RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 PHF14O94880 888 aa20.64■□□□□ 0.89
CNTNAP3B-214ENST00000618777 RCAN3Q9UKA8 241 aa20.64■□□□□ 0.89
CNTNAP3B-214ENST00000618777 OS9Q13438 667 aaPredicted RBP20.63■□□□□ 0.89
CNTNAP3B-214ENST00000618777 TULP1O00294 542 aaPredicted RBP20.63■□□□□ 0.89
CNTNAP3B-214ENST00000618777 BRPF3Q9ULD4 1205 aa20.62■□□□□ 0.89
CNTNAP3B-214ENST00000618777 TAOK2Q9UL54 1235 aa20.62■□□□□ 0.89
CNTNAP3B-214ENST00000618777 RWDD1Q9H446 243 aaPredicted RBP20.62■□□□□ 0.89
CNTNAP3B-214ENST00000618777 CSPP1Q1MSJ5 1256 aa20.6■□□□□ 0.89
CNTNAP3B-214ENST00000618777 CEP162Q5TB80 1403 aa20.59■□□□□ 0.89
CNTNAP3B-214ENST00000618777 CCDC66A2RUB6 948 aa20.59■□□□□ 0.89
CNTNAP3B-214ENST00000618777 SKOR2Q2VWA4 1001 aaPredicted RBP20.59■□□□□ 0.89
CNTNAP3B-214ENST00000618777 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
CNTNAP3B-214ENST00000618777 ZMYND15Q9H091 742 aa20.59■□□□□ 0.89
CNTNAP3B-214ENST00000618777 GPS2Q13227 327 aa20.58■□□□□ 0.88
CNTNAP3B-214ENST00000618777 CC2D1BQ5T0F9 858 aaKnown RBP20.55■□□□□ 0.88
CNTNAP3B-214ENST00000618777 TEX35Q5T0J7 233 aa20.54■□□□□ 0.88
CNTNAP3B-214ENST00000618777 KIAA1211Q6ZU35 1233 aa20.54■□□□□ 0.88
CNTNAP3B-214ENST00000618777 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
CNTNAP3B-214ENST00000618777 PMFBP1Q8TBY8 1022 aa20.54■□□□□ 0.88
CNTNAP3B-214ENST00000618777 MFAP1P55081 439 aaKnown RBP20.54■□□□□ 0.88
CNTNAP3B-214ENST00000618777 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
CNTNAP3B-214ENST00000618777 NOM1Q5C9Z4 860 aaKnown RBP20.51■□□□□ 0.87
CNTNAP3B-214ENST00000618777 IPO8O15397 1037 aaKnown RBP20.51■□□□□ 0.87
CNTNAP3B-214ENST00000618777 GNL2Q13823 731 aaKnown RBP20.51■□□□□ 0.87
CNTNAP3B-214ENST00000618777 RSF1Q96T23 1441 aaPredicted RBP20.51■□□□□ 0.87
CNTNAP3B-214ENST00000618777 HAP1P54257 671 aaPredicted RBP20.49■□□□□ 0.87
CNTNAP3B-214ENST00000618777 DDX49Q9Y6V7 483 aaKnown RBP20.48■□□□□ 0.87
CNTNAP3B-214ENST00000618777 EEA1Q15075 1411 aa20.48■□□□□ 0.87
CNTNAP3B-214ENST00000618777 PDE4AP27815 886 aa20.48■□□□□ 0.87
CNTNAP3B-214ENST00000618777 TPM3P06753 285 aa20.48■□□□□ 0.87
CNTNAP3B-214ENST00000618777 CCDC34Q96HJ3 373 aa20.47■□□□□ 0.87
CNTNAP3B-214ENST00000618777 GOLGA3Q08378 1498 aa20.47■□□□□ 0.87
CNTNAP3B-214ENST00000618777 U2SURPO15042 1029 aaKnown RBP20.44■□□□□ 0.86
CNTNAP3B-214ENST00000618777 R3HCC1Q9Y3T6 440 aaKnown RBP20.44■□□□□ 0.86
CNTNAP3B-214ENST00000618777 SLC4A3P48751 1232 aa20.44■□□□□ 0.86
CNTNAP3B-214ENST00000618777 NFKBIBQ15653 356 aa20.44■□□□□ 0.86
CNTNAP3B-214ENST00000618777 TAF3Q5VWG9 929 aa20.43■□□□□ 0.86
CNTNAP3B-214ENST00000618777 FAM161AQ3B820 660 aa20.42■□□□□ 0.86
CNTNAP3B-214ENST00000618777 TMF1P82094 1093 aa20.41■□□□□ 0.86
CNTNAP3B-214ENST00000618777 ST18O60284 1047 aa20.41■□□□□ 0.86
CNTNAP3B-214ENST00000618777 PDE3BQ13370 1112 aa20.39■□□□□ 0.85
CNTNAP3B-214ENST00000618777 KTN1Q86UP2 1357 aaKnown RBP20.38■□□□□ 0.85
CNTNAP3B-214ENST00000618777 RBM10P98175 930 aaKnown RBP20.38■□□□□ 0.85
CNTNAP3B-214ENST00000618777 FOXD4L1Q9NU39 408 aa20.38■□□□□ 0.85
CNTNAP3B-214ENST00000618777 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
CNTNAP3B-214ENST00000618777 MRE11P49959 708 aa20.38■□□□□ 0.85
CNTNAP3B-214ENST00000618777 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
CNTNAP3B-214ENST00000618777 HSPA5P11021 654 aaKnown RBP20.37■□□□□ 0.85
CNTNAP3B-214ENST00000618777 KIF16BQ96L93 1317 aa20.37■□□□□ 0.85
CNTNAP3B-214ENST00000618777 C14orf37Q86TY3 774 aa20.37■□□□□ 0.85
CNTNAP3B-214ENST00000618777 ITPRIPQ8IWB1 547 aa20.36■□□□□ 0.85
CNTNAP3B-214ENST00000618777 RALBP1Q15311 655 aa20.36■□□□□ 0.85
CNTNAP3B-214ENST00000618777 CCAR2Q8N163 923 aaKnown RBP20.35■□□□□ 0.85
CNTNAP3B-214ENST00000618777 CWC15Q9P013 229 aaKnown RBP20.35■□□□□ 0.85
CNTNAP3B-214ENST00000618777 CENPQQ7L2Z9 268 aaPredicted RBP20.34■□□□□ 0.85
CNTNAP3B-214ENST00000618777 GOLGA6L19H0YKK7 550 aa20.34■□□□□ 0.85
CNTNAP3B-214ENST00000618777 A0A0G2JS52 829 aa20.34■□□□□ 0.85
CNTNAP3B-214ENST00000618777 CCDC70Q6NSX1 233 aa20.34■□□□□ 0.85
CNTNAP3B-214ENST00000618777 APBB1O00213 710 aa20.33■□□□□ 0.85
CNTNAP3B-214ENST00000618777 ZNF592Q92610 1267 aa20.32■□□□□ 0.84
CNTNAP3B-214ENST00000618777 ATP6V1DQ9Y5K8 247 aa20.32■□□□□ 0.84
CNTNAP3B-214ENST00000618777 BBXQ8WY36 941 aaPredicted RBP20.32■□□□□ 0.84
CNTNAP3B-214ENST00000618777 ARGLU1Q9NWB6 273 aaPredicted RBP20.31■□□□□ 0.84
CNTNAP3B-214ENST00000618777 DIAPH3Q9NSV4 1193 aa20.31■□□□□ 0.84
CNTNAP3B-214ENST00000618777 CLSTN1O94985 981 aa20.3■□□□□ 0.84
CNTNAP3B-214ENST00000618777 HSP90B1P14625 803 aaKnown RBP20.3■□□□□ 0.84
CNTNAP3B-214ENST00000618777 CHMP5Q9NZZ3 219 aa20.3■□□□□ 0.84
CNTNAP3B-214ENST00000618777 BECN2A8MW95 431 aa20.29■□□□□ 0.84
CNTNAP3B-214ENST00000618777 PPP1R15AO75807 674 aaPredicted RBP20.29■□□□□ 0.84
CNTNAP3B-214ENST00000618777 PDIA4P13667 645 aaKnown RBP20.29■□□□□ 0.84
CNTNAP3B-214ENST00000618777 GOLGA2Q08379 1002 aa20.29■□□□□ 0.84
CNTNAP3B-214ENST00000618777 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
CNTNAP3B-214ENST00000618777 MAPK8IP2Q13387 824 aaPredicted RBP20.27■□□□□ 0.84
CNTNAP3B-214ENST00000618777 KIF3AQ9Y496 699 aa20.27■□□□□ 0.84
CNTNAP3B-214ENST00000618777 PATL2C9JE40 543 aaKnown RBP20.26■□□□□ 0.83
CNTNAP3B-214ENST00000618777 MORC1Q86VD1 984 aa20.26■□□□□ 0.83
CNTNAP3B-214ENST00000618777 NPM1P06748 294 aaKnown RBP eCLIP20.26■□□□□ 0.83
CNTNAP3B-214ENST00000618777 PDCL3Q9H2J4 239 aa20.26■□□□□ 0.83
CNTNAP3B-214ENST00000618777 ACBD3Q9H3P7 528 aa20.25■□□□□ 0.83
CNTNAP3B-214ENST00000618777 HMGN5P82970 282 aaKnown RBP20.24■□□□□ 0.83
CNTNAP3B-214ENST00000618777 PLEKHG5O94827 1062 aa20.23■□□□□ 0.83
CNTNAP3B-214ENST00000618777 TSR1Q2NL82 804 aaKnown RBP20.23■□□□□ 0.83
CNTNAP3B-214ENST00000618777 HMMRO75330 724 aa20.23■□□□□ 0.83
CNTNAP3B-214ENST00000618777 FOXD4L5Q5VV16 416 aaPredicted RBP20.23■□□□□ 0.83
CNTNAP3B-214ENST00000618777 FOXD4L4Q8WXT5 416 aaPredicted RBP20.23■□□□□ 0.83
CNTNAP3B-214ENST00000618777 AEBP1Q8IUX7 1158 aa20.23■□□□□ 0.83
CNTNAP3B-214ENST00000618777 PAK3O75914 559 aaPredicted RBP20.22■□□□□ 0.83
CNTNAP3B-214ENST00000618777 TPM1P09493 284 aa20.22■□□□□ 0.83
CNTNAP3B-214ENST00000618777 SF3A1Q15459 793 aaKnown RBP20.22■□□□□ 0.83
CNTNAP3B-214ENST00000618777 NOL8Q76FK4 1167 aaKnown RBP20.22■□□□□ 0.83
CNTNAP3B-214ENST00000618777 RRP12Q5JTH9 1297 aaKnown RBP20.21■□□□□ 0.83
CNTNAP3B-214ENST00000618777 CEP89Q96ST8 783 aa20.21■□□□□ 0.83
CNTNAP3B-214ENST00000618777 RDXP35241 583 aaKnown RBP20.2■□□□□ 0.82
CNTNAP3B-214ENST00000618777 HSP90B2PQ58FF3 399 aa20.2■□□□□ 0.82
CNTNAP3B-214ENST00000618777 CCDC39Q9UFE4 941 aa20.2■□□□□ 0.82
CNTNAP3B-214ENST00000618777 TRIM6-TRIM34B2RNG4 842 aa20.2■□□□□ 0.82
CNTNAP3B-214ENST00000618777 TSPYL1Q9H0U9 437 aa20.2■□□□□ 0.82
CNTNAP3B-214ENST00000618777 HOMER1Q86YM7 354 aa20.2■□□□□ 0.82
CNTNAP3B-214ENST00000618777 CENPJQ9HC77 1338 aaPredicted RBP20.19■□□□□ 0.82
CNTNAP3B-214ENST00000618777 SMC4Q9NTJ3 1288 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms