RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.09■■□□□ 1.13
SEMA3B-214ENST00000619119 RAPGEF6Q8TEU7 1601 aa22.09■■□□□ 1.13
SEMA3B-214ENST00000619119 IL27Q8NEV9 243 aa22.07■■□□□ 1.12
SEMA3B-214ENST00000619119 RRP7BPQ9NSQ0 103 aa22.07■■□□□ 1.12
SEMA3B-214ENST00000619119 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
SEMA3B-214ENST00000619119 PRG4Q92954 1404 aaPredicted RBP22.04■■□□□ 1.12
SEMA3B-214ENST00000619119 PTPN23Q9H3S7 1636 aa22.04■■□□□ 1.12
SEMA3B-214ENST00000619119 ARHGEF11O15085 1522 aa22.04■■□□□ 1.12
SEMA3B-214ENST00000619119 TRIM52Q96A61 297 aa22.03■■□□□ 1.12
SEMA3B-214ENST00000619119 ZNF644Q9H582 1327 aaPredicted RBP22.02■■□□□ 1.12
SEMA3B-214ENST00000619119 MAPKBP1O60336 1514 aa22.01■■□□□ 1.11
SEMA3B-214ENST00000619119 CHD1O14646 1710 aa21.99■■□□□ 1.11
SEMA3B-214ENST00000619119 ZNF777Q9ULD5 760 aaPredicted RBP21.99■■□□□ 1.11
SEMA3B-214ENST00000619119 IRX6P78412 446 aaPredicted RBP21.96■■□□□ 1.11
SEMA3B-214ENST00000619119 HFM1A2PYH4 1435 aa21.95■■□□□ 1.1
SEMA3B-214ENST00000619119 PTPRGP23470 1445 aa21.95■■□□□ 1.1
SEMA3B-214ENST00000619119 NAIPQ13075 1403 aa21.94■■□□□ 1.1
SEMA3B-214ENST00000619119 PLEKHD1A6NEE1 506 aa21.93■■□□□ 1.1
SEMA3B-214ENST00000619119 TROQ12816 1431 aaPredicted RBP21.92■■□□□ 1.1
SEMA3B-214ENST00000619119 CFDP1Q9UEE9 299 aaPredicted RBP21.92■■□□□ 1.1
SEMA3B-214ENST00000619119 MIA2Q96PC5 1412 aa21.91■■□□□ 1.1
SEMA3B-214ENST00000619119 TCOF1Q13428 1488 aaKnown RBP21.91■■□□□ 1.1
SEMA3B-214ENST00000619119 NOP58Q9Y2X3 529 aaKnown RBP21.9■■□□□ 1.1
SEMA3B-214ENST00000619119 PAK3O75914 559 aaPredicted RBP21.87■■□□□ 1.09
SEMA3B-214ENST00000619119 ATP10BO94823 1461 aa21.87■■□□□ 1.09
SEMA3B-214ENST00000619119 KIF14Q15058 1648 aa21.87■■□□□ 1.09
SEMA3B-214ENST00000619119 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
SEMA3B-214ENST00000619119 ABCA8O94911 1581 aa21.86■■□□□ 1.09
SEMA3B-214ENST00000619119 ERCC6L2Q5T890 1561 aa21.84■■□□□ 1.09
SEMA3B-214ENST00000619119 DDX10Q13206 875 aaKnown RBP21.83■■□□□ 1.09
SEMA3B-214ENST00000619119 EIF5BO60841 1220 aaKnown RBP21.83■■□□□ 1.08
SEMA3B-214ENST00000619119 UACAQ9BZF9 1416 aa21.82■■□□□ 1.08
SEMA3B-214ENST00000619119 DAPK1P53355 1430 aa21.81■■□□□ 1.08
SEMA3B-214ENST00000619119 GPATCH8Q9UKJ3 1502 aaKnown RBP21.81■■□□□ 1.08
SEMA3B-214ENST00000619119 ABCC5O15440 1437 aa21.8■■□□□ 1.08
SEMA3B-214ENST00000619119 KDM6BO15054 1643 aa21.78■■□□□ 1.08
SEMA3B-214ENST00000619119 FOXD1Q16676 465 aa21.77■■□□□ 1.08
SEMA3B-214ENST00000619119 CAMSAP2Q08AD1 1489 aa21.76■■□□□ 1.07
SEMA3B-214ENST00000619119 DAXXQ9UER7 740 aaPredicted RBP21.75■■□□□ 1.07
SEMA3B-214ENST00000619119 PKNOX2Q96KN3 472 aa21.73■■□□□ 1.07
SEMA3B-214ENST00000619119 TONSLQ96HA7 1378 aa21.72■■□□□ 1.07
SEMA3B-214ENST00000619119 DNMT1P26358 1616 aaKnown RBP21.71■■□□□ 1.07
SEMA3B-214ENST00000619119 SHROOM2Q13796 1616 aa21.71■■□□□ 1.07
SEMA3B-214ENST00000619119 MPHOSPH9Q99550 1183 aa21.71■■□□□ 1.07
SEMA3B-214ENST00000619119 HIRIP3Q9BW71 556 aaPredicted RBP21.71■■□□□ 1.07
SEMA3B-214ENST00000619119 HNRNPMP52272 730 aaKnown RBP eCLIP21.69■■□□□ 1.06
SEMA3B-214ENST00000619119 GCC2Q8IWJ2 1684 aa21.68■■□□□ 1.06
SEMA3B-214ENST00000619119 ITSN2Q9NZM3 1697 aa21.68■■□□□ 1.06
SEMA3B-214ENST00000619119 ADCY10Q96PN6 1610 aa21.68■■□□□ 1.06
SEMA3B-214ENST00000619119 AKNAQ7Z591 1439 aa21.68■■□□□ 1.06
SEMA3B-214ENST00000619119 PPP1R15AO75807 674 aaPredicted RBP21.67■■□□□ 1.06
SEMA3B-214ENST00000619119 ABCC10Q5T3U5 1492 aa21.67■■□□□ 1.06
SEMA3B-214ENST00000619119 ROCK1Q13464 1354 aa21.65■■□□□ 1.06
SEMA3B-214ENST00000619119 SLC4A1APQ9BWU0 796 aaKnown RBP21.64■■□□□ 1.05
SEMA3B-214ENST00000619119 CDC42BPAQ5VT25 1732 aa21.63■■□□□ 1.05
SEMA3B-214ENST00000619119 DENND4BO75064 1496 aaPredicted RBP21.63■■□□□ 1.05
SEMA3B-214ENST00000619119 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
SEMA3B-214ENST00000619119 TIMELESSQ9UNS1 1208 aa21.62■■□□□ 1.05
SEMA3B-214ENST00000619119 NCOA1Q15788 1441 aa21.61■■□□□ 1.05
SEMA3B-214ENST00000619119 TSPY4P0CV99 314 aa21.6■■□□□ 1.05
SEMA3B-214ENST00000619119 TSPY10P0CW01 314 aa21.6■■□□□ 1.05
SEMA3B-214ENST00000619119 B4GALNT3Q6L9W6 998 aa21.6■■□□□ 1.05
SEMA3B-214ENST00000619119 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
SEMA3B-214ENST00000619119 ANP32CO43423 234 aa21.58■■□□□ 1.05
SEMA3B-214ENST00000619119 ANKRD30AQ9BXX3 1397 aa21.58■■□□□ 1.04
SEMA3B-214ENST00000619119 PPP4R2Q9NY27 417 aa21.57■■□□□ 1.04
SEMA3B-214ENST00000619119 HNRNPUQ00839 825 aaKnown RBP eCLIP21.56■■□□□ 1.04
SEMA3B-214ENST00000619119 CCER2I3L3R5 266 aa21.55■■□□□ 1.04
SEMA3B-214ENST00000619119 C9orf84Q5VXU9 1444 aa21.54■■□□□ 1.04
SEMA3B-214ENST00000619119 ZBTB47Q9UFB7 747 aaPredicted RBP21.53■■□□□ 1.04
SEMA3B-214ENST00000619119 ANP32AP39687 249 aaKnown RBP21.53■■□□□ 1.04
SEMA3B-214ENST00000619119 TTC37Q6PGP7 1564 aa21.52■■□□□ 1.04
SEMA3B-214ENST00000619119 PLEKHG5O94827 1062 aa21.52■■□□□ 1.03
SEMA3B-214ENST00000619119 ANKRD50Q9ULJ7 1429 aa21.51■■□□□ 1.03
SEMA3B-214ENST00000619119 ARHGAP5Q13017 1502 aa21.51■■□□□ 1.03
SEMA3B-214ENST00000619119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.5■■□□□ 1.03
SEMA3B-214ENST00000619119 IPO9Q96P70 1041 aaKnown RBP21.49■■□□□ 1.03
SEMA3B-214ENST00000619119 L3MBTL2Q969R5 705 aa21.49■■□□□ 1.03
SEMA3B-214ENST00000619119 BRPF3Q9ULD4 1205 aa21.48■■□□□ 1.03
SEMA3B-214ENST00000619119 CDC42BPBQ9Y5S2 1711 aa21.48■■□□□ 1.03
SEMA3B-214ENST00000619119 CROCC2H7BZ55 1655 aa21.48■■□□□ 1.03
SEMA3B-214ENST00000619119 ADGRL2O95490 1459 aa21.48■■□□□ 1.03
SEMA3B-214ENST00000619119 SAMD9LQ8IVG5 1584 aa21.48■■□□□ 1.03
SEMA3B-214ENST00000619119 PKD2Q13563 968 aa21.47■■□□□ 1.03
SEMA3B-214ENST00000619119 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
SEMA3B-214ENST00000619119 ADGBQ8N7X0 1667 aa21.47■■□□□ 1.03
SEMA3B-214ENST00000619119 KIF15Q9NS87 1388 aa21.47■■□□□ 1.03
SEMA3B-214ENST00000619119 MBD5Q9P267 1494 aa21.47■■□□□ 1.03
SEMA3B-214ENST00000619119 ZCCHC11Q5TAX3 1644 aaKnown RBP21.46■■□□□ 1.03
SEMA3B-214ENST00000619119 ANKRD30BQ9BXX2 1392 aa21.46■■□□□ 1.03
SEMA3B-214ENST00000619119 NUP155O75694 1391 aa21.45■■□□□ 1.02
SEMA3B-214ENST00000619119 PREX2Q70Z35 1606 aa21.45■■□□□ 1.02
SEMA3B-214ENST00000619119 PZPP20742 1482 aa21.44■■□□□ 1.02
SEMA3B-214ENST00000619119 SYCP2Q9BX26 1530 aa21.44■■□□□ 1.02
SEMA3B-214ENST00000619119 LAS1LQ9Y4W2 734 aaKnown RBP21.43■■□□□ 1.02
SEMA3B-214ENST00000619119 CCDC141Q6ZP82 1450 aa21.42■■□□□ 1.02
SEMA3B-214ENST00000619119 KDM5BQ9UGL1 1544 aa21.42■■□□□ 1.02
SEMA3B-214ENST00000619119 WASHC2AQ641Q2 1341 aa21.42■■□□□ 1.02
SEMA3B-214ENST00000619119 NEFMP07197 916 aa21.41■■□□□ 1.02
SEMA3B-214ENST00000619119 SHANK2Q9UPX8 1470 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms