RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 NCBP3Q53F19 620 aaKnown RBP9.56□□□□□ -0.88
PDE6A-205ENST00000617647 SPRYD3Q8NCJ5 442 aa9.55□□□□□ -0.88
PDE6A-205ENST00000617647 MAPK8IP2Q13387 824 aaPredicted RBP9.55□□□□□ -0.88
PDE6A-205ENST00000617647 PLCD3Q8N3E9 789 aa9.55□□□□□ -0.88
PDE6A-205ENST00000617647 TMC1Q8TDI8 760 aa9.54□□□□□ -0.88
PDE6A-205ENST00000617647 POGKQ9P215 609 aa9.54□□□□□ -0.88
PDE6A-205ENST00000617647 NUDCQ9Y266 331 aa9.54□□□□□ -0.88
PDE6A-205ENST00000617647 MAP7D2Q96T17 732 aa9.54□□□□□ -0.88
PDE6A-205ENST00000617647 KIAA1211Q6ZU35 1233 aa9.53□□□□□ -0.88
PDE6A-205ENST00000617647 PABPN1Q86U42 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDE6A-205ENST00000617647 BACH2Q9BYV9 841 aa9.53□□□□□ -0.88
PDE6A-205ENST00000617647 ZBTB7CA1YPR0 619 aa9.53□□□□□ -0.88
PDE6A-205ENST00000617647 MS4A1P11836 297 aa9.53□□□□□ -0.88
PDE6A-205ENST00000617647 CLCN1P35523 988 aa9.52□□□□□ -0.89
PDE6A-205ENST00000617647 ZBED9Q6R2W3 1325 aa9.52□□□□□ -0.89
PDE6A-205ENST00000617647 EXOC6Q8TAG9 804 aa9.52□□□□□ -0.89
PDE6A-205ENST00000617647 ESPNB1AK53 854 aa9.52□□□□□ -0.89
PDE6A-205ENST00000617647 CLIP1P30622 1438 aa9.51□□□□□ -0.89
PDE6A-205ENST00000617647 R3HCC1Q9Y3T6 440 aaKnown RBP9.5□□□□□ -0.89
PDE6A-205ENST00000617647 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
PDE6A-205ENST00000617647 BICRAQ9NZM4 1560 aa9.49□□□□□ -0.89
PDE6A-205ENST00000617647 SOGA1O94964 1423 aa9.49□□□□□ -0.89
PDE6A-205ENST00000617647 EIF4G2P78344 907 aaKnown RBP eCLIP9.48□□□□□ -0.89
PDE6A-205ENST00000617647 GOLGA3Q08378 1498 aa9.48□□□□□ -0.89
PDE6A-205ENST00000617647 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.48□□□□□ -0.89
PDE6A-205ENST00000617647 AKNAQ7Z591 1439 aa9.47□□□□□ -0.89
PDE6A-205ENST00000617647 PTMAP06454 111 aaKnown RBP9.47□□□□□ -0.89
PDE6A-205ENST00000617647 VGLL3A8MV65 326 aa9.47□□□□□ -0.89
PDE6A-205ENST00000617647 DNAJC5BQ9UF47 199 aa9.47□□□□□ -0.89
PDE6A-205ENST00000617647 MRE11P49959 708 aa9.47□□□□□ -0.89
PDE6A-205ENST00000617647 CNKSR2Q8WXI2 1034 aa9.46□□□□□ -0.89
PDE6A-205ENST00000617647 ZNF771Q7L3S4 317 aaPredicted RBP9.46□□□□□ -0.9
PDE6A-205ENST00000617647 MTERF4Q7Z6M4 381 aaKnown RBP9.45□□□□□ -0.9
PDE6A-205ENST00000617647 KLHL34Q8N239 644 aa9.45□□□□□ -0.9
PDE6A-205ENST00000617647 RCAN3Q9UKA8 241 aa9.45□□□□□ -0.9
PDE6A-205ENST00000617647 FAM161AQ3B820 660 aa9.44□□□□□ -0.9
PDE6A-205ENST00000617647 TNNT3P45378 269 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-205ENST00000617647 PANK2Q9BZ23 570 aa9.44□□□□□ -0.9
PDE6A-205ENST00000617647 APPP05067 770 aa9.43□□□□□ -0.9
PDE6A-205ENST00000617647 E9PSI1 815 aa9.43□□□□□ -0.9
PDE6A-205ENST00000617647 SLC4A2P04920 1241 aa9.43□□□□□ -0.9
PDE6A-205ENST00000617647 CHMP4AQ9BY43 222 aa9.43□□□□□ -0.9
PDE6A-205ENST00000617647 XRCC6P12956 609 aaKnown RBP eCLIP9.42□□□□□ -0.9
PDE6A-205ENST00000617647 RRP1P56182 461 aaKnown RBP9.42□□□□□ -0.9
PDE6A-205ENST00000617647 GOLGA6L22H0YM25 854 aa9.42□□□□□ -0.9
PDE6A-205ENST00000617647 CEP164Q9UPV0 1460 aa9.42□□□□□ -0.9
PDE6A-205ENST00000617647 KIF21BO75037 1637 aa9.41□□□□□ -0.9
PDE6A-205ENST00000617647 CCDC184Q52MB2 194 aa9.41□□□□□ -0.9
PDE6A-205ENST00000617647 AEBP1Q8IUX7 1158 aa9.41□□□□□ -0.9
PDE6A-205ENST00000617647 IPO4Q8TEX9 1081 aaKnown RBP9.41□□□□□ -0.9
PDE6A-205ENST00000617647 RAB3GAP2Q9H2M9 1393 aa9.41□□□□□ -0.9
PDE6A-205ENST00000617647 UQCRHLA0A096LP55 91 aa9.41□□□□□ -0.9
PDE6A-205ENST00000617647 UQCRHP07919 91 aa9.41□□□□□ -0.9
PDE6A-205ENST00000617647 HSPA5P11021 654 aaKnown RBP9.41□□□□□ -0.9
PDE6A-205ENST00000617647 SKAP1Q86WV1 359 aa9.41□□□□□ -0.9
PDE6A-205ENST00000617647 SMAP1Q8IYB5 467 aaPredicted RBP9.4□□□□□ -0.9
PDE6A-205ENST00000617647 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.4□□□□□ -0.9
PDE6A-205ENST00000617647 RUSC2Q8N2Y8 1516 aa9.4□□□□□ -0.9
PDE6A-205ENST00000617647 GRPEL1Q9HAV7 217 aa9.4□□□□□ -0.91
PDE6A-205ENST00000617647 CGNQ9P2M7 1197 aaKnown RBP9.4□□□□□ -0.91
PDE6A-205ENST00000617647 PRKRIP1Q9H875 184 aaPredicted RBP9.39□□□□□ -0.91
PDE6A-205ENST00000617647 PLIN1O60240 522 aa9.39□□□□□ -0.91
PDE6A-205ENST00000617647 TRAK2O60296 914 aa9.39□□□□□ -0.91
PDE6A-205ENST00000617647 ATAD2BQ9ULI0 1458 aa9.38□□□□□ -0.91
PDE6A-205ENST00000617647 SYNJ1O43426 1573 aa9.38□□□□□ -0.91
PDE6A-205ENST00000617647 CBX1P83916 185 aa9.38□□□□□ -0.91
PDE6A-205ENST00000617647 PPP4R3BQ5MIZ7 849 aa9.38□□□□□ -0.91
PDE6A-205ENST00000617647 CCNB3Q8WWL7 1395 aa9.38□□□□□ -0.91
PDE6A-205ENST00000617647 VPS8Q8N3P4 1428 aa9.38□□□□□ -0.91
PDE6A-205ENST00000617647 HAP1P54257 671 aaPredicted RBP9.36□□□□□ -0.91
PDE6A-205ENST00000617647 KANK4Q5T7N3 995 aaPredicted RBP9.36□□□□□ -0.91
PDE6A-205ENST00000617647 DHX37Q8IY37 1157 aaKnown RBP9.36□□□□□ -0.91
PDE6A-205ENST00000617647 CRBNQ96SW2 442 aa9.36□□□□□ -0.91
PDE6A-205ENST00000617647 DDX11L8A8MPP1 907 aa9.35□□□□□ -0.91
PDE6A-205ENST00000617647 IRX3P78415 501 aaPredicted RBP9.35□□□□□ -0.91
PDE6A-205ENST00000617647 HSCBQ8IWL3 235 aa9.34□□□□□ -0.91
PDE6A-205ENST00000617647 FTSJ3Q8IY81 847 aaKnown RBP9.34□□□□□ -0.91
PDE6A-205ENST00000617647 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
PDE6A-205ENST00000617647 GBP4Q96PP9 640 aa9.34□□□□□ -0.91
PDE6A-205ENST00000617647 CENPJQ9HC77 1338 aaPredicted RBP9.34□□□□□ -0.91
PDE6A-205ENST00000617647 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.91
PDE6A-205ENST00000617647 TAF3Q5VWG9 929 aa9.34□□□□□ -0.91
PDE6A-205ENST00000617647 BIVM-ERCC5R4GMW8 1640 aa9.34□□□□□ -0.92
PDE6A-205ENST00000617647 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.92
PDE6A-205ENST00000617647 CHAF1AQ13111 956 aaPredicted RBP9.34□□□□□ -0.92
PDE6A-205ENST00000617647 ZSCAN30Q86W11 494 aa9.33□□□□□ -0.92
PDE6A-205ENST00000617647 PRDM4Q9UKN5 801 aa9.33□□□□□ -0.92
PDE6A-205ENST00000617647 HSP90AB1P08238 724 aaKnown RBP9.33□□□□□ -0.92
PDE6A-205ENST00000617647 WDR97A6NE52 1622 aa9.33□□□□□ -0.92
PDE6A-205ENST00000617647 NASPP49321 788 aaPredicted RBP9.33□□□□□ -0.92
PDE6A-205ENST00000617647 SMG6Q86US8 1419 aaKnown RBP9.32□□□□□ -0.92
PDE6A-205ENST00000617647 SETD5Q9C0A6 1442 aa9.32□□□□□ -0.92
PDE6A-205ENST00000617647 PTMSP20962 102 aa9.32□□□□□ -0.92
PDE6A-205ENST00000617647 CENPQQ7L2Z9 268 aaPredicted RBP9.32□□□□□ -0.92
PDE6A-205ENST00000617647 MCM4P33991 863 aa9.31□□□□□ -0.92
PDE6A-205ENST00000617647 CCDC173Q0VFZ6 552 aa9.31□□□□□ -0.92
PDE6A-205ENST00000617647 KTN1Q86UP2 1357 aaKnown RBP9.31□□□□□ -0.92
PDE6A-205ENST00000617647 BRD2P25440 801 aaKnown RBP9.3□□□□□ -0.92
PDE6A-205ENST00000617647 KIAA2012Q0VF49 1180 aa9.3□□□□□ -0.92
PDE6A-205ENST00000617647 CHMP5Q9NZZ3 219 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms