RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 NOC3LQ8WTT2 800 aaKnown RBP14.17□□□□□ -0.14
CCDC144B-208ENST00000618081 SOX12O15370 315 aa14.16□□□□□ -0.14
CCDC144B-208ENST00000618081 PTMSP20962 102 aa14.16□□□□□ -0.14
CCDC144B-208ENST00000618081 IPO8O15397 1037 aaKnown RBP14.15□□□□□ -0.14
CCDC144B-208ENST00000618081 MORC1Q86VD1 984 aa14.15□□□□□ -0.14
CCDC144B-208ENST00000618081 NOP58Q9Y2X3 529 aaKnown RBP14.14□□□□□ -0.15
CCDC144B-208ENST00000618081 SENP3-EIF4A1A0A087X0R7 540 aa14.14□□□□□ -0.15
CCDC144B-208ENST00000618081 HDGFL2Q7Z4V5 671 aaPredicted RBP14.14□□□□□ -0.15
CCDC144B-208ENST00000618081 GPATCH3Q96I76 525 aa14.14□□□□□ -0.15
CCDC144B-208ENST00000618081 HTATSF1O43719 755 aaKnown RBP14.14□□□□□ -0.15
CCDC144B-208ENST00000618081 DCAF11Q8TEB1 546 aa14.14□□□□□ -0.15
CCDC144B-208ENST00000618081 CCDC34Q96HJ3 373 aa14.13□□□□□ -0.15
CCDC144B-208ENST00000618081 MLECQ14165 292 aa14.13□□□□□ -0.15
CCDC144B-208ENST00000618081 PAK3O75914 559 aaPredicted RBP14.12□□□□□ -0.15
CCDC144B-208ENST00000618081 BAZ1AQ9NRL2 1556 aaPredicted RBP14.12□□□□□ -0.15
CCDC144B-208ENST00000618081 SPAG9O60271 1321 aaKnown RBP14.1□□□□□ -0.15
CCDC144B-208ENST00000618081 ARHGAP35Q9NRY4 1499 aa14.1□□□□□ -0.15
CCDC144B-208ENST00000618081 EIF3AQ14152 1382 aaKnown RBP14.1□□□□□ -0.15
CCDC144B-208ENST00000618081 TPM4P67936 248 aa14.1□□□□□ -0.15
CCDC144B-208ENST00000618081 PRM3Q9NNZ6 103 aa14.1□□□□□ -0.15
CCDC144B-208ENST00000618081 CSB-PGBD3P0DP91 1061 aa14.08□□□□□ -0.15
CCDC144B-208ENST00000618081 HDAC5Q9UQL6 1122 aa14.08□□□□□ -0.15
CCDC144B-208ENST00000618081 KTN1Q86UP2 1357 aaKnown RBP14.08□□□□□ -0.15
CCDC144B-208ENST00000618081 SYAP1Q96A49 352 aaPredicted RBP14.08□□□□□ -0.16
CCDC144B-208ENST00000618081 G3V3G9 751 aa14.08□□□□□ -0.16
CCDC144B-208ENST00000618081 DCAF8Q5TAQ9 597 aa14.08□□□□□ -0.16
CCDC144B-208ENST00000618081 GORABQ5T7V8 394 aa14.07□□□□□ -0.16
CCDC144B-208ENST00000618081 GBP4Q96PP9 640 aa14.06□□□□□ -0.16
CCDC144B-208ENST00000618081 TAF7LQ5H9L4 462 aa14.06□□□□□ -0.16
CCDC144B-208ENST00000618081 TNIKQ9UKE5 1360 aa14.06□□□□□ -0.16
CCDC144B-208ENST00000618081 SAFB2Q14151 953 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCDC144B-208ENST00000618081 ZNF330Q9Y3S2 320 aaPredicted RBP14.06□□□□□ -0.16
CCDC144B-208ENST00000618081 CARMIL2Q6F5E8 1435 aa14.05□□□□□ -0.16
CCDC144B-208ENST00000618081 KAT6BQ8WYB5 2073 aa14.05□□□□□ -0.16
CCDC144B-208ENST00000618081 STK26Q9P289 416 aa14.04□□□□□ -0.16
CCDC144B-208ENST00000618081 ROCK2O75116 1388 aaKnown RBP14.04□□□□□ -0.16
CCDC144B-208ENST00000618081 USP35Q9P2H5 1018 aa14.03□□□□□ -0.16
CCDC144B-208ENST00000618081 CHMP3Q9Y3E7 222 aa14.03□□□□□ -0.16
CCDC144B-208ENST00000618081 CSPP1Q1MSJ5 1256 aa14.03□□□□□ -0.16
CCDC144B-208ENST00000618081 STK31Q9BXU1 1019 aa14.02□□□□□ -0.17
CCDC144B-208ENST00000618081 CCDC9Q9Y3X0 531 aaKnown RBP14.01□□□□□ -0.17
CCDC144B-208ENST00000618081 A0A0U1RQG5 324 aaPredicted RBP14.01□□□□□ -0.17
CCDC144B-208ENST00000618081 APBB1O00213 710 aa14.01□□□□□ -0.17
CCDC144B-208ENST00000618081 SPRYD3Q8NCJ5 442 aa14.01□□□□□ -0.17
CCDC144B-208ENST00000618081 HSP90B1P14625 803 aaKnown RBP14□□□□□ -0.17
CCDC144B-208ENST00000618081 GGT6Q6P531 493 aa14□□□□□ -0.17
CCDC144B-208ENST00000618081 ITPRIPQ8IWB1 547 aa14□□□□□ -0.17
CCDC144B-208ENST00000618081 GOLGA6L1Q8N7Z2 621 aa13.99□□□□□ -0.17
CCDC144B-208ENST00000618081 B4GALNT3Q6L9W6 998 aa13.99□□□□□ -0.17
CCDC144B-208ENST00000618081 RASSF8Q8NHQ8 419 aa13.99□□□□□ -0.17
CCDC144B-208ENST00000618081 CUX2O14529 1486 aa13.99□□□□□ -0.17
CCDC144B-208ENST00000618081 RWDD1Q9H446 243 aaPredicted RBP13.99□□□□□ -0.17
CCDC144B-208ENST00000618081 EID1Q9Y6B2 187 aa13.98□□□□□ -0.17
CCDC144B-208ENST00000618081 HMMRO75330 724 aa13.98□□□□□ -0.17
CCDC144B-208ENST00000618081 CEP89Q96ST8 783 aa13.98□□□□□ -0.17
CCDC144B-208ENST00000618081 U2AF1L5P0DN76 240 aaPredicted RBP13.97□□□□□ -0.17
CCDC144B-208ENST00000618081 U2AF1Q01081 240 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC144B-208ENST00000618081 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
CCDC144B-208ENST00000618081 TRIM6-TRIM34B2RNG4 842 aa13.97□□□□□ -0.17
CCDC144B-208ENST00000618081 RTN4Q9NQC3 1192 aaKnown RBP13.97□□□□□ -0.17
CCDC144B-208ENST00000618081 PHF14O94880 888 aa13.96□□□□□ -0.17
CCDC144B-208ENST00000618081 PMFBP1Q8TBY8 1022 aa13.96□□□□□ -0.17
CCDC144B-208ENST00000618081 TERF2IPQ9NYB0 399 aa13.96□□□□□ -0.18
CCDC144B-208ENST00000618081 TIMELESSQ9UNS1 1208 aa13.96□□□□□ -0.18
CCDC144B-208ENST00000618081 SETD5Q9C0A6 1442 aa13.96□□□□□ -0.18
CCDC144B-208ENST00000618081 CARMIL1Q5VZK9 1371 aa13.95□□□□□ -0.18
CCDC144B-208ENST00000618081 KIF3AQ9Y496 699 aa13.95□□□□□ -0.18
CCDC144B-208ENST00000618081 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
CCDC144B-208ENST00000618081 SMARCA2P51531 1590 aa13.95□□□□□ -0.18
CCDC144B-208ENST00000618081 RALBP1Q15311 655 aa13.94□□□□□ -0.18
CCDC144B-208ENST00000618081 LMOD3Q0VAK6 560 aa13.94□□□□□ -0.18
CCDC144B-208ENST00000618081 FRAT2O75474 233 aaPredicted RBP13.94□□□□□ -0.18
CCDC144B-208ENST00000618081 VPS53Q5VIR6 699 aa13.93□□□□□ -0.18
CCDC144B-208ENST00000618081 GTF2E1P29083 439 aaPredicted RBP13.92□□□□□ -0.18
CCDC144B-208ENST00000618081 CCER2I3L3R5 266 aa13.92□□□□□ -0.18
CCDC144B-208ENST00000618081 FMN1Q68DA7 1419 aa13.91□□□□□ -0.18
CCDC144B-208ENST00000618081 MARCH6O60337 910 aa13.91□□□□□ -0.18
CCDC144B-208ENST00000618081 ANKRD30AQ9BXX3 1397 aa13.9□□□□□ -0.18
CCDC144B-208ENST00000618081 RCAN3Q9UKA8 241 aa13.9□□□□□ -0.18
CCDC144B-208ENST00000618081 KIF16BQ96L93 1317 aa13.9□□□□□ -0.18
CCDC144B-208ENST00000618081 SMC4Q9NTJ3 1288 aa13.9□□□□□ -0.18
CCDC144B-208ENST00000618081 PKD2Q13563 968 aa13.89□□□□□ -0.19
CCDC144B-208ENST00000618081 TPM3P06753 285 aa13.89□□□□□ -0.19
CCDC144B-208ENST00000618081 NGDNQ8NEJ9 315 aaKnown RBP13.89□□□□□ -0.19
CCDC144B-208ENST00000618081 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
CCDC144B-208ENST00000618081 CREBRFQ8IUR6 639 aa13.89□□□□□ -0.19
CCDC144B-208ENST00000618081 AMPHP49418 695 aa13.89□□□□□ -0.19
CCDC144B-208ENST00000618081 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
CCDC144B-208ENST00000618081 MYO15BQ96JP2 1530 aa13.88□□□□□ -0.19
CCDC144B-208ENST00000618081 TSR1Q2NL82 804 aaKnown RBP13.88□□□□□ -0.19
CCDC144B-208ENST00000618081 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
CCDC144B-208ENST00000618081 ST18O60284 1047 aa13.87□□□□□ -0.19
CCDC144B-208ENST00000618081 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
CCDC144B-208ENST00000618081 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
CCDC144B-208ENST00000618081 NUP155O75694 1391 aa13.87□□□□□ -0.19
CCDC144B-208ENST00000618081 LRRFIP1Q32MZ4 808 aaKnown RBP13.87□□□□□ -0.19
CCDC144B-208ENST00000618081 EFCAB2Q5VUJ9 269 aa13.86□□□□□ -0.19
CCDC144B-208ENST00000618081 PHLDB1Q86UU1 1377 aa13.86□□□□□ -0.19
CCDC144B-208ENST00000618081 SLC4A10Q6U841 1118 aa13.86□□□□□ -0.19
CCDC144B-208ENST00000618081 PDE4CQ08493 712 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms