RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 PRM3Q9NNZ6 103 aa16.96■□□□□ 0.31
NLRC3-204ENST00000615877 CSB-PGBD3P0DP91 1061 aa16.96■□□□□ 0.31
NLRC3-204ENST00000615877 CCNB3Q8WWL7 1395 aa16.96■□□□□ 0.31
NLRC3-204ENST00000615877 GOLGA6L4A6NEF3 574 aa16.95■□□□□ 0.3
NLRC3-204ENST00000615877 TIMELESSQ9UNS1 1208 aa16.94■□□□□ 0.3
NLRC3-204ENST00000615877 GNL2Q13823 731 aaKnown RBP16.94■□□□□ 0.3
NLRC3-204ENST00000615877 PDE4CQ08493 712 aa16.93■□□□□ 0.3
NLRC3-204ENST00000615877 DRC7Q8IY82 874 aa16.93■□□□□ 0.3
NLRC3-204ENST00000615877 KIF27Q86VH2 1401 aa16.92■□□□□ 0.3
NLRC3-204ENST00000615877 TMF1P82094 1093 aa16.92■□□□□ 0.3
NLRC3-204ENST00000615877 ANO8Q9HCE9 1232 aaPredicted RBP16.92■□□□□ 0.3
NLRC3-204ENST00000615877 PNNQ9H307 717 aaKnown RBP16.91■□□□□ 0.3
NLRC3-204ENST00000615877 RTF1Q92541 710 aaKnown RBP16.91■□□□□ 0.3
NLRC3-204ENST00000615877 HSPA5P11021 654 aaKnown RBP16.91■□□□□ 0.3
NLRC3-204ENST00000615877 PTMSP20962 102 aa16.91■□□□□ 0.3
NLRC3-204ENST00000615877 MCCP23508 829 aa16.91■□□□□ 0.3
NLRC3-204ENST00000615877 TCERG1O14776 1098 aaKnown RBP16.91■□□□□ 0.3
NLRC3-204ENST00000615877 GBP4Q96PP9 640 aa16.9■□□□□ 0.3
NLRC3-204ENST00000615877 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
NLRC3-204ENST00000615877 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
NLRC3-204ENST00000615877 GGT6Q6P531 493 aa16.88■□□□□ 0.29
NLRC3-204ENST00000615877 DCAF11Q8TEB1 546 aa16.88■□□□□ 0.29
NLRC3-204ENST00000615877 CFAP44Q96MT7 982 aa16.88■□□□□ 0.29
NLRC3-204ENST00000615877 IPO9Q96P70 1041 aaKnown RBP16.88■□□□□ 0.29
NLRC3-204ENST00000615877 TMX4Q9H1E5 349 aaPredicted RBP16.88■□□□□ 0.29
NLRC3-204ENST00000615877 RCAN3Q9UKA8 241 aa16.86■□□□□ 0.29
NLRC3-204ENST00000615877 SLKQ9H2G2 1235 aaPredicted RBP16.86■□□□□ 0.29
NLRC3-204ENST00000615877 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
NLRC3-204ENST00000615877 SETD5Q9C0A6 1442 aa16.86■□□□□ 0.29
NLRC3-204ENST00000615877 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
NLRC3-204ENST00000615877 G3V3G9 751 aa16.85■□□□□ 0.29
NLRC3-204ENST00000615877 DCAF8Q5TAQ9 597 aa16.85■□□□□ 0.29
NLRC3-204ENST00000615877 ARID3AQ99856 593 aa16.84■□□□□ 0.29
NLRC3-204ENST00000615877 HDGFP51858 240 aaKnown RBP16.84■□□□□ 0.29
NLRC3-204ENST00000615877 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
NLRC3-204ENST00000615877 GOLGA6L3A6NEY3 463 aa16.84■□□□□ 0.29
NLRC3-204ENST00000615877 KIAA2012Q0VF49 1180 aa16.84■□□□□ 0.29
NLRC3-204ENST00000615877 KANK1Q14678 1352 aa16.83■□□□□ 0.29
NLRC3-204ENST00000615877 FHAD1B1AJZ9 1412 aa16.8■□□□□ 0.28
NLRC3-204ENST00000615877 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
NLRC3-204ENST00000615877 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
NLRC3-204ENST00000615877 NUTM2DQ5VT03 806 aaPredicted RBP16.79■□□□□ 0.28
NLRC3-204ENST00000615877 HSP90B1P14625 803 aaKnown RBP16.76■□□□□ 0.27
NLRC3-204ENST00000615877 TAF7LQ5H9L4 462 aa16.76■□□□□ 0.27
NLRC3-204ENST00000615877 GORABQ5T7V8 394 aa16.76■□□□□ 0.27
NLRC3-204ENST00000615877 NOC3LQ8WTT2 800 aaKnown RBP16.76■□□□□ 0.27
NLRC3-204ENST00000615877 IPO8O15397 1037 aaKnown RBP16.76■□□□□ 0.27
NLRC3-204ENST00000615877 SYAP1Q96A49 352 aaPredicted RBP16.75■□□□□ 0.27
NLRC3-204ENST00000615877 RALBP1Q15311 655 aa16.75■□□□□ 0.27
NLRC3-204ENST00000615877 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
NLRC3-204ENST00000615877 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
NLRC3-204ENST00000615877 KIAA1211Q6ZU35 1233 aa16.74■□□□□ 0.27
NLRC3-204ENST00000615877 CREBRFQ8IUR6 639 aa16.74■□□□□ 0.27
NLRC3-204ENST00000615877 ITPRIPQ8IWB1 547 aa16.74■□□□□ 0.27
NLRC3-204ENST00000615877 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
NLRC3-204ENST00000615877 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
NLRC3-204ENST00000615877 VPS53Q5VIR6 699 aa16.73■□□□□ 0.27
NLRC3-204ENST00000615877 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
NLRC3-204ENST00000615877 NUTM2FA1L443 756 aa16.73■□□□□ 0.27
NLRC3-204ENST00000615877 FOXD1Q16676 465 aa16.72■□□□□ 0.27
NLRC3-204ENST00000615877 LTV1Q96GA3 475 aaPredicted RBP16.72■□□□□ 0.27
NLRC3-204ENST00000615877 VPS8Q8N3P4 1428 aa16.71■□□□□ 0.27
NLRC3-204ENST00000615877 MSH5O43196 834 aa16.71■□□□□ 0.27
NLRC3-204ENST00000615877 SOGA1O94964 1423 aa16.7■□□□□ 0.26
NLRC3-204ENST00000615877 RAB3GAP2Q9H2M9 1393 aa16.69■□□□□ 0.26
NLRC3-204ENST00000615877 TNNT3P45378 269 aaPredicted RBP16.68■□□□□ 0.26
NLRC3-204ENST00000615877 FRAT2O75474 233 aaPredicted RBP16.67■□□□□ 0.26
NLRC3-204ENST00000615877 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
NLRC3-204ENST00000615877 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
NLRC3-204ENST00000615877 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
NLRC3-204ENST00000615877 CALD1Q05682 793 aaKnown RBP16.67■□□□□ 0.26
NLRC3-204ENST00000615877 HTATSF1O43719 755 aaKnown RBP16.67■□□□□ 0.26
NLRC3-204ENST00000615877 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
NLRC3-204ENST00000615877 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
NLRC3-204ENST00000615877 HSP90AA2PQ14568 343 aaPredicted RBP16.66■□□□□ 0.26
NLRC3-204ENST00000615877 ROCK2O75116 1388 aaKnown RBP16.66■□□□□ 0.26
NLRC3-204ENST00000615877 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
NLRC3-204ENST00000615877 WWC1Q8IX03 1113 aa16.65■□□□□ 0.26
NLRC3-204ENST00000615877 PKD2Q13563 968 aa16.65■□□□□ 0.26
NLRC3-204ENST00000615877 SLC4A10Q6U841 1118 aa16.65■□□□□ 0.26
NLRC3-204ENST00000615877 TOMM22Q9NS69 142 aa16.65■□□□□ 0.26
NLRC3-204ENST00000615877 TRIM6-TRIM34B2RNG4 842 aa16.65■□□□□ 0.26
NLRC3-204ENST00000615877 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
NLRC3-204ENST00000615877 KANK4Q5T7N3 995 aaPredicted RBP16.65■□□□□ 0.26
NLRC3-204ENST00000615877 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
NLRC3-204ENST00000615877 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
NLRC3-204ENST00000615877 TPM4P67936 248 aa16.63■□□□□ 0.25
NLRC3-204ENST00000615877 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
NLRC3-204ENST00000615877 DDX11L8A8MPP1 907 aa16.61■□□□□ 0.25
NLRC3-204ENST00000615877 RAD21O60216 631 aa16.61■□□□□ 0.25
NLRC3-204ENST00000615877 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
NLRC3-204ENST00000615877 PDE3BQ13370 1112 aa16.61■□□□□ 0.25
NLRC3-204ENST00000615877 GSE1Q14687 1217 aa16.61■□□□□ 0.25
NLRC3-204ENST00000615877 NGDNQ8NEJ9 315 aaKnown RBP16.61■□□□□ 0.25
NLRC3-204ENST00000615877 MPHOSPH9Q99550 1183 aa16.6■□□□□ 0.25
NLRC3-204ENST00000615877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.25
NLRC3-204ENST00000615877 A0A0U1RQG5 324 aaPredicted RBP16.6■□□□□ 0.25
NLRC3-204ENST00000615877 CSPP1Q1MSJ5 1256 aa16.6■□□□□ 0.25
NLRC3-204ENST00000615877 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
NLRC3-204ENST00000615877 MARCH6O60337 910 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms