RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 DAPK1P53355 1430 aa18.7■□□□□ 0.58
TNFAIP3-209ENST00000619035 DNMT1P26358 1616 aaKnown RBP18.7■□□□□ 0.58
TNFAIP3-209ENST00000619035 NAIPQ13075 1403 aa18.7■□□□□ 0.58
TNFAIP3-209ENST00000619035 KCNH8Q96L42 1107 aa18.69■□□□□ 0.58
TNFAIP3-209ENST00000619035 PREX2Q70Z35 1606 aa18.68■□□□□ 0.58
TNFAIP3-209ENST00000619035 ABCC5O15440 1437 aa18.67■□□□□ 0.58
TNFAIP3-209ENST00000619035 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.66■□□□□ 0.58
TNFAIP3-209ENST00000619035 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
TNFAIP3-209ENST00000619035 ROCK1Q13464 1354 aa18.66■□□□□ 0.58
TNFAIP3-209ENST00000619035 TTC37Q6PGP7 1564 aa18.65■□□□□ 0.58
TNFAIP3-209ENST00000619035 CDC42BPBQ9Y5S2 1711 aa18.64■□□□□ 0.57
TNFAIP3-209ENST00000619035 MYO5CQ9NQX4 1742 aa18.63■□□□□ 0.57
TNFAIP3-209ENST00000619035 WDR7Q9Y4E6 1490 aa18.63■□□□□ 0.57
TNFAIP3-209ENST00000619035 GCC2Q8IWJ2 1684 aa18.63■□□□□ 0.57
TNFAIP3-209ENST00000619035 MAPKBP1O60336 1514 aa18.62■□□□□ 0.57
TNFAIP3-209ENST00000619035 ARAP3Q8WWN8 1544 aa18.61■□□□□ 0.57
TNFAIP3-209ENST00000619035 NPM1P06748 294 aaKnown RBP eCLIP18.61■□□□□ 0.57
TNFAIP3-209ENST00000619035 RSPH4AQ5TD94 716 aa18.61■□□□□ 0.57
TNFAIP3-209ENST00000619035 ARHGEF5Q12774 1597 aa18.6■□□□□ 0.57
TNFAIP3-209ENST00000619035 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
TNFAIP3-209ENST00000619035 PLEKHH2Q8IVE3 1493 aa18.59■□□□□ 0.57
TNFAIP3-209ENST00000619035 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
TNFAIP3-209ENST00000619035 ARHGAP5Q13017 1502 aa18.59■□□□□ 0.57
TNFAIP3-209ENST00000619035 PLCH2O75038 1416 aa18.58■□□□□ 0.57
TNFAIP3-209ENST00000619035 KDM6BO15054 1643 aa18.58■□□□□ 0.56
TNFAIP3-209ENST00000619035 ADGBQ8N7X0 1667 aa18.57■□□□□ 0.56
TNFAIP3-209ENST00000619035 ADGRL2O95490 1459 aa18.57■□□□□ 0.56
TNFAIP3-209ENST00000619035 HNRNPMP52272 730 aaKnown RBP eCLIP18.57■□□□□ 0.56
TNFAIP3-209ENST00000619035 SAMD9LQ8IVG5 1584 aa18.57■□□□□ 0.56
TNFAIP3-209ENST00000619035 ASXL2Q76L83 1435 aa18.56■□□□□ 0.56
TNFAIP3-209ENST00000619035 KIAA1107Q9UPP5 1409 aa18.56■□□□□ 0.56
TNFAIP3-209ENST00000619035 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
TNFAIP3-209ENST00000619035 ABCA9Q8IUA7 1624 aa18.55■□□□□ 0.56
TNFAIP3-209ENST00000619035 MBD5Q9P267 1494 aa18.54■□□□□ 0.56
TNFAIP3-209ENST00000619035 RIMBP3CA6NJZ7 1639 aa18.54■□□□□ 0.56
TNFAIP3-209ENST00000619035 RIMBP3BA6NNM3 1639 aa18.54■□□□□ 0.56
TNFAIP3-209ENST00000619035 RIMBP3Q9UFD9 1639 aa18.54■□□□□ 0.56
TNFAIP3-209ENST00000619035 NCOA1Q15788 1441 aa18.52■□□□□ 0.56
TNFAIP3-209ENST00000619035 TSPY4P0CV99 314 aa18.52■□□□□ 0.55
TNFAIP3-209ENST00000619035 TSPY10P0CW01 314 aa18.52■□□□□ 0.55
TNFAIP3-209ENST00000619035 EFCAB2Q5VUJ9 269 aa18.52■□□□□ 0.55
TNFAIP3-209ENST00000619035 ANKRD30AQ9BXX3 1397 aa18.52■□□□□ 0.55
TNFAIP3-209ENST00000619035 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
TNFAIP3-209ENST00000619035 NEUROD1Q13562 356 aa18.51■□□□□ 0.55
TNFAIP3-209ENST00000619035 CCDC141Q6ZP82 1450 aa18.51■□□□□ 0.55
TNFAIP3-209ENST00000619035 SYCP2Q9BX26 1530 aa18.51■□□□□ 0.55
TNFAIP3-209ENST00000619035 SIN3AQ96ST3 1273 aa18.51■□□□□ 0.55
TNFAIP3-209ENST00000619035 MAST1Q9Y2H9 1570 aa18.48■□□□□ 0.55
TNFAIP3-209ENST00000619035 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
TNFAIP3-209ENST00000619035 DIEXFQ68CQ4 756 aaKnown RBP18.46■□□□□ 0.55
TNFAIP3-209ENST00000619035 ABCC1P33527 1531 aa18.45■□□□□ 0.54
TNFAIP3-209ENST00000619035 CYB5RLQ6IPT4 315 aa18.43■□□□□ 0.54
TNFAIP3-209ENST00000619035 ANKRD50Q9ULJ7 1429 aa18.42■□□□□ 0.54
TNFAIP3-209ENST00000619035 MPHOSPH9Q99550 1183 aa18.42■□□□□ 0.54
TNFAIP3-209ENST00000619035 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
TNFAIP3-209ENST00000619035 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
TNFAIP3-209ENST00000619035 FANCAO15360 1455 aa18.4■□□□□ 0.54
TNFAIP3-209ENST00000619035 DENND4BO75064 1496 aaPredicted RBP18.4■□□□□ 0.54
TNFAIP3-209ENST00000619035 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.54
TNFAIP3-209ENST00000619035 PLXNC1O60486 1568 aa18.39■□□□□ 0.53
TNFAIP3-209ENST00000619035 CFAP74Q9C0B2 1584 aa18.39■□□□□ 0.53
TNFAIP3-209ENST00000619035 FOXD1Q16676 465 aa18.38■□□□□ 0.53
TNFAIP3-209ENST00000619035 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
TNFAIP3-209ENST00000619035 RTEL1-TNFRSF6BF6WH68 1400 aa18.36■□□□□ 0.53
TNFAIP3-209ENST00000619035 CD109Q6YHK3 1445 aa18.36■□□□□ 0.53
TNFAIP3-209ENST00000619035 TRAPPC8Q9Y2L5 1435 aa18.35■□□□□ 0.53
TNFAIP3-209ENST00000619035 GLI2P10070 1586 aa18.35■□□□□ 0.53
TNFAIP3-209ENST00000619035 TONSLQ96HA7 1378 aa18.34■□□□□ 0.53
TNFAIP3-209ENST00000619035 ADGRL1O94910 1474 aa18.33■□□□□ 0.52
TNFAIP3-209ENST00000619035 PZPP20742 1482 aa18.33■□□□□ 0.52
TNFAIP3-209ENST00000619035 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
TNFAIP3-209ENST00000619035 DUOX2Q9NRD8 1548 aa18.31■□□□□ 0.52
TNFAIP3-209ENST00000619035 NUP155O75694 1391 aa18.31■□□□□ 0.52
TNFAIP3-209ENST00000619035 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
TNFAIP3-209ENST00000619035 NEO1Q92859 1461 aa18.3■□□□□ 0.52
TNFAIP3-209ENST00000619035 MAP3K4Q9Y6R4 1608 aa18.3■□□□□ 0.52
TNFAIP3-209ENST00000619035 SPAG9O60271 1321 aaKnown RBP18.29■□□□□ 0.52
TNFAIP3-209ENST00000619035 SCAPERQ9BY12 1400 aa18.29■□□□□ 0.52
TNFAIP3-209ENST00000619035 ERBINQ96RT1 1412 aa18.28■□□□□ 0.52
TNFAIP3-209ENST00000619035 MYT1LQ9UL68 1186 aa18.27■□□□□ 0.52
TNFAIP3-209ENST00000619035 ZFYVE16Q7Z3T8 1539 aa18.27■□□□□ 0.52
TNFAIP3-209ENST00000619035 PKD2Q13563 968 aa18.26■□□□□ 0.51
TNFAIP3-209ENST00000619035 ANKRD30BQ9BXX2 1392 aa18.26■□□□□ 0.51
TNFAIP3-209ENST00000619035 INO80Q9ULG1 1556 aaPredicted RBP18.26■□□□□ 0.51
TNFAIP3-209ENST00000619035 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
TNFAIP3-209ENST00000619035 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
TNFAIP3-209ENST00000619035 DIP2BQ9P265 1576 aa18.24■□□□□ 0.51
TNFAIP3-209ENST00000619035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.519e-8■■□□□ 12.2
TNFAIP3-209ENST00000619035 ATP7AQ04656 1500 aa18.24■□□□□ 0.51
TNFAIP3-209ENST00000619035 UNC13BO14795 1591 aa18.23■□□□□ 0.51
TNFAIP3-209ENST00000619035 KDM5CP41229 1560 aa18.21■□□□□ 0.51
TNFAIP3-209ENST00000619035 POGZQ7Z3K3 1410 aa18.21■□□□□ 0.51
TNFAIP3-209ENST00000619035 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
TNFAIP3-209ENST00000619035 FAM135AQ9P2D6 1515 aa18.19■□□□□ 0.5
TNFAIP3-209ENST00000619035 RPRD2Q5VT52 1461 aaKnown RBP18.19■□□□□ 0.5
TNFAIP3-209ENST00000619035 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
TNFAIP3-209ENST00000619035 EIF2AK4Q9P2K8 1649 aaKnown RBP18.17■□□□□ 0.5
TNFAIP3-209ENST00000619035 IQGAP3Q86VI3 1631 aa18.17■□□□□ 0.5
TNFAIP3-209ENST00000619035 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
TNFAIP3-209ENST00000619035 FAM69CQ0P6D2 419 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms