RNA–Protein interactions for RNA: ENST00000618626.1

SLC46A1-208, Transcript of solute carrier family 46 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC46A1, Length 5,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-208ENST00000618626 MORC1Q86VD1 984 aa17.61■□□□□ 0.41
SLC46A1-208ENST00000618626 DHX57Q6P158 1386 aaKnown RBP17.61■□□□□ 0.41
SLC46A1-208ENST00000618626 L3MBTL2Q969R5 705 aa17.59■□□□□ 0.41
SLC46A1-208ENST00000618626 ARXQ96QS3 562 aa17.59■□□□□ 0.41
SLC46A1-208ENST00000618626 NCLP19338 710 aaKnown RBP17.59■□□□□ 0.41
SLC46A1-208ENST00000618626 RGS3P49796 1198 aa17.58■□□□□ 0.41
SLC46A1-208ENST00000618626 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.4
SLC46A1-208ENST00000618626 GGT6Q6P531 493 aa17.57■□□□□ 0.4
SLC46A1-208ENST00000618626 PLEKHG5O94827 1062 aa17.56■□□□□ 0.4
SLC46A1-208ENST00000618626 JPH4Q96JJ6 628 aa17.56■□□□□ 0.4
SLC46A1-208ENST00000618626 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
SLC46A1-208ENST00000618626 EIF3AQ14152 1382 aaKnown RBP17.55■□□□□ 0.4
SLC46A1-208ENST00000618626 HNRNPMP52272 730 aaKnown RBP eCLIP17.53■□□□□ 0.4
SLC46A1-208ENST00000618626 HAP1P54257 671 aaPredicted RBP17.51■□□□□ 0.39
SLC46A1-208ENST00000618626 IGF1RP08069 1367 aa17.51■□□□□ 0.39
SLC46A1-208ENST00000618626 HDGFL2Q7Z4V5 671 aaPredicted RBP17.51■□□□□ 0.39
SLC46A1-208ENST00000618626 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
SLC46A1-208ENST00000618626 A0A0G2JS52 829 aa17.5■□□□□ 0.39
SLC46A1-208ENST00000618626 TRIM44Q96DX7 344 aaPredicted RBP17.49■□□□□ 0.39
SLC46A1-208ENST00000618626 SPAG9O60271 1321 aaKnown RBP17.49■□□□□ 0.39
SLC46A1-208ENST00000618626 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
SLC46A1-208ENST00000618626 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
SLC46A1-208ENST00000618626 KIF3BO15066 747 aa17.48■□□□□ 0.39
SLC46A1-208ENST00000618626 MLECQ14165 292 aa17.47■□□□□ 0.39
SLC46A1-208ENST00000618626 SAFB2Q14151 953 aaKnown RBP eCLIP17.46■□□□□ 0.39
SLC46A1-208ENST00000618626 GLIPR1L2Q4G1C9 344 aa17.46■□□□□ 0.39
SLC46A1-208ENST00000618626 NLRP13Q86W25 1043 aa17.45■□□□□ 0.38
SLC46A1-208ENST00000618626 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
SLC46A1-208ENST00000618626 LMOD2Q6P5Q4 547 aa17.44■□□□□ 0.38
SLC46A1-208ENST00000618626 STK26Q9P289 416 aa17.44■□□□□ 0.38
SLC46A1-208ENST00000618626 IPO8O15397 1037 aaKnown RBP17.43■□□□□ 0.38
SLC46A1-208ENST00000618626 PDE3BQ13370 1112 aa17.43■□□□□ 0.38
SLC46A1-208ENST00000618626 RBM19Q9Y4C8 960 aaKnown RBP17.43■□□□□ 0.38
SLC46A1-208ENST00000618626 PHLDB1Q86UU1 1377 aa17.43■□□□□ 0.38
SLC46A1-208ENST00000618626 CALD1Q05682 793 aaKnown RBP17.43■□□□□ 0.38
SLC46A1-208ENST00000618626 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
SLC46A1-208ENST00000618626 KIF21BO75037 1637 aa17.41■□□□□ 0.38
SLC46A1-208ENST00000618626 CCDC144AA2RUR9 1427 aa17.41■□□□□ 0.38
SLC46A1-208ENST00000618626 KIF15Q9NS87 1388 aa17.41■□□□□ 0.38
SLC46A1-208ENST00000618626 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
SLC46A1-208ENST00000618626 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.38
SLC46A1-208ENST00000618626 PTPRGP23470 1445 aa17.4■□□□□ 0.38
SLC46A1-208ENST00000618626 CUX1P39880 1505 aa17.39■□□□□ 0.37
SLC46A1-208ENST00000618626 HSP90AB1P08238 724 aaKnown RBP17.39■□□□□ 0.37
SLC46A1-208ENST00000618626 TCERG1O14776 1098 aaKnown RBP17.39■□□□□ 0.37
SLC46A1-208ENST00000618626 OS9Q13438 667 aaPredicted RBP17.38■□□□□ 0.37
SLC46A1-208ENST00000618626 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
SLC46A1-208ENST00000618626 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
SLC46A1-208ENST00000618626 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
SLC46A1-208ENST00000618626 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
SLC46A1-208ENST00000618626 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
SLC46A1-208ENST00000618626 FGD6Q6ZV73 1430 aa17.36■□□□□ 0.37
SLC46A1-208ENST00000618626 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
SLC46A1-208ENST00000618626 HSCBQ8IWL3 235 aa17.36■□□□□ 0.37
SLC46A1-208ENST00000618626 UACAQ9BZF9 1416 aa17.36■□□□□ 0.37
SLC46A1-208ENST00000618626 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
SLC46A1-208ENST00000618626 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
SLC46A1-208ENST00000618626 RWDD1Q9H446 243 aaPredicted RBP17.34■□□□□ 0.37
SLC46A1-208ENST00000618626 ST20-MTHFSA0A0A6YYL1 179 aa17.34■□□□□ 0.37
SLC46A1-208ENST00000618626 ZRSR1Q15695 479 aaKnown RBP17.34■□□□□ 0.37
SLC46A1-208ENST00000618626 LRRC9Q6ZRR7 1453 aa17.33■□□□□ 0.37
SLC46A1-208ENST00000618626 SOX12O15370 315 aa17.33■□□□□ 0.36
SLC46A1-208ENST00000618626 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
SLC46A1-208ENST00000618626 PTMAP06454 111 aaKnown RBP17.31■□□□□ 0.36
SLC46A1-208ENST00000618626 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
SLC46A1-208ENST00000618626 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
SLC46A1-208ENST00000618626 USP47Q96K76 1375 aa17.3■□□□□ 0.36
SLC46A1-208ENST00000618626 MCCP23508 829 aa17.3■□□□□ 0.36
SLC46A1-208ENST00000618626 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
SLC46A1-208ENST00000618626 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
SLC46A1-208ENST00000618626 KCNJ4P48050 445 aa17.28■□□□□ 0.36
SLC46A1-208ENST00000618626 CFTRP13569 1480 aa17.28■□□□□ 0.36
SLC46A1-208ENST00000618626 PANK3Q9H999 370 aa17.27■□□□□ 0.35
SLC46A1-208ENST00000618626 FYCO1Q9BQS8 1478 aa17.26■□□□□ 0.35
SLC46A1-208ENST00000618626 ITPRIPQ8IWB1 547 aa17.26■□□□□ 0.35
SLC46A1-208ENST00000618626 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
SLC46A1-208ENST00000618626 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
SLC46A1-208ENST00000618626 ZBED9Q6R2W3 1325 aa17.25■□□□□ 0.35
SLC46A1-208ENST00000618626 FGD1P98174 961 aa17.25■□□□□ 0.35
SLC46A1-208ENST00000618626 CENPJQ9HC77 1338 aaPredicted RBP17.24■□□□□ 0.35
SLC46A1-208ENST00000618626 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
SLC46A1-208ENST00000618626 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
SLC46A1-208ENST00000618626 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
SLC46A1-208ENST00000618626 NCOA2Q15596 1464 aa17.22■□□□□ 0.35
SLC46A1-208ENST00000618626 CCDC146Q8IYE0 955 aa17.22■□□□□ 0.35
SLC46A1-208ENST00000618626 VGFO15240 615 aaPredicted RBP17.22■□□□□ 0.35
SLC46A1-208ENST00000618626 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
SLC46A1-208ENST00000618626 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
SLC46A1-208ENST00000618626 STAC3Q96MF2 364 aa17.22■□□□□ 0.35
SLC46A1-208ENST00000618626 EID1Q9Y6B2 187 aa17.21■□□□□ 0.35
SLC46A1-208ENST00000618626 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
SLC46A1-208ENST00000618626 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
SLC46A1-208ENST00000618626 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
SLC46A1-208ENST00000618626 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
SLC46A1-208ENST00000618626 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
SLC46A1-208ENST00000618626 STK31Q9BXU1 1019 aa17.19■□□□□ 0.34
SLC46A1-208ENST00000618626 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
SLC46A1-208ENST00000618626 EFCAB5A4FU69 1503 aa17.18■□□□□ 0.34
SLC46A1-208ENST00000618626 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
SLC46A1-208ENST00000618626 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms