RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 ABCC5O15440 1437 aa31.22■■■□□ 2.59
CLN5-203ENST00000616833 GCC2Q8IWJ2 1684 aa31.22■■■□□ 2.59
CLN5-203ENST00000616833 DENND4BO75064 1496 aaPredicted RBP31.22■■■□□ 2.59
CLN5-203ENST00000616833 TROQ12816 1431 aaPredicted RBP31.21■■■□□ 2.59
CLN5-203ENST00000616833 TIMELESSQ9UNS1 1208 aa31.21■■■□□ 2.59
CLN5-203ENST00000616833 MPHOSPH9Q99550 1183 aa31.21■■■□□ 2.59
CLN5-203ENST00000616833 PLEKHD1A6NEE1 506 aa31.12■■■□□ 2.57
CLN5-203ENST00000616833 GPATCH8Q9UKJ3 1502 aaKnown RBP31.11■■■□□ 2.57
CLN5-203ENST00000616833 CAMSAP2Q08AD1 1489 aa31.11■■■□□ 2.57
CLN5-203ENST00000616833 DNMT1P26358 1616 aaKnown RBP31.11■■■□□ 2.57
CLN5-203ENST00000616833 ATP10BO94823 1461 aa31.08■■■□□ 2.57
CLN5-203ENST00000616833 AKNAQ7Z591 1439 aa31.07■■■□□ 2.56
CLN5-203ENST00000616833 CHD1O14646 1710 aa31.05■■■□□ 2.56
CLN5-203ENST00000616833 SLC4A1APQ9BWU0 796 aaKnown RBP31.04■■■□□ 2.56
CLN5-203ENST00000616833 ABCA8O94911 1581 aa31.04■■■□□ 2.56
CLN5-203ENST00000616833 KDM5BQ9UGL1 1544 aa31.03■■■□□ 2.56
CLN5-203ENST00000616833 PTPRGP23470 1445 aa31.03■■■□□ 2.56
CLN5-203ENST00000616833 ROCK1Q13464 1354 aa31■■■□□ 2.55
CLN5-203ENST00000616833 L3MBTL2Q969R5 705 aa30.99■■■□□ 2.55
CLN5-203ENST00000616833 ITSN2Q9NZM3 1697 aa30.96■■■□□ 2.55
CLN5-203ENST00000616833 HNRNPMP52272 730 aaKnown RBP eCLIP30.94■■■□□ 2.54
CLN5-203ENST00000616833 ADCY10Q96PN6 1610 aa30.93■■■□□ 2.54
CLN5-203ENST00000616833 ERCC6L2Q5T890 1561 aa30.92■■■□□ 2.54
CLN5-203ENST00000616833 NCOA1Q15788 1441 aa30.92■■■□□ 2.54
CLN5-203ENST00000616833 CDC42BPAQ5VT25 1732 aa30.91■■■□□ 2.54
CLN5-203ENST00000616833 HSPA5P11021 654 aaKnown RBP30.89■■■□□ 2.54
CLN5-203ENST00000616833 ABCC10Q5T3U5 1492 aa30.88■■■□□ 2.53
CLN5-203ENST00000616833 ANKRD30BQ9BXX2 1392 aa30.87■■■□□ 2.53
CLN5-203ENST00000616833 NBPF8Q3BBV2 869 aa30.83■■■□□ 2.53
CLN5-203ENST00000616833 PZPP20742 1482 aa30.82■■■□□ 2.52
CLN5-203ENST00000616833 ANKRD30AQ9BXX3 1397 aa30.81■■■□□ 2.52
CLN5-203ENST00000616833 PKD2Q13563 968 aa30.8■■■□□ 2.52
CLN5-203ENST00000616833 ADGBQ8N7X0 1667 aa30.8■■■□□ 2.52
CLN5-203ENST00000616833 ANP32CO43423 234 aa30.79■■■□□ 2.52
CLN5-203ENST00000616833 CROCC2H7BZ55 1655 aa30.79■■■□□ 2.52
CLN5-203ENST00000616833 ZNF326Q5BKZ1 582 aaKnown RBP30.79■■■□□ 2.52
CLN5-203ENST00000616833 TSPY4P0CV99 314 aa30.77■■■□□ 2.52
CLN5-203ENST00000616833 TSPY10P0CW01 314 aa30.77■■■□□ 2.52
CLN5-203ENST00000616833 C9orf84Q5VXU9 1444 aa30.76■■■□□ 2.52
CLN5-203ENST00000616833 ANKRD50Q9ULJ7 1429 aa30.76■■■□□ 2.51
CLN5-203ENST00000616833 RPRD2Q5VT52 1461 aaKnown RBP30.75■■■□□ 2.51
CLN5-203ENST00000616833 WASHC2AQ641Q2 1341 aa30.74■■■□□ 2.51
CLN5-203ENST00000616833 EIF4G2P78344 907 aaKnown RBP eCLIP30.73■■■□□ 2.51
CLN5-203ENST00000616833 ADGRL2O95490 1459 aa30.72■■■□□ 2.51
CLN5-203ENST00000616833 NUP155O75694 1391 aa30.71■■■□□ 2.51
CLN5-203ENST00000616833 C11orf95C9JLR9 678 aaPredicted RBP30.71■■■□□ 2.51
CLN5-203ENST00000616833 TEX14Q8IWB6 1497 aa30.68■■■□□ 2.5
CLN5-203ENST00000616833 SHROOM2Q13796 1616 aa30.66■■■□□ 2.5
CLN5-203ENST00000616833 CDC42BPBQ9Y5S2 1711 aa30.66■■■□□ 2.5
CLN5-203ENST00000616833 KIF15Q9NS87 1388 aa30.65■■■□□ 2.5
CLN5-203ENST00000616833 SAMD9LQ8IVG5 1584 aa30.64■■■□□ 2.5
CLN5-203ENST00000616833 TTC37Q6PGP7 1564 aa30.63■■■□□ 2.49
CLN5-203ENST00000616833 KIAA1107Q9UPP5 1409 aa30.63■■■□□ 2.49
CLN5-203ENST00000616833 MBD5Q9P267 1494 aa30.61■■■□□ 2.49
CLN5-203ENST00000616833 ARHGAP5Q13017 1502 aa30.59■■■□□ 2.49
CLN5-203ENST00000616833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.58■■■□□ 2.49
CLN5-203ENST00000616833 CNGB1Q14028 1251 aaPredicted RBP30.57■■■□□ 2.49
CLN5-203ENST00000616833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.57■■■□□ 2.48
CLN5-203ENST00000616833 SYCP2Q9BX26 1530 aa30.57■■■□□ 2.48
CLN5-203ENST00000616833 PREX2Q70Z35 1606 aa30.56■■■□□ 2.48
CLN5-203ENST00000616833 KDM2AQ9Y2K7 1162 aa30.55■■■□□ 2.48
CLN5-203ENST00000616833 ABCC2Q92887 1545 aa30.55■■■□□ 2.48
CLN5-203ENST00000616833 POLR3GLQ9BT43 218 aa30.55■■■□□ 2.48
CLN5-203ENST00000616833 SHANK2Q9UPX8 1470 aa30.55■■■□□ 2.48
CLN5-203ENST00000616833 CCDC141Q6ZP82 1450 aa30.53■■■□□ 2.48
CLN5-203ENST00000616833 CCER2I3L3R5 266 aa30.52■■■□□ 2.48
CLN5-203ENST00000616833 SUPT16HQ9Y5B9 1047 aaKnown RBP30.48■■■□□ 2.47
CLN5-203ENST00000616833 ARHGEF5Q12774 1597 aa30.47■■■□□ 2.47
CLN5-203ENST00000616833 CCDC7Q96M83 1385 aa30.46■■■□□ 2.47
CLN5-203ENST00000616833 CLASP1Q7Z460 1538 aa30.46■■■□□ 2.47
CLN5-203ENST00000616833 CCDC184Q52MB2 194 aa30.44■■■□□ 2.46
CLN5-203ENST00000616833 ZCCHC11Q5TAX3 1644 aaKnown RBP30.43■■■□□ 2.46
CLN5-203ENST00000616833 KIF7Q2M1P5 1343 aa30.42■■■□□ 2.46
CLN5-203ENST00000616833 ARHGEF12Q9NZN5 1544 aa30.4■■■□□ 2.46
CLN5-203ENST00000616833 DCAF11Q8TEB1 546 aa30.4■■■□□ 2.46
CLN5-203ENST00000616833 MYO5CQ9NQX4 1742 aa30.39■■■□□ 2.46
CLN5-203ENST00000616833 RGL3Q3MIN7 710 aa30.39■■■□□ 2.46
CLN5-203ENST00000616833 CNTLNQ9NXG0 1405 aa30.38■■■□□ 2.45
CLN5-203ENST00000616833 BCANQ96GW7 911 aa30.38■■■□□ 2.45
CLN5-203ENST00000616833 SPATA31E1Q6ZUB1 1445 aa30.37■■■□□ 2.45
CLN5-203ENST00000616833 USP47Q96K76 1375 aa30.35■■■□□ 2.45
CLN5-203ENST00000616833 RSPH4AQ5TD94 716 aa30.34■■■□□ 2.45
CLN5-203ENST00000616833 FAM135AQ9P2D6 1515 aa30.34■■■□□ 2.45
CLN5-203ENST00000616833 PLEKHH2Q8IVE3 1493 aa30.34■■■□□ 2.45
CLN5-203ENST00000616833 HNRNPUQ00839 825 aaKnown RBP eCLIP30.31■■■□□ 2.44
CLN5-203ENST00000616833 EFCAB2Q5VUJ9 269 aa30.3■■■□□ 2.44
CLN5-203ENST00000616833 AFAP1Q8N556 730 aa30.3■■■□□ 2.44
CLN5-203ENST00000616833 CARD11Q9BXL7 1154 aa30.3■■■□□ 2.44
CLN5-203ENST00000616833 KDM5DQ9BY66 1539 aa30.3■■■□□ 2.44
CLN5-203ENST00000616833 PLCH2O75038 1416 aa30.28■■■□□ 2.44
CLN5-203ENST00000616833 TRAPPC8Q9Y2L5 1435 aa30.28■■■□□ 2.44
CLN5-203ENST00000616833 PRKRIP1Q9H875 184 aaPredicted RBP30.26■■■□□ 2.43
CLN5-203ENST00000616833 BCORL1Q5H9F3 1711 aa30.26■■■□□ 2.43
CLN5-203ENST00000616833 FKBP8Q14318 412 aa30.26■■■□□ 2.43
CLN5-203ENST00000616833 FAM9BQ8IZU0 186 aa30.25■■■□□ 2.43
CLN5-203ENST00000616833 MYT1LQ9UL68 1186 aa30.22■■■□□ 2.43
CLN5-203ENST00000616833 UHRF1BP1LA0JNW5 1464 aa30.2■■■□□ 2.43
CLN5-203ENST00000616833 CCDC144AA2RUR9 1427 aa30.19■■■□□ 2.42
CLN5-203ENST00000616833 ST20-MTHFSA0A0A6YYL1 179 aa30.19■■■□□ 2.42
CLN5-203ENST00000616833 MRS2Q9HD23 443 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms