RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 CCDC7Q96M83 1385 aa13.75□□□□□ -0.21
RDM1-218ENST00000615288 ARID4BQ4LE39 1312 aaPredicted RBP13.75□□□□□ -0.21
RDM1-218ENST00000615288 WASHC2AQ641Q2 1341 aa13.75□□□□□ -0.21
RDM1-218ENST00000615288 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
RDM1-218ENST00000615288 KIAA0586Q9BVV6 1533 aa13.74□□□□□ -0.21
RDM1-218ENST00000615288 ANKRD30BQ9BXX2 1392 aa13.74□□□□□ -0.21
RDM1-218ENST00000615288 RAPGEF6Q8TEU7 1601 aa13.74□□□□□ -0.21
RDM1-218ENST00000615288 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
RDM1-218ENST00000615288 ZBED9Q6R2W3 1325 aa13.73□□□□□ -0.21
RDM1-218ENST00000615288 ARHGEF12Q9NZN5 1544 aa13.72□□□□□ -0.21
RDM1-218ENST00000615288 IFT140Q96RY7 1462 aa13.72□□□□□ -0.21
RDM1-218ENST00000615288 CDK13Q14004 1512 aaKnown RBP13.71□□□□□ -0.21
RDM1-218ENST00000615288 HSPA5P11021 654 aaKnown RBP13.71□□□□□ -0.21
RDM1-218ENST00000615288 SHANK2Q9UPX8 1470 aa13.71□□□□□ -0.21
RDM1-218ENST00000615288 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
RDM1-218ENST00000615288 ABCC5O15440 1437 aa13.7□□□□□ -0.22
RDM1-218ENST00000615288 KDM5DQ9BY66 1539 aa13.69□□□□□ -0.22
RDM1-218ENST00000615288 HNRNPUQ00839 825 aaKnown RBP eCLIP13.69□□□□□ -0.22
RDM1-218ENST00000615288 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
RDM1-218ENST00000615288 PPP4R2Q9NY27 417 aa13.69□□□□□ -0.22
RDM1-218ENST00000615288 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
RDM1-218ENST00000615288 DISP1Q96F81 1524 aa13.68□□□□□ -0.22
RDM1-218ENST00000615288 ROCK2O75116 1388 aaKnown RBP13.68□□□□□ -0.22
RDM1-218ENST00000615288 NUP153P49790 1475 aaKnown RBP13.67□□□□□ -0.22
RDM1-218ENST00000615288 BCANQ96GW7 911 aa13.67□□□□□ -0.22
RDM1-218ENST00000615288 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
RDM1-218ENST00000615288 PZPP20742 1482 aa13.67□□□□□ -0.22
RDM1-218ENST00000615288 TROQ12816 1431 aaPredicted RBP13.66□□□□□ -0.22
RDM1-218ENST00000615288 UHRF1BP1Q6BDS2 1440 aa13.66□□□□□ -0.22
RDM1-218ENST00000615288 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
RDM1-218ENST00000615288 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.22
RDM1-218ENST00000615288 KIAA1107Q9UPP5 1409 aa13.64□□□□□ -0.23
RDM1-218ENST00000615288 KDM5CP41229 1560 aa13.64□□□□□ -0.23
RDM1-218ENST00000615288 CAMSAP2Q08AD1 1489 aa13.64□□□□□ -0.23
RDM1-218ENST00000615288 RALGAPBQ86X10 1494 aa13.64□□□□□ -0.23
RDM1-218ENST00000615288 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
RDM1-218ENST00000615288 MAGI1Q96QZ7 1491 aaPredicted RBP13.62□□□□□ -0.23
RDM1-218ENST00000615288 L3MBTL2Q969R5 705 aa13.62□□□□□ -0.23
RDM1-218ENST00000615288 ZMYM4Q5VZL5 1548 aa13.62□□□□□ -0.23
RDM1-218ENST00000615288 HIRIP3Q9BW71 556 aaPredicted RBP13.61□□□□□ -0.23
RDM1-218ENST00000615288 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
RDM1-218ENST00000615288 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
RDM1-218ENST00000615288 E9PCH4 1651 aa13.59□□□□□ -0.23
RDM1-218ENST00000615288 INSRP06213 1382 aa13.58□□□□□ -0.23
RDM1-218ENST00000615288 ARHGEF5Q12774 1597 aa13.58□□□□□ -0.23
RDM1-218ENST00000615288 LAMC1P11047 1609 aa13.58□□□□□ -0.24
RDM1-218ENST00000615288 KIF7Q2M1P5 1343 aa13.58□□□□□ -0.24
RDM1-218ENST00000615288 DHX29Q7Z478 1369 aaKnown RBP13.58□□□□□ -0.24
RDM1-218ENST00000615288 EIF4G3O43432 1585 aaKnown RBP13.57□□□□□ -0.24
RDM1-218ENST00000615288 CEP170Q5SW79 1584 aa13.57□□□□□ -0.24
RDM1-218ENST00000615288 ANKRD30AQ9BXX3 1397 aa13.57□□□□□ -0.24
RDM1-218ENST00000615288 GPATCH8Q9UKJ3 1502 aaKnown RBP13.56□□□□□ -0.24
RDM1-218ENST00000615288 PTPRGP23470 1445 aa13.56□□□□□ -0.24
RDM1-218ENST00000615288 MRS2Q9HD23 443 aa13.55□□□□□ -0.24
RDM1-218ENST00000615288 CDC42BPAQ5VT25 1732 aa13.54□□□□□ -0.24
RDM1-218ENST00000615288 BCORL1Q5H9F3 1711 aa13.53□□□□□ -0.24
RDM1-218ENST00000615288 USP47Q96K76 1375 aa13.53□□□□□ -0.24
RDM1-218ENST00000615288 CARMIL2Q6F5E8 1435 aa13.52□□□□□ -0.25
RDM1-218ENST00000615288 SYNJ2O15056 1496 aa13.52□□□□□ -0.25
RDM1-218ENST00000615288 ABCA8O94911 1581 aa13.52□□□□□ -0.25
RDM1-218ENST00000615288 NBPF8Q3BBV2 869 aa13.51□□□□□ -0.25
RDM1-218ENST00000615288 ERICH6Q7L0X2 663 aa13.51□□□□□ -0.25
RDM1-218ENST00000615288 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
RDM1-218ENST00000615288 CHIC2Q9UKJ5 165 aa13.51□□□□□ -0.25
RDM1-218ENST00000615288 ABCC10Q5T3U5 1492 aa13.5□□□□□ -0.25
RDM1-218ENST00000615288 NUP160Q12769 1436 aa13.5□□□□□ -0.25
RDM1-218ENST00000615288 BRD4O60885 1362 aaPredicted RBP13.5□□□□□ -0.25
RDM1-218ENST00000615288 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
RDM1-218ENST00000615288 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
RDM1-218ENST00000615288 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
RDM1-218ENST00000615288 LRPPRCP42704 1394 aaKnown RBP13.49□□□□□ -0.25
RDM1-218ENST00000615288 KIF15Q9NS87 1388 aa13.49□□□□□ -0.25
RDM1-218ENST00000615288 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
RDM1-218ENST00000615288 MSH5O43196 834 aa13.48□□□□□ -0.25
RDM1-218ENST00000615288 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
RDM1-218ENST00000615288 EIF2AK4Q9P2K8 1649 aaKnown RBP13.48□□□□□ -0.25
RDM1-218ENST00000615288 UNC13BO14795 1591 aa13.47□□□□□ -0.25
RDM1-218ENST00000615288 PLEKHH2Q8IVE3 1493 aa13.46□□□□□ -0.25
RDM1-218ENST00000615288 C9orf84Q5VXU9 1444 aa13.46□□□□□ -0.26
RDM1-218ENST00000615288 PREX2Q70Z35 1606 aa13.45□□□□□ -0.26
RDM1-218ENST00000615288 PRG4Q92954 1404 aaPredicted RBP13.45□□□□□ -0.26
RDM1-218ENST00000615288 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
RDM1-218ENST00000615288 TRPM1Q7Z4N2 1603 aa13.44□□□□□ -0.26
RDM1-218ENST00000615288 CFDP1Q9UEE9 299 aaPredicted RBP13.44□□□□□ -0.26
RDM1-218ENST00000615288 RALBP1Q15311 655 aa13.43□□□□□ -0.26
RDM1-218ENST00000615288 WASHC2CQ9Y4E1 1318 aa13.42□□□□□ -0.26
RDM1-218ENST00000615288 PLXNC1O60486 1568 aa13.42□□□□□ -0.26
RDM1-218ENST00000615288 CCDC184Q52MB2 194 aa13.42□□□□□ -0.26
RDM1-218ENST00000615288 GPRASP1Q5JY77 1395 aa13.42□□□□□ -0.26
RDM1-218ENST00000615288 PDE3BQ13370 1112 aa13.41□□□□□ -0.26
RDM1-218ENST00000615288 FAM9BQ8IZU0 186 aa13.41□□□□□ -0.26
RDM1-218ENST00000615288 CCDC141Q6ZP82 1450 aa13.41□□□□□ -0.26
RDM1-218ENST00000615288 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
RDM1-218ENST00000615288 PLB1Q6P1J6 1458 aa13.4□□□□□ -0.26
RDM1-218ENST00000615288 PRDM15P57071 1507 aaPredicted RBP13.39□□□□□ -0.27
RDM1-218ENST00000615288 RSPH4AQ5TD94 716 aa13.39□□□□□ -0.27
RDM1-218ENST00000615288 PNISRQ8TF01 805 aaKnown RBP13.39□□□□□ -0.27
RDM1-218ENST00000615288 ATP10AO60312 1499 aa13.39□□□□□ -0.27
RDM1-218ENST00000615288 IQGAP3Q86VI3 1631 aa13.39□□□□□ -0.27
RDM1-218ENST00000615288 RNF17Q9BXT8 1623 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms