RNA–Protein interactions for RNA: ENST00000618921.4

CBWD3-214, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-214ENST00000618921 CFAP43Q8NDM7 1665 aa10.68□□□□□ -0.7
CBWD3-214ENST00000618921 RAPGEF3O95398 923 aa10.67□□□□□ -0.7
CBWD3-214ENST00000618921 PPARGC1BQ86YN6 1023 aaKnown RBP10.67□□□□□ -0.7
CBWD3-214ENST00000618921 EEA1Q15075 1411 aa10.67□□□□□ -0.7
CBWD3-214ENST00000618921 RNF216Q9NWF9 866 aaPredicted RBP10.67□□□□□ -0.7
CBWD3-214ENST00000618921 ARAP3Q8WWN8 1544 aa10.66□□□□□ -0.7
CBWD3-214ENST00000618921 ARID3CA6NKF2 412 aa10.65□□□□□ -0.7
CBWD3-214ENST00000618921 ARID4BQ4LE39 1312 aaPredicted RBP10.65□□□□□ -0.71
CBWD3-214ENST00000618921 ADAMTSL3P82987 1691 aa10.64□□□□□ -0.71
CBWD3-214ENST00000618921 LMTK3Q96Q04 1460 aa10.63□□□□□ -0.71
CBWD3-214ENST00000618921 ABCA8O94911 1581 aa10.63□□□□□ -0.71
CBWD3-214ENST00000618921 HSPA2P54652 639 aa10.62□□□□□ -0.71
CBWD3-214ENST00000618921 CERKQ8TCT0 537 aa10.61□□□□□ -0.71
CBWD3-214ENST00000618921 FBXO3Q9UK99 471 aa10.61□□□□□ -0.71
CBWD3-214ENST00000618921 PHLDB1Q86UU1 1377 aa10.61□□□□□ -0.71
CBWD3-214ENST00000618921 ILDR2Q71H61 639 aa10.6□□□□□ -0.71
CBWD3-214ENST00000618921 PCF11O94913 1555 aaKnown RBP10.6□□□□□ -0.71
CBWD3-214ENST00000618921 GOLGA3Q08378 1498 aa10.6□□□□□ -0.71
CBWD3-214ENST00000618921 P3H3Q8IVL6 736 aa10.6□□□□□ -0.71
CBWD3-214ENST00000618921 ATP10BO94823 1461 aa10.59□□□□□ -0.71
CBWD3-214ENST00000618921 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.58□□□□□ -0.72
CBWD3-214ENST00000618921 BCORL1Q5H9F3 1711 aa10.58□□□□□ -0.72
CBWD3-214ENST00000618921 MADDQ8WXG6 1647 aa10.57□□□□□ -0.72
CBWD3-214ENST00000618921 SOCS7O14512 581 aa10.57□□□□□ -0.72
CBWD3-214ENST00000618921 MAPK8IP2Q13387 824 aaPredicted RBP10.57□□□□□ -0.72
CBWD3-214ENST00000618921 PAXIP1Q6ZW49 1069 aaPredicted RBP10.55□□□□□ -0.72
CBWD3-214ENST00000618921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.55□□□□□ -0.72
CBWD3-214ENST00000618921 HNRNPUL2Q1KMD3 747 aaKnown RBP10.55□□□□□ -0.72
CBWD3-214ENST00000618921 DISP3Q9P2K9 1392 aa10.54□□□□□ -0.72
CBWD3-214ENST00000618921 CTTNBP2Q8WZ74 1663 aa10.54□□□□□ -0.72
CBWD3-214ENST00000618921 ABCA9Q8IUA7 1624 aa10.54□□□□□ -0.72
CBWD3-214ENST00000618921 NEO1Q92859 1461 aa10.54□□□□□ -0.72
CBWD3-214ENST00000618921 CEP162Q5TB80 1403 aa10.54□□□□□ -0.72
CBWD3-214ENST00000618921 TMEM132AQ24JP5 1023 aa10.54□□□□□ -0.72
CBWD3-214ENST00000618921 CFAP44Q96MT7 982 aa10.53□□□□□ -0.72
CBWD3-214ENST00000618921 RIMS1Q86UR5 1692 aaKnown RBP10.52□□□□□ -0.72
CBWD3-214ENST00000618921 FRMPD1Q5SYB0 1578 aa10.52□□□□□ -0.73
CBWD3-214ENST00000618921 PKD2Q13563 968 aa10.51□□□□□ -0.73
CBWD3-214ENST00000618921 BBXQ8WY36 941 aaPredicted RBP10.51□□□□□ -0.73
CBWD3-214ENST00000618921 MLECQ14165 292 aa10.51□□□□□ -0.73
CBWD3-214ENST00000618921 DENND4BO75064 1496 aaPredicted RBP10.49□□□□□ -0.73
CBWD3-214ENST00000618921 PRXQ9BXM0 1461 aa10.48□□□□□ -0.73
CBWD3-214ENST00000618921 AKNAQ7Z591 1439 aa10.48□□□□□ -0.73
CBWD3-214ENST00000618921 PLEKHD1A6NEE1 506 aa10.48□□□□□ -0.73
CBWD3-214ENST00000618921 POGZQ7Z3K3 1410 aa10.47□□□□□ -0.73
CBWD3-214ENST00000618921 VASPP50552 380 aaPredicted RBP10.47□□□□□ -0.73
CBWD3-214ENST00000618921 FHOD3Q2V2M9 1422 aa10.47□□□□□ -0.73
CBWD3-214ENST00000618921 UBTFP17480 764 aaKnown RBP10.46□□□□□ -0.73
CBWD3-214ENST00000618921 CEBPAP49715 358 aaPredicted RBP10.46□□□□□ -0.73
CBWD3-214ENST00000618921 NBR1Q14596 966 aa10.46□□□□□ -0.74
CBWD3-214ENST00000618921 C14orf37Q86TY3 774 aa10.46□□□□□ -0.74
CBWD3-214ENST00000618921 ARHGEF40Q8TER5 1519 aa10.45□□□□□ -0.74
CBWD3-214ENST00000618921 RICTORQ6R327 1708 aa10.45□□□□□ -0.74
CBWD3-214ENST00000618921 DMRT2Q9Y5R5 561 aa10.45□□□□□ -0.74
CBWD3-214ENST00000618921 YEATS2Q9ULM3 1422 aa10.45□□□□□ -0.74
CBWD3-214ENST00000618921 SIGLEC1Q9BZZ2 1709 aa10.45□□□□□ -0.74
CBWD3-214ENST00000618921 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
CBWD3-214ENST00000618921 FANCAO15360 1455 aa10.44□□□□□ -0.74
CBWD3-214ENST00000618921 RAPGEF6Q8TEU7 1601 aa10.43□□□□□ -0.74
CBWD3-214ENST00000618921 NPM2Q86SE8 214 aaKnown RBP10.43□□□□□ -0.74
CBWD3-214ENST00000618921 NUP153P49790 1475 aaKnown RBP10.43□□□□□ -0.74
CBWD3-214ENST00000618921 TSHZ2Q9NRE2 1034 aa10.42□□□□□ -0.74
CBWD3-214ENST00000618921 EIF5BO60841 1220 aaKnown RBP10.41□□□□□ -0.74
CBWD3-214ENST00000618921 ZFYVE16Q7Z3T8 1539 aa10.41□□□□□ -0.74
CBWD3-214ENST00000618921 STRCQ7RTU9 1775 aa10.4□□□□□ -0.74
CBWD3-214ENST00000618921 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
CBWD3-214ENST00000618921 MAGI2Q86UL8 1455 aa10.4□□□□□ -0.74
CBWD3-214ENST00000618921 FER1L4A9Z1Z3 1794 aa10.4□□□□□ -0.74
CBWD3-214ENST00000618921 SETD1BQ9UPS6 1966 aaKnown RBP10.4□□□□□ -0.74
CBWD3-214ENST00000618921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.4□□□□□ -0.75
CBWD3-214ENST00000618921 CCER1Q8TC90 406 aaPredicted RBP10.4□□□□□ -0.75
CBWD3-214ENST00000618921 SAMD9Q5K651 1589 aa10.39□□□□□ -0.75
CBWD3-214ENST00000618921 ZMYM4Q5VZL5 1548 aa10.39□□□□□ -0.75
CBWD3-214ENST00000618921 SCAPERQ9BY12 1400 aa10.39□□□□□ -0.75
CBWD3-214ENST00000618921 TTC37Q6PGP7 1564 aa10.39□□□□□ -0.75
CBWD3-214ENST00000618921 EFCAB5A4FU69 1503 aa10.39□□□□□ -0.75
CBWD3-214ENST00000618921 HECW1Q76N89 1606 aa10.38□□□□□ -0.75
CBWD3-214ENST00000618921 ATP10AO60312 1499 aa10.38□□□□□ -0.75
CBWD3-214ENST00000618921 CLIP1P30622 1438 aa10.37□□□□□ -0.75
CBWD3-214ENST00000618921 ARHGEF12Q9NZN5 1544 aa10.37□□□□□ -0.75
CBWD3-214ENST00000618921 PREX1Q8TCU6 1659 aa10.37□□□□□ -0.75
CBWD3-214ENST00000618921 CFAP74Q9C0B2 1584 aa10.36□□□□□ -0.75
CBWD3-214ENST00000618921 SPATA31D1Q6ZQQ2 1576 aa10.35□□□□□ -0.75
CBWD3-214ENST00000618921 PLCH2O75038 1416 aa10.35□□□□□ -0.75
CBWD3-214ENST00000618921 EFCAB2Q5VUJ9 269 aa10.34□□□□□ -0.75
CBWD3-214ENST00000618921 AFAP1Q8N556 730 aa10.34□□□□□ -0.75
CBWD3-214ENST00000618921 SPRYD3Q8NCJ5 442 aa10.34□□□□□ -0.75
CBWD3-214ENST00000618921 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
CBWD3-214ENST00000618921 PTPRTO14522 1441 aa10.34□□□□□ -0.75
CBWD3-214ENST00000618921 VPS8Q8N3P4 1428 aa10.34□□□□□ -0.75
CBWD3-214ENST00000618921 C9orf84Q5VXU9 1444 aa10.33□□□□□ -0.76
CBWD3-214ENST00000618921 MYT1LQ9UL68 1186 aa10.33□□□□□ -0.76
CBWD3-214ENST00000618921 HOXD11P31277 338 aaPredicted RBP10.32□□□□□ -0.76
CBWD3-214ENST00000618921 LTBP4Q8N2S1 1624 aa10.31□□□□□ -0.76
CBWD3-214ENST00000618921 ATP1B4Q9UN42 357 aaPredicted RBP10.3□□□□□ -0.76
CBWD3-214ENST00000618921 CDK13Q14004 1512 aaKnown RBP10.29□□□□□ -0.76
CBWD3-214ENST00000618921 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
CBWD3-214ENST00000618921 UBAP1LF5GYI3 381 aa10.29□□□□□ -0.76
CBWD3-214ENST00000618921 ESF1Q9H501 851 aaKnown RBP10.29□□□□□ -0.76
CBWD3-214ENST00000618921 TRAPPC8Q9Y2L5 1435 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms