RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 RICTORQ6R327 1708 aa12.76□□□□□ -0.37
PTCHD3P1-201ENST00000612350 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
PTCHD3P1-201ENST00000612350 PTPRTO14522 1441 aa12.76□□□□□ -0.37
PTCHD3P1-201ENST00000612350 FHOD3Q2V2M9 1422 aa12.76□□□□□ -0.37
PTCHD3P1-201ENST00000612350 GOLGA3Q08378 1498 aa12.76□□□□□ -0.37
PTCHD3P1-201ENST00000612350 FER1L4A9Z1Z3 1794 aa12.75□□□□□ -0.37
PTCHD3P1-201ENST00000612350 DENND4BO75064 1496 aaPredicted RBP12.75□□□□□ -0.37
PTCHD3P1-201ENST00000612350 MLECQ14165 292 aa12.75□□□□□ -0.37
PTCHD3P1-201ENST00000612350 AKNAQ7Z591 1439 aa12.75□□□□□ -0.37
PTCHD3P1-201ENST00000612350 CEBPAP49715 358 aaPredicted RBP12.74□□□□□ -0.37
PTCHD3P1-201ENST00000612350 SETD1BQ9UPS6 1966 aaKnown RBP12.72□□□□□ -0.37
PTCHD3P1-201ENST00000612350 ZMYM4Q5VZL5 1548 aa12.71□□□□□ -0.38
PTCHD3P1-201ENST00000612350 ZFYVE16Q7Z3T8 1539 aa12.7□□□□□ -0.38
PTCHD3P1-201ENST00000612350 ARHGEF12Q9NZN5 1544 aa12.7□□□□□ -0.38
PTCHD3P1-201ENST00000612350 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
PTCHD3P1-201ENST00000612350 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
PTCHD3P1-201ENST00000612350 MAGI2Q86UL8 1455 aa12.68□□□□□ -0.38
PTCHD3P1-201ENST00000612350 UHRF1BP1Q6BDS2 1440 aa12.68□□□□□ -0.38
PTCHD3P1-201ENST00000612350 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
PTCHD3P1-201ENST00000612350 UBAP1LF5GYI3 381 aa12.65□□□□□ -0.38
PTCHD3P1-201ENST00000612350 HECW1Q76N89 1606 aa12.65□□□□□ -0.38
PTCHD3P1-201ENST00000612350 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
PTCHD3P1-201ENST00000612350 ATP10AO60312 1499 aa12.62□□□□□ -0.39
PTCHD3P1-201ENST00000612350 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
PTCHD3P1-201ENST00000612350 P3H3Q8IVL6 736 aa12.62□□□□□ -0.39
PTCHD3P1-201ENST00000612350 FAM9AQ8IZU1 332 aaPredicted RBP12.61□□□□□ -0.39
PTCHD3P1-201ENST00000612350 NCOA1Q15788 1441 aa12.61□□□□□ -0.39
PTCHD3P1-201ENST00000612350 CFAP74Q9C0B2 1584 aa12.6□□□□□ -0.39
PTCHD3P1-201ENST00000612350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.6□□□□□ -0.39
PTCHD3P1-201ENST00000612350 HNRNPUL2Q1KMD3 747 aaKnown RBP12.6□□□□□ -0.39
PTCHD3P1-201ENST00000612350 C9orf84Q5VXU9 1444 aa12.6□□□□□ -0.39
PTCHD3P1-201ENST00000612350 HSPA1LP34931 641 aa12.59□□□□□ -0.39
PTCHD3P1-201ENST00000612350 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
PTCHD3P1-201ENST00000612350 RAPGEF6Q8TEU7 1601 aa12.59□□□□□ -0.39
PTCHD3P1-201ENST00000612350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTCHD3P1-201ENST00000612350 SCAPERQ9BY12 1400 aa12.57□□□□□ -0.4
PTCHD3P1-201ENST00000612350 NUP153P49790 1475 aaKnown RBP12.57□□□□□ -0.4
PTCHD3P1-201ENST00000612350 PLEKHD1A6NEE1 506 aa12.56□□□□□ -0.4
PTCHD3P1-201ENST00000612350 C3P01024 1663 aa12.56□□□□□ -0.4
PTCHD3P1-201ENST00000612350 TRAPPC8Q9Y2L5 1435 aa12.55□□□□□ -0.4
PTCHD3P1-201ENST00000612350 CAMSAP1Q5T5Y3 1602 aa12.52□□□□□ -0.4
PTCHD3P1-201ENST00000612350 NCKAP5LQ9HCH0 1330 aa12.52□□□□□ -0.41
PTCHD3P1-201ENST00000612350 PRXQ9BXM0 1461 aa12.52□□□□□ -0.41
PTCHD3P1-201ENST00000612350 SAMD9Q5K651 1589 aa12.51□□□□□ -0.41
PTCHD3P1-201ENST00000612350 PLCH2O75038 1416 aa12.5□□□□□ -0.41
PTCHD3P1-201ENST00000612350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTCHD3P1-201ENST00000612350 PIP4K2BP78356 416 aa12.47□□□□□ -0.41
PTCHD3P1-201ENST00000612350 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
PTCHD3P1-201ENST00000612350 TOM1O60784 492 aa12.46□□□□□ -0.41
PTCHD3P1-201ENST00000612350 PKD2Q13563 968 aa12.46□□□□□ -0.41
PTCHD3P1-201ENST00000612350 AFAP1Q8N556 730 aa12.46□□□□□ -0.41
PTCHD3P1-201ENST00000612350 RGS17Q9UGC6 210 aaPredicted RBP12.45□□□□□ -0.42
PTCHD3P1-201ENST00000612350 AGLP35573 1532 aa12.45□□□□□ -0.42
PTCHD3P1-201ENST00000612350 DIP2CQ9Y2E4 1556 aa12.44□□□□□ -0.42
PTCHD3P1-201ENST00000612350 EFCAB2Q5VUJ9 269 aa12.44□□□□□ -0.42
PTCHD3P1-201ENST00000612350 NPATQ14207 1427 aa12.44□□□□□ -0.42
PTCHD3P1-201ENST00000612350 KDM5CP41229 1560 aa12.43□□□□□ -0.42
PTCHD3P1-201ENST00000612350 PLA2R1Q13018 1463 aa12.43□□□□□ -0.42
PTCHD3P1-201ENST00000612350 TCOF1Q13428 1488 aaKnown RBP12.43□□□□□ -0.42
PTCHD3P1-201ENST00000612350 ZNF518AQ6AHZ1 1483 aa12.43□□□□□ -0.42
PTCHD3P1-201ENST00000612350 ESF1Q9H501 851 aaKnown RBP12.43□□□□□ -0.42
PTCHD3P1-201ENST00000612350 CNTLNQ9NXG0 1405 aa12.42□□□□□ -0.42
PTCHD3P1-201ENST00000612350 ALKQ9UM73 1620 aa12.4□□□□□ -0.42
PTCHD3P1-201ENST00000612350 ABCA6Q8N139 1617 aa12.4□□□□□ -0.42
PTCHD3P1-201ENST00000612350 KCNA4P22459 653 aa12.39□□□□□ -0.43
PTCHD3P1-201ENST00000612350 ZMYM3Q14202 1370 aa12.39□□□□□ -0.43
PTCHD3P1-201ENST00000612350 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
PTCHD3P1-201ENST00000612350 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
PTCHD3P1-201ENST00000612350 MYO5CQ9NQX4 1742 aa12.37□□□□□ -0.43
PTCHD3P1-201ENST00000612350 MROH2AA6NES4 1674 aa12.37□□□□□ -0.43
PTCHD3P1-201ENST00000612350 ZNF142P52746 1687 aaPredicted RBP12.37□□□□□ -0.43
PTCHD3P1-201ENST00000612350 CPS1P31327 1500 aa12.37□□□□□ -0.43
PTCHD3P1-201ENST00000612350 CDK13Q14004 1512 aaKnown RBP12.36□□□□□ -0.43
PTCHD3P1-201ENST00000612350 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
PTCHD3P1-201ENST00000612350 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
PTCHD3P1-201ENST00000612350 SUPT6HQ7KZ85 1726 aaKnown RBP12.34□□□□□ -0.43
PTCHD3P1-201ENST00000612350 MYO3AQ8NEV4 1616 aa12.34□□□□□ -0.43
PTCHD3P1-201ENST00000612350 PTPRKQ15262 1439 aa12.34□□□□□ -0.43
PTCHD3P1-201ENST00000612350 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
PTCHD3P1-201ENST00000612350 RANGAP1P46060 587 aaPredicted RBP12.31□□□□□ -0.44
PTCHD3P1-201ENST00000612350 ARHGAP5Q13017 1502 aa12.31□□□□□ -0.44
PTCHD3P1-201ENST00000612350 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
PTCHD3P1-201ENST00000612350 KIF14Q15058 1648 aa12.29□□□□□ -0.44
PTCHD3P1-201ENST00000612350 NEURL4Q96JN8 1562 aa12.29□□□□□ -0.44
PTCHD3P1-201ENST00000612350 VWDEQ8N2E2 1590 aa12.28□□□□□ -0.44
PTCHD3P1-201ENST00000612350 DNMT1P26358 1616 aaKnown RBP12.28□□□□□ -0.44
PTCHD3P1-201ENST00000612350 CLTCQ00610 1675 aaKnown RBP12.27□□□□□ -0.45
PTCHD3P1-201ENST00000612350 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.45
PTCHD3P1-201ENST00000612350 CDC42BPBQ9Y5S2 1711 aa12.26□□□□□ -0.45
PTCHD3P1-201ENST00000612350 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
PTCHD3P1-201ENST00000612350 ABCC1P33527 1531 aa12.25□□□□□ -0.45
PTCHD3P1-201ENST00000612350 CSRNP3Q8WYN3 585 aa12.24□□□□□ -0.45
PTCHD3P1-201ENST00000612350 ITSN2Q9NZM3 1697 aa12.24□□□□□ -0.45
PTCHD3P1-201ENST00000612350 TROQ12816 1431 aaPredicted RBP12.23□□□□□ -0.45
PTCHD3P1-201ENST00000612350 CDK11AQ9UQ88 783 aaPredicted RBP12.23□□□□□ -0.45
PTCHD3P1-201ENST00000612350 LRRC7Q96NW7 1537 aa12.21□□□□□ -0.45
PTCHD3P1-201ENST00000612350 STRCP1A6NGW2 1772 aa12.21□□□□□ -0.45
PTCHD3P1-201ENST00000612350 SETD1AO15047 1707 aaKnown RBP12.21□□□□□ -0.45
PTCHD3P1-201ENST00000612350 ANKLE2Q86XL3 938 aa12.2□□□□□ -0.46
PTCHD3P1-201ENST00000612350 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms