RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 TOP2BQ02880 1626 aa9.89□□□□□ -0.83
CDKAL1-204ENST00000613575 CHGAP10645 457 aaKnown RBP9.89□□□□□ -0.83
CDKAL1-204ENST00000613575 VGFO15240 615 aaPredicted RBP9.88□□□□□ -0.83
CDKAL1-204ENST00000613575 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
CDKAL1-204ENST00000613575 IFNL1Q8IU54 200 aa9.87□□□□□ -0.83
CDKAL1-204ENST00000613575 SGIP1Q9BQI5 828 aa9.87□□□□□ -0.83
CDKAL1-204ENST00000613575 PRXQ9BXM0 1461 aa9.84□□□□□ -0.83
CDKAL1-204ENST00000613575 BIVM-ERCC5R4GMW8 1640 aa9.84□□□□□ -0.83
CDKAL1-204ENST00000613575 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.83□□□□□ -0.84
CDKAL1-204ENST00000613575 STK25O00506 426 aa9.83□□□□□ -0.84
CDKAL1-204ENST00000613575 CLIP1P30622 1438 aa9.83□□□□□ -0.84
CDKAL1-204ENST00000613575 ZFP91Q96JP5 570 aaPredicted RBP9.83□□□□□ -0.84
CDKAL1-204ENST00000613575 RAPGEF2Q9Y4G8 1499 aa9.83□□□□□ -0.84
CDKAL1-204ENST00000613575 NEUROD1Q13562 356 aa9.83□□□□□ -0.84
CDKAL1-204ENST00000613575 PDAP1Q13442 181 aaKnown RBP9.82□□□□□ -0.84
CDKAL1-204ENST00000613575 MS4A3Q96HJ5 214 aa9.82□□□□□ -0.84
CDKAL1-204ENST00000613575 CADPSQ9ULU8 1353 aa9.82□□□□□ -0.84
CDKAL1-204ENST00000613575 PSEN1P49768 467 aa9.81□□□□□ -0.84
CDKAL1-204ENST00000613575 VPS8Q8N3P4 1428 aa9.81□□□□□ -0.84
CDKAL1-204ENST00000613575 STK24Q9Y6E0 443 aa9.8□□□□□ -0.84
CDKAL1-204ENST00000613575 CUX1P39880 1505 aa9.8□□□□□ -0.84
CDKAL1-204ENST00000613575 ERICH3Q5RHP9 1530 aa9.8□□□□□ -0.84
CDKAL1-204ENST00000613575 HS6ST3Q8IZP7 471 aa9.8□□□□□ -0.84
CDKAL1-204ENST00000613575 KIF27Q86VH2 1401 aa9.79□□□□□ -0.84
CDKAL1-204ENST00000613575 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
CDKAL1-204ENST00000613575 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
CDKAL1-204ENST00000613575 BBXQ8WY36 941 aaPredicted RBP9.78□□□□□ -0.84
CDKAL1-204ENST00000613575 CC2D2AQ9P2K1 1620 aa9.78□□□□□ -0.84
CDKAL1-204ENST00000613575 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.84
CDKAL1-204ENST00000613575 FAM163AQ96GL9 167 aaPredicted RBP9.77□□□□□ -0.85
CDKAL1-204ENST00000613575 PODXL2Q9NZ53 605 aa9.76□□□□□ -0.85
CDKAL1-204ENST00000613575 METRNQ9UJH8 293 aa9.76□□□□□ -0.85
CDKAL1-204ENST00000613575 IGF1RP08069 1367 aa9.75□□□□□ -0.85
CDKAL1-204ENST00000613575 TRPC6Q9Y210 931 aa9.74□□□□□ -0.85
CDKAL1-204ENST00000613575 MAMSTRQ6ZN01 415 aa9.73□□□□□ -0.85
CDKAL1-204ENST00000613575 TMEM106CQ9BVX2 250 aa9.73□□□□□ -0.85
CDKAL1-204ENST00000613575 ASTLQ6HA08 431 aaPredicted RBP9.72□□□□□ -0.85
CDKAL1-204ENST00000613575 RANGAP1P46060 587 aaPredicted RBP9.71□□□□□ -0.86
CDKAL1-204ENST00000613575 C7P10643 843 aa9.7□□□□□ -0.86
CDKAL1-204ENST00000613575 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
CDKAL1-204ENST00000613575 PAXIP1Q6ZW49 1069 aaPredicted RBP9.7□□□□□ -0.86
CDKAL1-204ENST00000613575 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
CDKAL1-204ENST00000613575 CABP2Q9NPB3 220 aa9.7□□□□□ -0.86
CDKAL1-204ENST00000613575 TIE1P35590 1138 aa9.69□□□□□ -0.86
CDKAL1-204ENST00000613575 ANO8Q9HCE9 1232 aaPredicted RBP9.69□□□□□ -0.86
CDKAL1-204ENST00000613575 SLC39A7Q92504 469 aa9.68□□□□□ -0.86
CDKAL1-204ENST00000613575 PKNOX2Q96KN3 472 aa9.68□□□□□ -0.86
CDKAL1-204ENST00000613575 ARAP1Q96P48 1450 aa9.68□□□□□ -0.86
CDKAL1-204ENST00000613575 ATMINO43313 823 aaPredicted RBP9.67□□□□□ -0.86
CDKAL1-204ENST00000613575 PLCB2Q00722 1185 aa9.67□□□□□ -0.86
CDKAL1-204ENST00000613575 MYT1LQ9UL68 1186 aa9.67□□□□□ -0.86
CDKAL1-204ENST00000613575 ERICH6BQ5W0A0 696 aa9.67□□□□□ -0.86
CDKAL1-204ENST00000613575 SPRYD3Q8NCJ5 442 aa9.67□□□□□ -0.86
CDKAL1-204ENST00000613575 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
CDKAL1-204ENST00000613575 CARMIL1Q5VZK9 1371 aa9.66□□□□□ -0.86
CDKAL1-204ENST00000613575 TTLL13PA6NNM8 815 aa9.66□□□□□ -0.86
CDKAL1-204ENST00000613575 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
CDKAL1-204ENST00000613575 NKX1-1Q15270 411 aaPredicted RBP9.65□□□□□ -0.86
CDKAL1-204ENST00000613575 EFCAB3Q8N7B9 438 aa9.64□□□□□ -0.87
CDKAL1-204ENST00000613575 ARXQ96QS3 562 aa9.64□□□□□ -0.87
CDKAL1-204ENST00000613575 FGD5Q6ZNL6 1462 aa9.63□□□□□ -0.87
CDKAL1-204ENST00000613575 FANCD2Q9BXW9 1451 aa9.63□□□□□ -0.87
CDKAL1-204ENST00000613575 ARHGAP35Q9NRY4 1499 aa9.63□□□□□ -0.87
CDKAL1-204ENST00000613575 CLSPNQ9HAW4 1339 aa9.63□□□□□ -0.87
CDKAL1-204ENST00000613575 MKRN3Q13064 507 aaKnown RBP9.63□□□□□ -0.87
CDKAL1-204ENST00000613575 KANK4Q5T7N3 995 aaPredicted RBP9.63□□□□□ -0.87
CDKAL1-204ENST00000613575 PRDM2Q13029 1718 aa9.63□□□□□ -0.87
CDKAL1-204ENST00000613575 SCUBE2Q9NQ36 999 aa9.62□□□□□ -0.87
CDKAL1-204ENST00000613575 TRIM35Q9UPQ4 493 aa9.61□□□□□ -0.87
CDKAL1-204ENST00000613575 MAP3K1Q13233 1512 aa9.61□□□□□ -0.87
CDKAL1-204ENST00000613575 RRBP1Q9P2E9 1410 aaKnown RBP9.6□□□□□ -0.87
CDKAL1-204ENST00000613575 ATN1P54259 1190 aaPredicted RBP9.6□□□□□ -0.87
CDKAL1-204ENST00000613575 RYDENQ9NUL5 291 aaKnown RBP9.6□□□□□ -0.87
CDKAL1-204ENST00000613575 ABCA10Q8WWZ4 1543 aa9.6□□□□□ -0.87
CDKAL1-204ENST00000613575 SOX12O15370 315 aa9.59□□□□□ -0.87
CDKAL1-204ENST00000613575 HAP1P54257 671 aaPredicted RBP9.59□□□□□ -0.87
CDKAL1-204ENST00000613575 GTPBP6O43824 516 aaPredicted RBP9.58□□□□□ -0.88
CDKAL1-204ENST00000613575 NEFLP07196 543 aa9.58□□□□□ -0.88
CDKAL1-204ENST00000613575 POTEFA5A3E0 1075 aa9.58□□□□□ -0.88
CDKAL1-204ENST00000613575 ZNF316A6NFI3 1004 aaPredicted RBP9.58□□□□□ -0.88
CDKAL1-204ENST00000613575 DNMBPQ6XZF7 1577 aa9.57□□□□□ -0.88
CDKAL1-204ENST00000613575 DIEXFQ68CQ4 756 aaKnown RBP9.57□□□□□ -0.88
CDKAL1-204ENST00000613575 MFRPQ9BY79 579 aa9.57□□□□□ -0.88
CDKAL1-204ENST00000613575 PHF8Q9UPP1 1060 aa9.57□□□□□ -0.88
CDKAL1-204ENST00000613575 TOPBP1Q92547 1522 aa9.57□□□□□ -0.88
CDKAL1-204ENST00000613575 NLRP6P59044 892 aa9.56□□□□□ -0.88
CDKAL1-204ENST00000613575 POLA1P09884 1462 aaPredicted RBP9.55□□□□□ -0.88
CDKAL1-204ENST00000613575 LAMC3Q9Y6N6 1575 aa9.54□□□□□ -0.88
CDKAL1-204ENST00000613575 CCNB3Q8WWL7 1395 aa9.54□□□□□ -0.88
CDKAL1-204ENST00000613575 FHAD1B1AJZ9 1412 aa9.53□□□□□ -0.88
CDKAL1-204ENST00000613575 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.53□□□□□ -0.888e-9■■■□□ 15.1
CDKAL1-204ENST00000613575 PDS5BQ9NTI5 1447 aa9.53□□□□□ -0.88
CDKAL1-204ENST00000613575 RAD54L2Q9Y4B4 1467 aa9.53□□□□□ -0.88
CDKAL1-204ENST00000613575 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
CDKAL1-204ENST00000613575 DHX57Q6P158 1386 aaKnown RBP9.52□□□□□ -0.89
CDKAL1-204ENST00000613575 NESP48681 1621 aa9.52□□□□□ -0.89
CDKAL1-204ENST00000613575 SOCS7O14512 581 aa9.51□□□□□ -0.89
CDKAL1-204ENST00000613575 FBXO22Q8NEZ5 403 aa9.51□□□□□ -0.89
CDKAL1-204ENST00000613575 AQRO60306 1485 aaKnown RBP eCLIP9.49□□□□□ -0.893e-15■■■■■ 31.2
CDKAL1-204ENST00000613575 URB2Q14146 1524 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms