RNA–Protein interactions for RNA: ENST00000616821.4

HIP1-207, Transcript of huntingtin interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene HIP1, Length 3,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1-207ENST00000616821 NCOA2Q15596 1464 aa13.64□□□□□ -0.23
HIP1-207ENST00000616821 NAP1L5Q96NT1 182 aaPredicted RBP13.64□□□□□ -0.23
HIP1-207ENST00000616821 NAIPQ13075 1403 aa13.63□□□□□ -0.23
HIP1-207ENST00000616821 NPM2Q86SE8 214 aaKnown RBP13.63□□□□□ -0.23
HIP1-207ENST00000616821 MRS2Q9HD23 443 aa13.63□□□□□ -0.23
HIP1-207ENST00000616821 DHX37Q8IY37 1157 aaKnown RBP13.63□□□□□ -0.23
HIP1-207ENST00000616821 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
HIP1-207ENST00000616821 PAK3O75914 559 aaPredicted RBP13.62□□□□□ -0.23
HIP1-207ENST00000616821 RSPH4AQ5TD94 716 aa13.61□□□□□ -0.23
HIP1-207ENST00000616821 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
HIP1-207ENST00000616821 MTUS2Q5JR59 1369 aa13.61□□□□□ -0.23
HIP1-207ENST00000616821 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
HIP1-207ENST00000616821 CC2D2AQ9P2K1 1620 aa13.59□□□□□ -0.23
HIP1-207ENST00000616821 CCDC7Q96M83 1385 aa13.58□□□□□ -0.24
HIP1-207ENST00000616821 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.24
HIP1-207ENST00000616821 ANP32AP39687 249 aaKnown RBP13.57□□□□□ -0.24
HIP1-207ENST00000616821 C11orf95C9JLR9 678 aaPredicted RBP13.57□□□□□ -0.24
HIP1-207ENST00000616821 C14orf37Q86TY3 774 aa13.56□□□□□ -0.24
HIP1-207ENST00000616821 IPO9Q96P70 1041 aaKnown RBP13.56□□□□□ -0.24
HIP1-207ENST00000616821 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
HIP1-207ENST00000616821 MYOM3Q5VTT5 1437 aa13.55□□□□□ -0.24
HIP1-207ENST00000616821 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
HIP1-207ENST00000616821 ZBTB47Q9UFB7 747 aaPredicted RBP13.54□□□□□ -0.24
HIP1-207ENST00000616821 RRP7BPQ9NSQ0 103 aa13.53□□□□□ -0.24
HIP1-207ENST00000616821 L3MBTL2Q969R5 705 aa13.53□□□□□ -0.24
HIP1-207ENST00000616821 NAP1L2Q9ULW6 460 aaPredicted RBP13.53□□□□□ -0.24
HIP1-207ENST00000616821 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
HIP1-207ENST00000616821 SNAPC4Q5SXM2 1469 aa13.53□□□□□ -0.24
HIP1-207ENST00000616821 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
HIP1-207ENST00000616821 AKNAQ7Z591 1439 aa13.51□□□□□ -0.25
HIP1-207ENST00000616821 CHIC2Q9UKJ5 165 aa13.5□□□□□ -0.25
HIP1-207ENST00000616821 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
HIP1-207ENST00000616821 DENND4BO75064 1496 aaPredicted RBP13.5□□□□□ -0.25
HIP1-207ENST00000616821 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
HIP1-207ENST00000616821 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
HIP1-207ENST00000616821 MPHOSPH9Q99550 1183 aa13.49□□□□□ -0.25
HIP1-207ENST00000616821 RRP9O43818 475 aaKnown RBP13.48□□□□□ -0.25
HIP1-207ENST00000616821 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
HIP1-207ENST00000616821 HECW1Q76N89 1606 aa13.48□□□□□ -0.25
HIP1-207ENST00000616821 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.25
HIP1-207ENST00000616821 SUPT6HQ7KZ85 1726 aaKnown RBP13.46□□□□□ -0.25
HIP1-207ENST00000616821 SAMD1Q6SPF0 538 aaPredicted RBP13.46□□□□□ -0.25
HIP1-207ENST00000616821 NBPF8Q3BBV2 869 aa13.46□□□□□ -0.26
HIP1-207ENST00000616821 CUL7Q14999 1698 aa13.45□□□□□ -0.26
HIP1-207ENST00000616821 CTTNBP2Q8WZ74 1663 aa13.45□□□□□ -0.26
HIP1-207ENST00000616821 EHBP1L1Q8N3D4 1523 aa13.45□□□□□ -0.26
HIP1-207ENST00000616821 RAD54L2Q9Y4B4 1467 aa13.44□□□□□ -0.26
HIP1-207ENST00000616821 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
HIP1-207ENST00000616821 FOXD1Q16676 465 aa13.44□□□□□ -0.26
HIP1-207ENST00000616821 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
HIP1-207ENST00000616821 GCC2Q8IWJ2 1684 aa13.44□□□□□ -0.26
HIP1-207ENST00000616821 UGGT2Q9NYU1 1516 aa13.43□□□□□ -0.26
HIP1-207ENST00000616821 BBXQ8WY36 941 aaPredicted RBP13.43□□□□□ -0.26
HIP1-207ENST00000616821 SPATA31E1Q6ZUB1 1445 aa13.43□□□□□ -0.26
HIP1-207ENST00000616821 FANCD2Q9BXW9 1451 aa13.43□□□□□ -0.26
HIP1-207ENST00000616821 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
HIP1-207ENST00000616821 PHF23Q9BUL5 403 aaPredicted RBP13.42□□□□□ -0.26
HIP1-207ENST00000616821 KDM6BO15054 1643 aa13.41□□□□□ -0.26
HIP1-207ENST00000616821 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
HIP1-207ENST00000616821 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
HIP1-207ENST00000616821 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
HIP1-207ENST00000616821 CNGB1Q14028 1251 aaPredicted RBP13.4□□□□□ -0.26
HIP1-207ENST00000616821 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
HIP1-207ENST00000616821 IPO4Q8TEX9 1081 aaKnown RBP13.4□□□□□ -0.26
HIP1-207ENST00000616821 ANKRD30BQ9BXX2 1392 aa13.4□□□□□ -0.26
HIP1-207ENST00000616821 RPRD2Q5VT52 1461 aaKnown RBP13.39□□□□□ -0.27
HIP1-207ENST00000616821 CHMP4BQ9H444 224 aaKnown RBP13.39□□□□□ -0.27
HIP1-207ENST00000616821 SAMD9Q5K651 1589 aa13.39□□□□□ -0.27
HIP1-207ENST00000616821 DHX29Q7Z478 1369 aaKnown RBP13.39□□□□□ -0.27
HIP1-207ENST00000616821 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
HIP1-207ENST00000616821 PLCB2Q00722 1185 aa13.38□□□□□ -0.27
HIP1-207ENST00000616821 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
HIP1-207ENST00000616821 TEX14Q8IWB6 1497 aa13.37□□□□□ -0.27
HIP1-207ENST00000616821 TCERG1O14776 1098 aaKnown RBP13.37□□□□□ -0.27
HIP1-207ENST00000616821 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
HIP1-207ENST00000616821 POLR1AO95602 1720 aaPredicted RBP13.36□□□□□ -0.27
HIP1-207ENST00000616821 FAM43AQ8N2R8 423 aa13.36□□□□□ -0.27
HIP1-207ENST00000616821 WASHC2CQ9Y4E1 1318 aa13.36□□□□□ -0.27
HIP1-207ENST00000616821 MAGI3Q5TCQ9 1506 aa13.36□□□□□ -0.27
HIP1-207ENST00000616821 PNISRQ8TF01 805 aaKnown RBP13.36□□□□□ -0.27
HIP1-207ENST00000616821 POLR3GLQ9BT43 218 aa13.36□□□□□ -0.27
HIP1-207ENST00000616821 SENP3-EIF4A1A0A087X0R7 540 aa13.35□□□□□ -0.27
HIP1-207ENST00000616821 NEFMP07197 916 aa13.35□□□□□ -0.27
HIP1-207ENST00000616821 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
HIP1-207ENST00000616821 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
HIP1-207ENST00000616821 BRPF3Q9ULD4 1205 aa13.35□□□□□ -0.27
HIP1-207ENST00000616821 HSP90AA1P07900 732 aaKnown RBP13.34□□□□□ -0.27
HIP1-207ENST00000616821 TMC1Q8TDI8 760 aa13.34□□□□□ -0.27
HIP1-207ENST00000616821 LAS1LQ9Y4W2 734 aaKnown RBP13.34□□□□□ -0.27
HIP1-207ENST00000616821 BCCIPQ9P287 314 aaKnown RBP eCLIP13.34□□□□□ -0.27
HIP1-207ENST00000616821 PDE4AP27815 886 aa13.33□□□□□ -0.27
HIP1-207ENST00000616821 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
HIP1-207ENST00000616821 PPM1GO15355 546 aaPredicted RBP13.32□□□□□ -0.28
HIP1-207ENST00000616821 RRP1P56182 461 aaKnown RBP13.32□□□□□ -0.28
HIP1-207ENST00000616821 EXOC6Q8TAG9 804 aa13.32□□□□□ -0.28
HIP1-207ENST00000616821 CNKSR2Q8WXI2 1034 aa13.31□□□□□ -0.28
HIP1-207ENST00000616821 ARID4BQ4LE39 1312 aaPredicted RBP13.31□□□□□ -0.28
HIP1-207ENST00000616821 MS4A1P11836 297 aa13.3□□□□□ -0.28
HIP1-207ENST00000616821 BACH2Q9BYV9 841 aa13.3□□□□□ -0.28
HIP1-207ENST00000616821 KIF21AQ7Z4S6 1674 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms