RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 UHRF1BP1LA0JNW5 1464 aa13.07□□□□□ -0.32
CNTNAP3B-213ENST00000617848 ABCC2Q92887 1545 aa13.07□□□□□ -0.32
CNTNAP3B-213ENST00000617848 MIA2Q96PC5 1412 aa13.06□□□□□ -0.32
CNTNAP3B-213ENST00000617848 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
CNTNAP3B-213ENST00000617848 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
CNTNAP3B-213ENST00000617848 ADCY10Q96PN6 1610 aa13.01□□□□□ -0.33
CNTNAP3B-213ENST00000617848 PTPN23Q9H3S7 1636 aa13.01□□□□□ -0.33
CNTNAP3B-213ENST00000617848 CFDP1Q9UEE9 299 aaPredicted RBP13□□□□□ -0.33
CNTNAP3B-213ENST00000617848 KDM5BQ9UGL1 1544 aa12.99□□□□□ -0.33
CNTNAP3B-213ENST00000617848 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
CNTNAP3B-213ENST00000617848 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
CNTNAP3B-213ENST00000617848 ABCC10Q5T3U5 1492 aa12.98□□□□□ -0.33
CNTNAP3B-213ENST00000617848 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
CNTNAP3B-213ENST00000617848 KIF14Q15058 1648 aa12.97□□□□□ -0.33
CNTNAP3B-213ENST00000617848 PTPRKQ15262 1439 aa12.96□□□□□ -0.34
CNTNAP3B-213ENST00000617848 NPM1P06748 294 aaKnown RBP eCLIP12.95□□□□□ -0.34
CNTNAP3B-213ENST00000617848 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
CNTNAP3B-213ENST00000617848 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
CNTNAP3B-213ENST00000617848 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
CNTNAP3B-213ENST00000617848 ZNF777Q9ULD5 760 aaPredicted RBP12.94□□□□□ -0.34
CNTNAP3B-213ENST00000617848 ZCCHC11Q5TAX3 1644 aaKnown RBP12.94□□□□□ -0.34
CNTNAP3B-213ENST00000617848 ITSN2Q9NZM3 1697 aa12.93□□□□□ -0.34
CNTNAP3B-213ENST00000617848 DHX57Q6P158 1386 aaKnown RBP12.92□□□□□ -0.34
CNTNAP3B-213ENST00000617848 CHIC2Q9UKJ5 165 aa12.91□□□□□ -0.34
CNTNAP3B-213ENST00000617848 CLSPNQ9HAW4 1339 aa12.9□□□□□ -0.34
CNTNAP3B-213ENST00000617848 HFM1A2PYH4 1435 aa12.9□□□□□ -0.34
CNTNAP3B-213ENST00000617848 ABCC5O15440 1437 aa12.9□□□□□ -0.34
CNTNAP3B-213ENST00000617848 DAPK1P53355 1430 aa12.9□□□□□ -0.34
CNTNAP3B-213ENST00000617848 CAPN15O75808 1086 aa12.9□□□□□ -0.34
CNTNAP3B-213ENST00000617848 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
CNTNAP3B-213ENST00000617848 RRP7BPQ9NSQ0 103 aa12.89□□□□□ -0.35
CNTNAP3B-213ENST00000617848 AKNAQ7Z591 1439 aa12.88□□□□□ -0.35
CNTNAP3B-213ENST00000617848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.88□□□□□ -0.35
CNTNAP3B-213ENST00000617848 RSPH4AQ5TD94 716 aa12.88□□□□□ -0.35
CNTNAP3B-213ENST00000617848 ROCK1Q13464 1354 aa12.88□□□□□ -0.35
CNTNAP3B-213ENST00000617848 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
CNTNAP3B-213ENST00000617848 NAIPQ13075 1403 aa12.88□□□□□ -0.35
CNTNAP3B-213ENST00000617848 WDR7Q9Y4E6 1490 aa12.87□□□□□ -0.35
CNTNAP3B-213ENST00000617848 DNMT1P26358 1616 aaKnown RBP12.87□□□□□ -0.35
CNTNAP3B-213ENST00000617848 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
CNTNAP3B-213ENST00000617848 EFCAB2Q5VUJ9 269 aa12.86□□□□□ -0.35
CNTNAP3B-213ENST00000617848 PLCH2O75038 1416 aa12.86□□□□□ -0.35
CNTNAP3B-213ENST00000617848 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
CNTNAP3B-213ENST00000617848 ASXL2Q76L83 1435 aa12.85□□□□□ -0.35
CNTNAP3B-213ENST00000617848 TSPY4P0CV99 314 aa12.84□□□□□ -0.35
CNTNAP3B-213ENST00000617848 TSPY10P0CW01 314 aa12.84□□□□□ -0.35
CNTNAP3B-213ENST00000617848 HNRNPMP52272 730 aaKnown RBP eCLIP12.84□□□□□ -0.35
CNTNAP3B-213ENST00000617848 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
CNTNAP3B-213ENST00000617848 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
CNTNAP3B-213ENST00000617848 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
CNTNAP3B-213ENST00000617848 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
CNTNAP3B-213ENST00000617848 ARHGAP5Q13017 1502 aa12.83□□□□□ -0.36
CNTNAP3B-213ENST00000617848 PLEKHH2Q8IVE3 1493 aa12.82□□□□□ -0.36
CNTNAP3B-213ENST00000617848 CDC42BPBQ9Y5S2 1711 aa12.82□□□□□ -0.36
CNTNAP3B-213ENST00000617848 KIAA1107Q9UPP5 1409 aa12.81□□□□□ -0.36
CNTNAP3B-213ENST00000617848 MBD5Q9P267 1494 aa12.81□□□□□ -0.36
CNTNAP3B-213ENST00000617848 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
CNTNAP3B-213ENST00000617848 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
CNTNAP3B-213ENST00000617848 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
CNTNAP3B-213ENST00000617848 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
CNTNAP3B-213ENST00000617848 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
CNTNAP3B-213ENST00000617848 NCOA1Q15788 1441 aa12.8□□□□□ -0.36
CNTNAP3B-213ENST00000617848 ADGRL2O95490 1459 aa12.8□□□□□ -0.36
CNTNAP3B-213ENST00000617848 MYO5CQ9NQX4 1742 aa12.8□□□□□ -0.36
CNTNAP3B-213ENST00000617848 ARHGEF5Q12774 1597 aa12.8□□□□□ -0.36
CNTNAP3B-213ENST00000617848 SHANK2Q9UPX8 1470 aa12.79□□□□□ -0.36
CNTNAP3B-213ENST00000617848 ARAP3Q8WWN8 1544 aa12.79□□□□□ -0.36
CNTNAP3B-213ENST00000617848 SAMD9LQ8IVG5 1584 aa12.79□□□□□ -0.36
CNTNAP3B-213ENST00000617848 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
CNTNAP3B-213ENST00000617848 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
CNTNAP3B-213ENST00000617848 C9orf84Q5VXU9 1444 aa12.78□□□□□ -0.36
CNTNAP3B-213ENST00000617848 CCDC141Q6ZP82 1450 aa12.78□□□□□ -0.36
CNTNAP3B-213ENST00000617848 ABCA9Q8IUA7 1624 aa12.77□□□□□ -0.37
CNTNAP3B-213ENST00000617848 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
CNTNAP3B-213ENST00000617848 CROCC2H7BZ55 1655 aa12.75□□□□□ -0.37
CNTNAP3B-213ENST00000617848 ADGBQ8N7X0 1667 aa12.74□□□□□ -0.37
CNTNAP3B-213ENST00000617848 FOXD4L1Q9NU39 408 aa12.74□□□□□ -0.37
CNTNAP3B-213ENST00000617848 MAPKBP1O60336 1514 aa12.73□□□□□ -0.37
CNTNAP3B-213ENST00000617848 SYCP2Q9BX26 1530 aa12.73□□□□□ -0.37
CNTNAP3B-213ENST00000617848 DSG3P32926 999 aa12.73□□□□□ -0.37
CNTNAP3B-213ENST00000617848 ARHGEF12Q9NZN5 1544 aa12.72□□□□□ -0.37
CNTNAP3B-213ENST00000617848 CD109Q6YHK3 1445 aa12.72□□□□□ -0.37
CNTNAP3B-213ENST00000617848 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
CNTNAP3B-213ENST00000617848 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
CNTNAP3B-213ENST00000617848 KDM6BO15054 1643 aa12.72□□□□□ -0.37
CNTNAP3B-213ENST00000617848 MAST1Q9Y2H9 1570 aa12.72□□□□□ -0.37
CNTNAP3B-213ENST00000617848 FANCAO15360 1455 aa12.72□□□□□ -0.37
CNTNAP3B-213ENST00000617848 ANKRD50Q9ULJ7 1429 aa12.71□□□□□ -0.37
CNTNAP3B-213ENST00000617848 TIMELESSQ9UNS1 1208 aa12.71□□□□□ -0.37
CNTNAP3B-213ENST00000617848 KIF15Q9NS87 1388 aa12.7□□□□□ -0.38
CNTNAP3B-213ENST00000617848 SIN3AQ96ST3 1273 aa12.7□□□□□ -0.38
CNTNAP3B-213ENST00000617848 ABCC1P33527 1531 aa12.7□□□□□ -0.38
CNTNAP3B-213ENST00000617848 TRAPPC8Q9Y2L5 1435 aa12.7□□□□□ -0.38
CNTNAP3B-213ENST00000617848 RTEL1-TNFRSF6BF6WH68 1400 aa12.69□□□□□ -0.38
CNTNAP3B-213ENST00000617848 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
CNTNAP3B-213ENST00000617848 SPAG9O60271 1321 aaKnown RBP12.68□□□□□ -0.38
CNTNAP3B-213ENST00000617848 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
CNTNAP3B-213ENST00000617848 AFAP1Q8N556 730 aa12.68□□□□□ -0.38
CNTNAP3B-213ENST00000617848 ADGRL1O94910 1474 aa12.67□□□□□ -0.38
CNTNAP3B-213ENST00000617848 GLI2P10070 1586 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms