RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 STRCQ7RTU9 1775 aa23.37■■□□□ 1.33
LINC00116-203ENST00000611969 PLEKHD1A6NEE1 506 aa23.37■■□□□ 1.33
LINC00116-203ENST00000611969 CSRNP3Q8WYN3 585 aa23.36■■□□□ 1.33
LINC00116-203ENST00000611969 MYO5CQ9NQX4 1742 aa23.35■■□□□ 1.33
LINC00116-203ENST00000611969 SCAPERQ9BY12 1400 aa23.32■■□□□ 1.32
LINC00116-203ENST00000611969 C9orf84Q5VXU9 1444 aa23.3■■□□□ 1.32
LINC00116-203ENST00000611969 PLCH2O75038 1416 aa23.29■■□□□ 1.32
LINC00116-203ENST00000611969 ATP10AO60312 1499 aa23.29■■□□□ 1.32
LINC00116-203ENST00000611969 ILDR2Q71H61 639 aa23.28■■□□□ 1.32
LINC00116-203ENST00000611969 KIF14Q15058 1648 aa23.27■■□□□ 1.32
LINC00116-203ENST00000611969 DISP3Q9P2K9 1392 aa23.27■■□□□ 1.31
LINC00116-203ENST00000611969 SPATA31D1Q6ZQQ2 1576 aa23.24■■□□□ 1.31
LINC00116-203ENST00000611969 CEBPAP49715 358 aaPredicted RBP23.24■■□□□ 1.31
LINC00116-203ENST00000611969 KDM5CP41229 1560 aa23.23■■□□□ 1.31
LINC00116-203ENST00000611969 C3P01024 1663 aa23.22■■□□□ 1.31
LINC00116-203ENST00000611969 DIP2CQ9Y2E4 1556 aa23.22■■□□□ 1.31
LINC00116-203ENST00000611969 ABCA6Q8N139 1617 aa23.2■■□□□ 1.3
LINC00116-203ENST00000611969 EEA1Q15075 1411 aa23.2■■□□□ 1.3
LINC00116-203ENST00000611969 UHRF1BP1Q6BDS2 1440 aa23.18■■□□□ 1.3
LINC00116-203ENST00000611969 LRRIQ1Q96JM4 1722 aa23.18■■□□□ 1.3
LINC00116-203ENST00000611969 ZNF518AQ6AHZ1 1483 aa23.17■■□□□ 1.3
LINC00116-203ENST00000611969 SETD1BQ9UPS6 1966 aaKnown RBP23.16■■□□□ 1.3
LINC00116-203ENST00000611969 REREQ9P2R6 1566 aa23.15■■□□□ 1.3
LINC00116-203ENST00000611969 ARHGAP5Q13017 1502 aa23.15■■□□□ 1.3
LINC00116-203ENST00000611969 SOCS7O14512 581 aa23.15■■□□□ 1.3
LINC00116-203ENST00000611969 CDC42BPBQ9Y5S2 1711 aa23.13■■□□□ 1.29
LINC00116-203ENST00000611969 LTBP4Q8N2S1 1624 aa23.12■■□□□ 1.29
LINC00116-203ENST00000611969 EFCAB2Q5VUJ9 269 aa23.11■■□□□ 1.29
LINC00116-203ENST00000611969 DMRT2Q9Y5R5 561 aa23.09■■□□□ 1.29
LINC00116-203ENST00000611969 ITSN2Q9NZM3 1697 aa23.09■■□□□ 1.29
LINC00116-203ENST00000611969 PTPRTO14522 1441 aa23.08■■□□□ 1.29
LINC00116-203ENST00000611969 AFAP1Q8N556 730 aa23.08■■□□□ 1.29
LINC00116-203ENST00000611969 PREX2Q70Z35 1606 aa23.07■■□□□ 1.28
LINC00116-203ENST00000611969 ARHGAP35Q9NRY4 1499 aa23.06■■□□□ 1.28
LINC00116-203ENST00000611969 ABCC1P33527 1531 aa23.06■■□□□ 1.28
LINC00116-203ENST00000611969 TROQ12816 1431 aaPredicted RBP23.06■■□□□ 1.28
LINC00116-203ENST00000611969 FMN1Q68DA7 1419 aa23.06■■□□□ 1.28
LINC00116-203ENST00000611969 AGLP35573 1532 aa23.04■■□□□ 1.28
LINC00116-203ENST00000611969 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
LINC00116-203ENST00000611969 KIDINS220Q9ULH0 1771 aa23.04■■□□□ 1.28
LINC00116-203ENST00000611969 MLH3Q9UHC1 1453 aa23.03■■□□□ 1.28
LINC00116-203ENST00000611969 NCOA1Q15788 1441 aa23.02■■□□□ 1.28
LINC00116-203ENST00000611969 IQSEC2Q5JU85 1478 aa23■■□□□ 1.27
LINC00116-203ENST00000611969 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
LINC00116-203ENST00000611969 MYT1LQ9UL68 1186 aa22.99■■□□□ 1.27
LINC00116-203ENST00000611969 CLIP1P30622 1438 aa22.99■■□□□ 1.27
LINC00116-203ENST00000611969 MROH2AA6NES4 1674 aa22.98■■□□□ 1.27
LINC00116-203ENST00000611969 CDC42BPAQ5VT25 1732 aa22.98■■□□□ 1.27
LINC00116-203ENST00000611969 CAMSAP1Q5T5Y3 1602 aa22.97■■□□□ 1.27
LINC00116-203ENST00000611969 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
LINC00116-203ENST00000611969 CDK11AQ9UQ88 783 aaPredicted RBP22.95■■□□□ 1.26
LINC00116-203ENST00000611969 SUPT6HQ7KZ85 1726 aaKnown RBP22.92■■□□□ 1.26
LINC00116-203ENST00000611969 ZNF142P52746 1687 aaPredicted RBP22.92■■□□□ 1.26
LINC00116-203ENST00000611969 MYO3AQ8NEV4 1616 aa22.92■■□□□ 1.26
LINC00116-203ENST00000611969 CNTLNQ9NXG0 1405 aa22.91■■□□□ 1.26
LINC00116-203ENST00000611969 CLTCQ00610 1675 aaKnown RBP22.9■■□□□ 1.26
LINC00116-203ENST00000611969 SAMD9LQ8IVG5 1584 aa22.89■■□□□ 1.26
LINC00116-203ENST00000611969 ESF1Q9H501 851 aaKnown RBP22.88■■□□□ 1.25
LINC00116-203ENST00000611969 NPATQ14207 1427 aa22.88■■□□□ 1.25
LINC00116-203ENST00000611969 UBTFP17480 764 aaKnown RBP22.87■■□□□ 1.25
LINC00116-203ENST00000611969 SYCP2Q9BX26 1530 aa22.85■■□□□ 1.25
LINC00116-203ENST00000611969 ZNF335Q9H4Z2 1342 aaPredicted RBP22.83■■□□□ 1.25
LINC00116-203ENST00000611969 CCDC18Q5T9S5 1454 aa22.83■■□□□ 1.25
LINC00116-203ENST00000611969 PLXNC1O60486 1568 aa22.83■■□□□ 1.25
LINC00116-203ENST00000611969 CEP170BQ9Y4F5 1589 aaPredicted RBP22.83■■□□□ 1.25
LINC00116-203ENST00000611969 INO80Q9ULG1 1556 aaPredicted RBP22.81■■□□□ 1.24
LINC00116-203ENST00000611969 NCKAP5LQ9HCH0 1330 aa22.81■■□□□ 1.24
LINC00116-203ENST00000611969 ATP7AQ04656 1500 aa22.79■■□□□ 1.24
LINC00116-203ENST00000611969 CASKIN1Q8WXD9 1431 aa22.79■■□□□ 1.24
LINC00116-203ENST00000611969 PLA2R1Q13018 1463 aa22.79■■□□□ 1.24
LINC00116-203ENST00000611969 ZMYM3Q14202 1370 aa22.78■■□□□ 1.24
LINC00116-203ENST00000611969 TCOF1Q13428 1488 aaKnown RBP22.78■■□□□ 1.24
LINC00116-203ENST00000611969 UBAP1LF5GYI3 381 aa22.76■■□□□ 1.23
LINC00116-203ENST00000611969 PTPRKQ15262 1439 aa22.74■■□□□ 1.23
LINC00116-203ENST00000611969 POLR1AO95602 1720 aaPredicted RBP22.73■■□□□ 1.23
LINC00116-203ENST00000611969 MED1Q15648 1581 aaPredicted RBP22.72■■□□□ 1.23
LINC00116-203ENST00000611969 GPATCH8Q9UKJ3 1502 aaKnown RBP22.72■■□□□ 1.23
LINC00116-203ENST00000611969 A2MP01023 1474 aa22.71■■□□□ 1.23
LINC00116-203ENST00000611969 ADGBQ8N7X0 1667 aa22.71■■□□□ 1.23
LINC00116-203ENST00000611969 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.22
LINC00116-203ENST00000611969 SPAG9O60271 1321 aaKnown RBP22.7■■□□□ 1.22
LINC00116-203ENST00000611969 FYCO1Q9BQS8 1478 aa22.7■■□□□ 1.22
LINC00116-203ENST00000611969 DNMT1P26358 1616 aaKnown RBP22.69■■□□□ 1.22
LINC00116-203ENST00000611969 NEURL4Q96JN8 1562 aa22.67■■□□□ 1.22
LINC00116-203ENST00000611969 PKD2Q13563 968 aa22.67■■□□□ 1.22
LINC00116-203ENST00000611969 HNRNPMP52272 730 aaKnown RBP eCLIP22.66■■□□□ 1.22
LINC00116-203ENST00000611969 A2ML1A8K2U0 1454 aa22.64■■□□□ 1.21
LINC00116-203ENST00000611969 PPP6R1Q9UPN7 881 aa22.63■■□□□ 1.21
LINC00116-203ENST00000611969 KIAA1107Q9UPP5 1409 aa22.63■■□□□ 1.21
LINC00116-203ENST00000611969 PLEKHH2Q8IVE3 1493 aa22.61■■□□□ 1.21
LINC00116-203ENST00000611969 HSPA1LP34931 641 aa22.6■■□□□ 1.21
LINC00116-203ENST00000611969 GGT6Q6P531 493 aa22.59■■□□□ 1.21
LINC00116-203ENST00000611969 CPS1P31327 1500 aa22.58■■□□□ 1.21
LINC00116-203ENST00000611969 ALKQ9UM73 1620 aa22.57■■□□□ 1.2
LINC00116-203ENST00000611969 TIAM1Q13009 1591 aa22.57■■□□□ 1.2
LINC00116-203ENST00000611969 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
LINC00116-203ENST00000611969 VWDEQ8N2E2 1590 aa22.55■■□□□ 1.2
LINC00116-203ENST00000611969 PIP4K2BP78356 416 aa22.55■■□□□ 1.2
LINC00116-203ENST00000611969 SHANK2Q9UPX8 1470 aa22.54■■□□□ 1.2
LINC00116-203ENST00000611969 CCNB3Q8WWL7 1395 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms