RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 MYT1LQ9UL68 1186 aa31.43■■■□□ 2.62
PCSK6-218ENST00000619160 SALL2Q9Y467 1007 aaPredicted RBP31.43■■■□□ 2.62
PCSK6-218ENST00000619160 KDM6BO15054 1643 aa31.42■■■□□ 2.62
PCSK6-218ENST00000619160 MAGI3Q5TCQ9 1506 aa31.42■■■□□ 2.62
PCSK6-218ENST00000619160 NOP58Q9Y2X3 529 aaKnown RBP31.42■■■□□ 2.62
PCSK6-218ENST00000619160 LRRIQ1Q96JM4 1722 aa31.42■■■□□ 2.62
PCSK6-218ENST00000619160 CCDC136Q96JN2 1154 aa31.4■■■□□ 2.62
PCSK6-218ENST00000619160 GAPVD1Q14C86 1478 aa31.39■■■□□ 2.61
PCSK6-218ENST00000619160 RTN4Q9NQC3 1192 aaKnown RBP31.38■■■□□ 2.61
PCSK6-218ENST00000619160 AKNAQ7Z591 1439 aa31.37■■■□□ 2.61
PCSK6-218ENST00000619160 SAMD9Q5K651 1589 aa31.37■■■□□ 2.61
PCSK6-218ENST00000619160 HECW1Q76N89 1606 aa31.33■■■□□ 2.61
PCSK6-218ENST00000619160 ANKRD30BQ9BXX2 1392 aa31.3■■■□□ 2.6
PCSK6-218ENST00000619160 TCOF1Q13428 1488 aaKnown RBP31.3■■■□□ 2.6
PCSK6-218ENST00000619160 ZNF644Q9H582 1327 aaPredicted RBP31.3■■■□□ 2.6
PCSK6-218ENST00000619160 THOC2Q8NI27 1593 aaKnown RBP31.28■■■□□ 2.6
PCSK6-218ENST00000619160 URB2Q14146 1524 aaKnown RBP31.28■■■□□ 2.6
PCSK6-218ENST00000619160 NUDCQ9Y266 331 aa31.28■■■□□ 2.6
PCSK6-218ENST00000619160 CDK13Q14004 1512 aaKnown RBP31.27■■■□□ 2.6
PCSK6-218ENST00000619160 ANP32AP39687 249 aaKnown RBP31.27■■■□□ 2.6
PCSK6-218ENST00000619160 ARHGEF11O15085 1522 aa31.27■■■□□ 2.6
PCSK6-218ENST00000619160 IL27Q8NEV9 243 aa31.25■■■□□ 2.59
PCSK6-218ENST00000619160 GCC2Q8IWJ2 1684 aa31.24■■■□□ 2.59
PCSK6-218ENST00000619160 RPRD2Q5VT52 1461 aaKnown RBP31.24■■■□□ 2.59
PCSK6-218ENST00000619160 EPRSP07814 1512 aaKnown RBP31.23■■■□□ 2.59
PCSK6-218ENST00000619160 TMC1Q8TDI8 760 aa31.21■■■□□ 2.59
PCSK6-218ENST00000619160 MIA2Q96PC5 1412 aa31.21■■■□□ 2.59
PCSK6-218ENST00000619160 SMG6Q86US8 1419 aaKnown RBP31.19■■■□□ 2.58
PCSK6-218ENST00000619160 RTL5Q5HYW3 569 aaPredicted RBP31.18■■■□□ 2.58
PCSK6-218ENST00000619160 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.18■■■□□ 2.58
PCSK6-218ENST00000619160 SPATA31E1Q6ZUB1 1445 aa31.18■■■□□ 2.58
PCSK6-218ENST00000619160 TEX14Q8IWB6 1497 aa31.17■■■□□ 2.58
PCSK6-218ENST00000619160 ZBTB47Q9UFB7 747 aaPredicted RBP31.15■■■□□ 2.58
PCSK6-218ENST00000619160 DAPK1P53355 1430 aa31.14■■■□□ 2.58
PCSK6-218ENST00000619160 ZNF777Q9ULD5 760 aaPredicted RBP31.14■■■□□ 2.58
PCSK6-218ENST00000619160 USP47Q96K76 1375 aa31.13■■■□□ 2.57
PCSK6-218ENST00000619160 NPM2Q86SE8 214 aaKnown RBP31.13■■■□□ 2.57
PCSK6-218ENST00000619160 IPO9Q96P70 1041 aaKnown RBP31.12■■■□□ 2.57
PCSK6-218ENST00000619160 ABCA5Q8WWZ7 1642 aa31.12■■■□□ 2.57
PCSK6-218ENST00000619160 DHX29Q7Z478 1369 aaKnown RBP31.1■■■□□ 2.57
PCSK6-218ENST00000619160 ABCC5O15440 1437 aa31.09■■■□□ 2.57
PCSK6-218ENST00000619160 LAMC3Q9Y6N6 1575 aa31.09■■■□□ 2.57
PCSK6-218ENST00000619160 PKD2Q13563 968 aa31.06■■■□□ 2.56
PCSK6-218ENST00000619160 ROCK1Q13464 1354 aa31.05■■■□□ 2.56
PCSK6-218ENST00000619160 PNISRQ8TF01 805 aaKnown RBP31.05■■■□□ 2.56
PCSK6-218ENST00000619160 KDM2AQ9Y2K7 1162 aa31.03■■■□□ 2.56
PCSK6-218ENST00000619160 CFDP1Q9UEE9 299 aaPredicted RBP31.01■■■□□ 2.55
PCSK6-218ENST00000619160 CARD11Q9BXL7 1154 aa31.01■■■□□ 2.55
PCSK6-218ENST00000619160 RNF123Q5XPI4 1314 aa31■■■□□ 2.55
PCSK6-218ENST00000619160 PDS5BQ9NTI5 1447 aa30.97■■■□□ 2.55
PCSK6-218ENST00000619160 IQGAP2Q13576 1575 aa30.96■■■□□ 2.55
PCSK6-218ENST00000619160 DNAJC5BQ9UF47 199 aa30.94■■■□□ 2.54
PCSK6-218ENST00000619160 EXOC6Q8TAG9 804 aa30.94■■■□□ 2.54
PCSK6-218ENST00000619160 KIF21AQ7Z4S6 1674 aa30.92■■■□□ 2.54
PCSK6-218ENST00000619160 WDR62O43379 1518 aa30.92■■■□□ 2.54
PCSK6-218ENST00000619160 ST20-MTHFSA0A0A6YYL1 179 aa30.9■■■□□ 2.54
PCSK6-218ENST00000619160 LAS1LQ9Y4W2 734 aaKnown RBP30.9■■■□□ 2.54
PCSK6-218ENST00000619160 PZPP20742 1482 aa30.9■■■□□ 2.54
PCSK6-218ENST00000619160 RRP1P56182 461 aaKnown RBP30.89■■■□□ 2.53
PCSK6-218ENST00000619160 KIAA1107Q9UPP5 1409 aa30.87■■■□□ 2.53
PCSK6-218ENST00000619160 DNMT1P26358 1616 aaKnown RBP30.85■■■□□ 2.53
PCSK6-218ENST00000619160 RCAN3Q9UKA8 241 aa30.85■■■□□ 2.53
PCSK6-218ENST00000619160 KIF15Q9NS87 1388 aa30.85■■■□□ 2.53
PCSK6-218ENST00000619160 BCORL1Q5H9F3 1711 aa30.85■■■□□ 2.53
PCSK6-218ENST00000619160 ARID4BQ4LE39 1312 aaPredicted RBP30.82■■■□□ 2.52
PCSK6-218ENST00000619160 ROCK2O75116 1388 aaKnown RBP30.82■■■□□ 2.52
PCSK6-218ENST00000619160 DCAF11Q8TEB1 546 aa30.82■■■□□ 2.52
PCSK6-218ENST00000619160 PRG4Q92954 1404 aaPredicted RBP30.81■■■□□ 2.52
PCSK6-218ENST00000619160 MYBBP1AQ9BQG0 1328 aaKnown RBP30.81■■■□□ 2.52
PCSK6-218ENST00000619160 NUP155O75694 1391 aa30.79■■■□□ 2.52
PCSK6-218ENST00000619160 PDE4AP27815 886 aa30.77■■■□□ 2.52
PCSK6-218ENST00000619160 POLR1AO95602 1720 aaPredicted RBP30.77■■■□□ 2.52
PCSK6-218ENST00000619160 NUP153P49790 1475 aaKnown RBP30.76■■■□□ 2.52
PCSK6-218ENST00000619160 MBD5Q9P267 1494 aa30.76■■■□□ 2.51
PCSK6-218ENST00000619160 TCERG1O14776 1098 aaKnown RBP30.76■■■□□ 2.51
PCSK6-218ENST00000619160 RALBP1Q15311 655 aa30.76■■■□□ 2.51
PCSK6-218ENST00000619160 NEFMP07197 916 aa30.75■■■□□ 2.51
PCSK6-218ENST00000619160 CAMSAP2Q08AD1 1489 aa30.74■■■□□ 2.51
PCSK6-218ENST00000619160 ANKRD30AQ9BXX3 1397 aa30.74■■■□□ 2.51
PCSK6-218ENST00000619160 BRD4O60885 1362 aaPredicted RBP30.74■■■□□ 2.51
PCSK6-218ENST00000619160 PLIN1O60240 522 aa30.73■■■□□ 2.51
PCSK6-218ENST00000619160 CDCA7LQ96GN5 454 aa30.72■■■□□ 2.51
PCSK6-218ENST00000619160 TARBP1Q13395 1621 aaKnown RBP30.72■■■□□ 2.51
PCSK6-218ENST00000619160 ANKRD50Q9ULJ7 1429 aa30.71■■■□□ 2.51
PCSK6-218ENST00000619160 LRPPRCP42704 1394 aaKnown RBP30.7■■■□□ 2.5
PCSK6-218ENST00000619160 SKAP1Q86WV1 359 aa30.69■■■□□ 2.5
PCSK6-218ENST00000619160 KDM5CP41229 1560 aa30.69■■■□□ 2.5
PCSK6-218ENST00000619160 EIF5BO60841 1220 aaKnown RBP30.68■■■□□ 2.5
PCSK6-218ENST00000619160 NLRP13Q86W25 1043 aa30.67■■■□□ 2.5
PCSK6-218ENST00000619160 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
PCSK6-218ENST00000619160 CC2D1BQ5T0F9 858 aaKnown RBP30.66■■■□□ 2.5
PCSK6-218ENST00000619160 TROQ12816 1431 aaPredicted RBP30.65■■■□□ 2.5
PCSK6-218ENST00000619160 RGL3Q3MIN7 710 aa30.65■■■□□ 2.5
PCSK6-218ENST00000619160 KIF14Q15058 1648 aa30.65■■■□□ 2.5
PCSK6-218ENST00000619160 BACH2Q9BYV9 841 aa30.64■■■□□ 2.5
PCSK6-218ENST00000619160 PBRM1Q86U86 1689 aa30.63■■■□□ 2.49
PCSK6-218ENST00000619160 FBLN2P98095 1184 aa30.62■■■□□ 2.49
PCSK6-218ENST00000619160 KTN1Q86UP2 1357 aaKnown RBP30.62■■■□□ 2.49
PCSK6-218ENST00000619160 RALGAPBQ86X10 1494 aa30.62■■■□□ 2.49
PCSK6-218ENST00000619160 TSPY4P0CV99 314 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms