RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 CFDP1Q9UEE9 299 aaPredicted RBP17.88■□□□□ 0.45
TULP4-206ENST00000616856 SETD5Q9C0A6 1442 aa17.87■□□□□ 0.45
TULP4-206ENST00000616856 KCNH8Q96L42 1107 aa17.87■□□□□ 0.45
TULP4-206ENST00000616856 PTPRKQ15262 1439 aa17.87■□□□□ 0.45
TULP4-206ENST00000616856 ZNF777Q9ULD5 760 aaPredicted RBP17.86■□□□□ 0.45
TULP4-206ENST00000616856 CDC42BPAQ5VT25 1732 aa17.85■□□□□ 0.45
TULP4-206ENST00000616856 CAMSAP2Q08AD1 1489 aa17.82■□□□□ 0.44
TULP4-206ENST00000616856 YTHDC1Q96MU7 727 aaKnown RBP17.82■□□□□ 0.44
TULP4-206ENST00000616856 CHIC2Q9UKJ5 165 aa17.82■□□□□ 0.44
TULP4-206ENST00000616856 TTC37Q6PGP7 1564 aa17.82■□□□□ 0.44
TULP4-206ENST00000616856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.81■□□□□ 0.44
TULP4-206ENST00000616856 RIMBP3CA6NJZ7 1639 aa17.78■□□□□ 0.44
TULP4-206ENST00000616856 RIMBP3BA6NNM3 1639 aa17.78■□□□□ 0.44
TULP4-206ENST00000616856 RIMBP3Q9UFD9 1639 aa17.78■□□□□ 0.44
TULP4-206ENST00000616856 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
TULP4-206ENST00000616856 DAPK1P53355 1430 aa17.77■□□□□ 0.44
TULP4-206ENST00000616856 WDR7Q9Y4E6 1490 aa17.77■□□□□ 0.43
TULP4-206ENST00000616856 DNMT1P26358 1616 aaKnown RBP17.77■□□□□ 0.43
TULP4-206ENST00000616856 PREX2Q70Z35 1606 aa17.77■□□□□ 0.43
TULP4-206ENST00000616856 CDC42BPBQ9Y5S2 1711 aa17.77■□□□□ 0.43
TULP4-206ENST00000616856 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
TULP4-206ENST00000616856 ABCC5O15440 1437 aa17.76■□□□□ 0.43
TULP4-206ENST00000616856 SIN3AQ96ST3 1273 aa17.76■□□□□ 0.43
TULP4-206ENST00000616856 RRP7BPQ9NSQ0 103 aa17.76■□□□□ 0.43
TULP4-206ENST00000616856 HFM1A2PYH4 1435 aa17.75■□□□□ 0.43
TULP4-206ENST00000616856 ASXL2Q76L83 1435 aa17.75■□□□□ 0.43
TULP4-206ENST00000616856 MYO5CQ9NQX4 1742 aa17.74■□□□□ 0.43
TULP4-206ENST00000616856 ARHGAP5Q13017 1502 aa17.74■□□□□ 0.43
TULP4-206ENST00000616856 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
TULP4-206ENST00000616856 NAIPQ13075 1403 aa17.73■□□□□ 0.43
TULP4-206ENST00000616856 SAMD9LQ8IVG5 1584 aa17.71■□□□□ 0.43
TULP4-206ENST00000616856 HNRNPMP52272 730 aaKnown RBP eCLIP17.7■□□□□ 0.423e-7■■■■□ 20.3
TULP4-206ENST00000616856 PLCH2O75038 1416 aa17.68■□□□□ 0.42
TULP4-206ENST00000616856 CROCC2H7BZ55 1655 aa17.67■□□□□ 0.42
TULP4-206ENST00000616856 GCC2Q8IWJ2 1684 aa17.67■□□□□ 0.42
TULP4-206ENST00000616856 AKNAQ7Z591 1439 aa17.67■□□□□ 0.42
TULP4-206ENST00000616856 ROCK1Q13464 1354 aa17.66■□□□□ 0.42
TULP4-206ENST00000616856 SYCP2Q9BX26 1530 aa17.65■□□□□ 0.42
TULP4-206ENST00000616856 MBD5Q9P267 1494 aa17.64■□□□□ 0.41
TULP4-206ENST00000616856 ABCA9Q8IUA7 1624 aa17.64■□□□□ 0.41
TULP4-206ENST00000616856 KDM6BO15054 1643 aa17.63■□□□□ 0.41
TULP4-206ENST00000616856 ADGBQ8N7X0 1667 aa17.63■□□□□ 0.41
TULP4-206ENST00000616856 EFCAB2Q5VUJ9 269 aa17.63■□□□□ 0.41
TULP4-206ENST00000616856 TSPY4P0CV99 314 aa17.63■□□□□ 0.41
TULP4-206ENST00000616856 TSPY10P0CW01 314 aa17.63■□□□□ 0.41
TULP4-206ENST00000616856 ARHGEF5Q12774 1597 aa17.62■□□□□ 0.41
TULP4-206ENST00000616856 C9orf84Q5VXU9 1444 aa17.62■□□□□ 0.41
TULP4-206ENST00000616856 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
TULP4-206ENST00000616856 CCDC141Q6ZP82 1450 aa17.61■□□□□ 0.41
TULP4-206ENST00000616856 NCOA1Q15788 1441 aa17.61■□□□□ 0.41
TULP4-206ENST00000616856 SHANK2Q9UPX8 1470 aa17.6■□□□□ 0.41
TULP4-206ENST00000616856 ADGRL2O95490 1459 aa17.6■□□□□ 0.41
TULP4-206ENST00000616856 ANKRD30AQ9BXX3 1397 aa17.59■□□□□ 0.41
TULP4-206ENST00000616856 PLEKHH2Q8IVE3 1493 aa17.59■□□□□ 0.41
TULP4-206ENST00000616856 ARHGEF12Q9NZN5 1544 aa17.59■□□□□ 0.41
TULP4-206ENST00000616856 ARAP3Q8WWN8 1544 aa17.58■□□□□ 0.41
TULP4-206ENST00000616856 KIAA1107Q9UPP5 1409 aa17.58■□□□□ 0.4
TULP4-206ENST00000616856 FANCAO15360 1455 aa17.58■□□□□ 0.4
TULP4-206ENST00000616856 TRIM52Q96A61 297 aa17.58■□□□□ 0.4
TULP4-206ENST00000616856 RSPH4AQ5TD94 716 aa17.57■□□□□ 0.4
TULP4-206ENST00000616856 ABCC1P33527 1531 aa17.57■□□□□ 0.4
TULP4-206ENST00000616856 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
TULP4-206ENST00000616856 TRAPPC8Q9Y2L5 1435 aa17.53■□□□□ 0.4
TULP4-206ENST00000616856 KIF15Q9NS87 1388 aa17.52■□□□□ 0.4
TULP4-206ENST00000616856 PPP1R15AO75807 674 aaPredicted RBP17.52■□□□□ 0.4
TULP4-206ENST00000616856 HIRIP3Q9BW71 556 aaPredicted RBP17.52■□□□□ 0.4
TULP4-206ENST00000616856 ANKRD50Q9ULJ7 1429 aa17.51■□□□□ 0.39
TULP4-206ENST00000616856 ADGRL1O94910 1474 aa17.5■□□□□ 0.39
TULP4-206ENST00000616856 AFAP1Q8N556 730 aa17.5■□□□□ 0.39
TULP4-206ENST00000616856 MAST1Q9Y2H9 1570 aa17.5■□□□□ 0.39
TULP4-206ENST00000616856 DENND4BO75064 1496 aaPredicted RBP17.48■□□□□ 0.39
TULP4-206ENST00000616856 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
TULP4-206ENST00000616856 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
TULP4-206ENST00000616856 TONSLQ96HA7 1378 aa17.46■□□□□ 0.39
TULP4-206ENST00000616856 SPAG9O60271 1321 aaKnown RBP17.45■□□□□ 0.38
TULP4-206ENST00000616856 DDX10Q13206 875 aaKnown RBP17.45■□□□□ 0.38
TULP4-206ENST00000616856 FAM69CQ0P6D2 419 aa17.44■□□□□ 0.38
TULP4-206ENST00000616856 PLXNC1O60486 1568 aa17.44■□□□□ 0.38
TULP4-206ENST00000616856 CFAP74Q9C0B2 1584 aa17.43■□□□□ 0.38
TULP4-206ENST00000616856 MAP3K4Q9Y6R4 1608 aa17.43■□□□□ 0.38
TULP4-206ENST00000616856 DIP2BQ9P265 1576 aa17.43■□□□□ 0.38
TULP4-206ENST00000616856 FOXD1Q16676 465 aa17.43■□□□□ 0.38
TULP4-206ENST00000616856 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
TULP4-206ENST00000616856 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
TULP4-206ENST00000616856 GLI2P10070 1586 aa17.42■□□□□ 0.38
TULP4-206ENST00000616856 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
TULP4-206ENST00000616856 PZPP20742 1482 aa17.4■□□□□ 0.38
TULP4-206ENST00000616856 NUP155O75694 1391 aa17.39■□□□□ 0.37
TULP4-206ENST00000616856 ATP7AQ04656 1500 aa17.39■□□□□ 0.37
TULP4-206ENST00000616856 DUOX2Q9NRD8 1548 aa17.39■□□□□ 0.37
TULP4-206ENST00000616856 RTEL1-TNFRSF6BF6WH68 1400 aa17.38■□□□□ 0.37
TULP4-206ENST00000616856 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
TULP4-206ENST00000616856 INO80Q9ULG1 1556 aaPredicted RBP17.38■□□□□ 0.37
TULP4-206ENST00000616856 NEO1Q92859 1461 aa17.37■□□□□ 0.37
TULP4-206ENST00000616856 TSPOAP1O95153 1857 aa17.37■□□□□ 0.37
TULP4-206ENST00000616856 POGZQ7Z3K3 1410 aa17.36■□□□□ 0.37
TULP4-206ENST00000616856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.376e-7■■□□□ 13.7
TULP4-206ENST00000616856 ERBINQ96RT1 1412 aa17.34■□□□□ 0.37
TULP4-206ENST00000616856 RAPGEF3O95398 923 aa17.33■□□□□ 0.37
TULP4-206ENST00000616856 PKD2Q13563 968 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms