RNA–Protein interactions for RNA: ENST00000615234.4

POLR2E-213, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2E, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-213ENST00000615234 FOXD1Q16676 465 aa20.8■□□□□ 0.92
POLR2E-213ENST00000615234 WASHC2AQ641Q2 1341 aa20.79■□□□□ 0.92
POLR2E-213ENST00000615234 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
POLR2E-213ENST00000615234 L3MBTL2Q969R5 705 aa20.79■□□□□ 0.92
POLR2E-213ENST00000615234 CDK11AQ9UQ88 783 aaPredicted RBP20.77■□□□□ 0.92
POLR2E-213ENST00000615234 ANKRD30BQ9BXX2 1392 aa20.77■□□□□ 0.91
POLR2E-213ENST00000615234 FKBP8Q14318 412 aa20.76■□□□□ 0.91
POLR2E-213ENST00000615234 EIF4G2P78344 907 aaKnown RBP eCLIP20.75■□□□□ 0.91
POLR2E-213ENST00000615234 PRG4Q92954 1404 aaPredicted RBP20.74■□□□□ 0.91
POLR2E-213ENST00000615234 RPRD2Q5VT52 1461 aaKnown RBP20.74■□□□□ 0.91
POLR2E-213ENST00000615234 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
POLR2E-213ENST00000615234 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
POLR2E-213ENST00000615234 TROQ12816 1431 aaPredicted RBP20.74■□□□□ 0.91
POLR2E-213ENST00000615234 TSHZ2Q9NRE2 1034 aa20.73■□□□□ 0.91
POLR2E-213ENST00000615234 BCANQ96GW7 911 aa20.72■□□□□ 0.91
POLR2E-213ENST00000615234 PLB1Q6P1J6 1458 aa20.71■□□□□ 0.91
POLR2E-213ENST00000615234 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
POLR2E-213ENST00000615234 TEX14Q8IWB6 1497 aa20.7■□□□□ 0.9
POLR2E-213ENST00000615234 CAMSAP2Q08AD1 1489 aa20.7■□□□□ 0.9
POLR2E-213ENST00000615234 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
POLR2E-213ENST00000615234 ITSN2Q9NZM3 1697 aa20.68■□□□□ 0.9
POLR2E-213ENST00000615234 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
POLR2E-213ENST00000615234 NBPF8Q3BBV2 869 aa20.68■□□□□ 0.9
POLR2E-213ENST00000615234 CFDP1Q9UEE9 299 aaPredicted RBP20.67■□□□□ 0.9
POLR2E-213ENST00000615234 ADCY10Q96PN6 1610 aa20.67■□□□□ 0.9
POLR2E-213ENST00000615234 KIF14Q15058 1648 aa20.67■□□□□ 0.9
POLR2E-213ENST00000615234 CNTLNQ9NXG0 1405 aa20.66■□□□□ 0.9
POLR2E-213ENST00000615234 NCOA1Q15788 1441 aa20.66■□□□□ 0.9
POLR2E-213ENST00000615234 C11orf95C9JLR9 678 aaPredicted RBP20.66■□□□□ 0.9
POLR2E-213ENST00000615234 PZPP20742 1482 aa20.65■□□□□ 0.9
POLR2E-213ENST00000615234 NEFLP07196 543 aa20.65■□□□□ 0.9
POLR2E-213ENST00000615234 ADGBQ8N7X0 1667 aa20.64■□□□□ 0.9
POLR2E-213ENST00000615234 CCDC7Q96M83 1385 aa20.64■□□□□ 0.89
POLR2E-213ENST00000615234 NUP160Q12769 1436 aa20.63■□□□□ 0.89
POLR2E-213ENST00000615234 MYT1Q01538 1121 aa20.63■□□□□ 0.89
POLR2E-213ENST00000615234 CARMIL2Q6F5E8 1435 aa20.62■□□□□ 0.89
POLR2E-213ENST00000615234 ADGRL2O95490 1459 aa20.61■□□□□ 0.89
POLR2E-213ENST00000615234 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
POLR2E-213ENST00000615234 CROCC2H7BZ55 1655 aa20.61■□□□□ 0.89
POLR2E-213ENST00000615234 CHD1O14646 1710 aa20.61■□□□□ 0.89
POLR2E-213ENST00000615234 HNRNPUQ00839 825 aaKnown RBP eCLIP20.6■□□□□ 0.89
POLR2E-213ENST00000615234 SPATA31E1Q6ZUB1 1445 aa20.6■□□□□ 0.89
POLR2E-213ENST00000615234 ZNF777Q9ULD5 760 aaPredicted RBP20.59■□□□□ 0.89
POLR2E-213ENST00000615234 CCDC184Q52MB2 194 aa20.55■□□□□ 0.88
POLR2E-213ENST00000615234 POLR1AO95602 1720 aaPredicted RBP20.55■□□□□ 0.88
POLR2E-213ENST00000615234 PRKRIP1Q9H875 184 aaPredicted RBP20.55■□□□□ 0.88
POLR2E-213ENST00000615234 ABCA8O94911 1581 aa20.55■□□□□ 0.88
POLR2E-213ENST00000615234 KIAA1107Q9UPP5 1409 aa20.55■□□□□ 0.88
POLR2E-213ENST00000615234 ANKRD30AQ9BXX3 1397 aa20.54■□□□□ 0.88
POLR2E-213ENST00000615234 MBD5Q9P267 1494 aa20.54■□□□□ 0.88
POLR2E-213ENST00000615234 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
POLR2E-213ENST00000615234 KIF7Q2M1P5 1343 aa20.53■□□□□ 0.88
POLR2E-213ENST00000615234 ABCC10Q5T3U5 1492 aa20.52■□□□□ 0.87
POLR2E-213ENST00000615234 ATP10BO94823 1461 aa20.51■□□□□ 0.87
POLR2E-213ENST00000615234 PLEKHD1A6NEE1 506 aa20.5■□□□□ 0.87
POLR2E-213ENST00000615234 ANKRD50Q9ULJ7 1429 aa20.5■□□□□ 0.87
POLR2E-213ENST00000615234 PKD2Q13563 968 aa20.49■□□□□ 0.87
POLR2E-213ENST00000615234 OSCARQ8IYS5 282 aa20.49■□□□□ 0.87
POLR2E-213ENST00000615234 SHANK2Q9UPX8 1470 aa20.47■□□□□ 0.87
POLR2E-213ENST00000615234 C9orf84Q5VXU9 1444 aa20.45■□□□□ 0.86
POLR2E-213ENST00000615234 MRS2Q9HD23 443 aa20.44■□□□□ 0.86
POLR2E-213ENST00000615234 BCORL1Q5H9F3 1711 aa20.42■□□□□ 0.86
POLR2E-213ENST00000615234 USP47Q96K76 1375 aa20.42■□□□□ 0.86
POLR2E-213ENST00000615234 NUP155O75694 1391 aa20.41■□□□□ 0.86
POLR2E-213ENST00000615234 FAM9BQ8IZU0 186 aa20.41■□□□□ 0.86
POLR2E-213ENST00000615234 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
POLR2E-213ENST00000615234 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
POLR2E-213ENST00000615234 KDM5CP41229 1560 aa20.39■□□□□ 0.86
POLR2E-213ENST00000615234 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
POLR2E-213ENST00000615234 TSPY4P0CV99 314 aa20.38■□□□□ 0.85
POLR2E-213ENST00000615234 TSPY10P0CW01 314 aa20.38■□□□□ 0.85
POLR2E-213ENST00000615234 DHX29Q7Z478 1369 aaKnown RBP20.38■□□□□ 0.85
POLR2E-213ENST00000615234 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
POLR2E-213ENST00000615234 ARHGEF5Q12774 1597 aa20.37■□□□□ 0.85
POLR2E-213ENST00000615234 ZBED9Q6R2W3 1325 aa20.36■□□□□ 0.85
POLR2E-213ENST00000615234 HNRNPMP52272 730 aaKnown RBP eCLIP20.36■□□□□ 0.85
POLR2E-213ENST00000615234 KIF15Q9NS87 1388 aa20.35■□□□□ 0.85
POLR2E-213ENST00000615234 RALGAPBQ86X10 1494 aa20.35■□□□□ 0.85
POLR2E-213ENST00000615234 PTPRGP23470 1445 aa20.35■□□□□ 0.85
POLR2E-213ENST00000615234 ARHGEF12Q9NZN5 1544 aa20.34■□□□□ 0.85
POLR2E-213ENST00000615234 RBM19Q9Y4C8 960 aaKnown RBP20.34■□□□□ 0.85
POLR2E-213ENST00000615234 ARID4BQ4LE39 1312 aaPredicted RBP20.33■□□□□ 0.84
POLR2E-213ENST00000615234 SAMD9LQ8IVG5 1584 aa20.32■□□□□ 0.84
POLR2E-213ENST00000615234 CDC42BPBQ9Y5S2 1711 aa20.32■□□□□ 0.84
POLR2E-213ENST00000615234 ERCC6L2Q5T890 1561 aa20.31■□□□□ 0.84
POLR2E-213ENST00000615234 PREX2Q70Z35 1606 aa20.3■□□□□ 0.84
POLR2E-213ENST00000615234 ERICH6BQ5W0A0 696 aa20.3■□□□□ 0.84
POLR2E-213ENST00000615234 CCDC141Q6ZP82 1450 aa20.29■□□□□ 0.84
POLR2E-213ENST00000615234 POLR3GLQ9BT43 218 aa20.29■□□□□ 0.84
POLR2E-213ENST00000615234 CARD11Q9BXL7 1154 aa20.28■□□□□ 0.84
POLR2E-213ENST00000615234 CLASP1Q7Z460 1538 aa20.26■□□□□ 0.83
POLR2E-213ENST00000615234 FAM135AQ9P2D6 1515 aa20.25■□□□□ 0.83
POLR2E-213ENST00000615234 ROCK2O75116 1388 aaKnown RBP20.25■□□□□ 0.83
POLR2E-213ENST00000615234 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
POLR2E-213ENST00000615234 ANP32EQ9BTT0 268 aa20.24■□□□□ 0.83
POLR2E-213ENST00000615234 RSPH4AQ5TD94 716 aa20.24■□□□□ 0.83
POLR2E-213ENST00000615234 CNGB1Q14028 1251 aaPredicted RBP20.23■□□□□ 0.83
POLR2E-213ENST00000615234 DCAF11Q8TEB1 546 aa20.23■□□□□ 0.83
POLR2E-213ENST00000615234 PPP4R2Q9NY27 417 aa20.23■□□□□ 0.83
POLR2E-213ENST00000615234 ST20-MTHFSA0A0A6YYL1 179 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms