□ -1.05
RDM1-223ENST00000619193 MTUS2Q5JR59 1369 aa8.48□□□□□ -1.05
RDM1-223ENST00000619193 CDK13Q14004 1512 aaKnown RBP8.48□□□□□ -1.05
RDM1-223ENST00000619193 MIA2Q96PC5 1412 aa8.47□□□□□ -1.05
RDM1-223ENST00000619193 SIGLEC1Q9BZZ2 1709 aa8.46□□□□□ -1.05
RDM1-223ENST00000619193 DISP1Q96F81 1524 aa8.46□□□□□ -1.05
RDM1-223ENST00000619193 MYT1Q01538 1121 aa8.46□□□□□ -1.06
RDM1-223ENST00000619193 DNMT1P26358 1616 aaKnown RBP8.46□□□□□ -1.06
RDM1-223ENST00000619193 UHRF1BP1LA0JNW5 1464 aa8.45□□□□□ -1.06
RDM1-223ENST00000619193 KIAA0556O60303 1618 aa8.45□□□□□ -1.06
RDM1-223ENST00000619193 FRMPD1Q5SYB0 1578 aa8.44□□□□□ -1.06
RDM1-223ENST00000619193 ATXN8OSP0DMR3 200 aa8.44□□□□□ -1.06
RDM1-223ENST00000619193 ATF5Q9Y2D1 282 aaPredicted RBP8.44□□□□□ -1.06
RDM1-223ENST00000619193 CD109Q6YHK3 1445 aa8.44□□□□□ -1.06
RDM1-223ENST00000619193 WDR7Q9Y4E6 1490 aa8.44□□□□□ -1.06
RDM1-223ENST00000619193 HIRIP3Q9BW71 556 aaPredicted RBP8.43□□□□□ -1.06
RDM1-223ENST00000619193 ARID4BQ4LE39 1312 aaPredicted RBP8.43□□□□□ -1.06
RDM1-223ENST00000619193 ROCK1Q13464 1354 aa8.43□□□□□ -1.06
RDM1-223ENST00000619193 TONSLQ96HA7 1378 aa8.43□□□□□ -1.06
RDM1-223ENST00000619193 ABCC5O15440 1437 aa8.43□□□□□ -1.06
RDM1-223ENST00000619193 YEATS2Q9ULM3 1422 aa8.43□□□□□ -1.06
RDM1-223ENST00000619193 NUP153P49790 1475 aaKnown RBP8.43□□□□□ -1.06
RDM1-223ENST00000619193 MBD5Q9P267 1494 aa8.43□□□□□ -1.06
RDM1-223ENST00000619193 POLR1AO95602 1720 aaPredicted RBP8.43□□□□□ -1.06
RDM1-223ENST00000619193 NCOA1Q15788 1441 aa8.42□□□□□ -1.06
RDM1-223ENST00000619193 ARAP3Q8WWN8 1544 aa8.42□□□□□ -1.06
RDM1-223ENST00000619193 PREX1Q8TCU6 1659 aa8.42□□□□□ -1.06
RDM1-223ENST00000619193 PZPP20742 1482 aa8.41□□□□□ -1.06
RDM1-223ENST00000619193 DAPK1P53355 1430 aa8.41□□□□□ -1.06
RDM1-223ENST00000619193 SPATA31E1Q6ZUB1 1445 aa8.41□□□□□ -1.06
RDM1-223ENST00000619193 ANKRD30BQ9BXX2 1392 aa8.41□□□□□ -1.06
RDM1-223ENST00000619193 WASHC2AQ641Q2 1341 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms