RNA–Protein interactions for RNA: ENST00000611745.1

SRRM3-204, Transcript of serine/arginine repetitive matrix 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRRM3, Length 3,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-204ENST00000611745 ZNF777Q9ULD5 760 aaPredicted RBP25.05■■□□□ 1.6
SRRM3-204ENST00000611745 SMG6Q86US8 1419 aaKnown RBP25.04■■□□□ 1.6
SRRM3-204ENST00000611745 WASHC2CQ9Y4E1 1318 aa25.02■■□□□ 1.6
SRRM3-204ENST00000611745 MS4A1P11836 297 aa25■■□□□ 1.59
SRRM3-204ENST00000611745 IGF1RP08069 1367 aa25■■□□□ 1.59
SRRM3-204ENST00000611745 CC2D1BQ5T0F9 858 aaKnown RBP25■■□□□ 1.59
SRRM3-204ENST00000611745 PNNQ9H307 717 aaKnown RBP25■■□□□ 1.59
SRRM3-204ENST00000611745 UACAQ9BZF9 1416 aa24.98■■□□□ 1.59
SRRM3-204ENST00000611745 CARD11Q9BXL7 1154 aa24.97■■□□□ 1.59
SRRM3-204ENST00000611745 HSP90AA2PQ14568 343 aaPredicted RBP24.97■■□□□ 1.59
SRRM3-204ENST00000611745 FMN1Q68DA7 1419 aa24.97■■□□□ 1.59
SRRM3-204ENST00000611745 PNISRQ8TF01 805 aaKnown RBP24.96■■□□□ 1.59
SRRM3-204ENST00000611745 CANXP27824 592 aaKnown RBP24.95■■□□□ 1.59
SRRM3-204ENST00000611745 ERICH3Q5RHP9 1530 aa24.95■■□□□ 1.58
SRRM3-204ENST00000611745 HSP90AA1P07900 732 aaKnown RBP24.94■■□□□ 1.58
SRRM3-204ENST00000611745 POGKQ9P215 609 aa24.93■■□□□ 1.58
SRRM3-204ENST00000611745 DCAF11Q8TEB1 546 aa24.92■■□□□ 1.58
SRRM3-204ENST00000611745 FAM43AQ8N2R8 423 aa24.92■■□□□ 1.58
SRRM3-204ENST00000611745 TIAM1Q13009 1591 aa24.89■■□□□ 1.58
SRRM3-204ENST00000611745 ZMYND15Q9H091 742 aa24.87■■□□□ 1.57
SRRM3-204ENST00000611745 TOP2BQ02880 1626 aa24.87■■□□□ 1.57
SRRM3-204ENST00000611745 FGD6Q6ZV73 1430 aa24.86■■□□□ 1.57
SRRM3-204ENST00000611745 FAM161AQ3B820 660 aa24.86■■□□□ 1.57
SRRM3-204ENST00000611745 BECN1Q14457 450 aa24.86■■□□□ 1.57
SRRM3-204ENST00000611745 ARID3AQ99856 593 aa24.85■■□□□ 1.57
SRRM3-204ENST00000611745 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.57
SRRM3-204ENST00000611745 C20orf194Q5TEA3 1177 aa24.84■■□□□ 1.57
SRRM3-204ENST00000611745 UPF2Q9HAU5 1272 aaKnown RBP24.82■■□□□ 1.56
SRRM3-204ENST00000611745 L1TD1Q5T7N2 865 aaKnown RBP24.81■■□□□ 1.56
SRRM3-204ENST00000611745 CUX1P39880 1505 aa24.79■■□□□ 1.56
SRRM3-204ENST00000611745 ST20-MTHFSA0A0A6YYL1 179 aa24.79■■□□□ 1.56
SRRM3-204ENST00000611745 TRIM44Q96DX7 344 aaPredicted RBP24.79■■□□□ 1.56
SRRM3-204ENST00000611745 RGL3Q3MIN7 710 aa24.78■■□□□ 1.56
SRRM3-204ENST00000611745 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.78■■□□□ 1.56
SRRM3-204ENST00000611745 PTPRKQ15262 1439 aa24.78■■□□□ 1.56
SRRM3-204ENST00000611745 WDR43Q15061 677 aaKnown RBP eCLIP24.76■■□□□ 1.55
SRRM3-204ENST00000611745 RRAGDQ9NQL2 400 aaPredicted RBP24.76■■□□□ 1.55
SRRM3-204ENST00000611745 GOLGA6L3A6NEY3 463 aa24.75■■□□□ 1.55
SRRM3-204ENST00000611745 USP47Q96K76 1375 aa24.75■■□□□ 1.55
SRRM3-204ENST00000611745 NCOA1Q15788 1441 aa24.75■■□□□ 1.55
SRRM3-204ENST00000611745 NAIPQ13075 1403 aa24.74■■□□□ 1.55
SRRM3-204ENST00000611745 HFM1A2PYH4 1435 aa24.73■■□□□ 1.55
SRRM3-204ENST00000611745 MYBBP1AQ9BQG0 1328 aaKnown RBP24.72■■□□□ 1.55
SRRM3-204ENST00000611745 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
SRRM3-204ENST00000611745 NLRP13Q86W25 1043 aa24.7■■□□□ 1.54
SRRM3-204ENST00000611745 CENPQQ7L2Z9 268 aaPredicted RBP24.7■■□□□ 1.54
SRRM3-204ENST00000611745 PKD2Q13563 968 aa24.68■■□□□ 1.54
SRRM3-204ENST00000611745 RALBP1Q15311 655 aa24.68■■□□□ 1.54
SRRM3-204ENST00000611745 PDE3BQ13370 1112 aa24.67■■□□□ 1.54
SRRM3-204ENST00000611745 ZNF644Q9H582 1327 aaPredicted RBP24.64■■□□□ 1.53
SRRM3-204ENST00000611745 NEUROD2Q15784 382 aa24.64■■□□□ 1.53
SRRM3-204ENST00000611745 KIF15Q9NS87 1388 aa24.63■■□□□ 1.53
SRRM3-204ENST00000611745 PANK2Q9BZ23 570 aa24.63■■□□□ 1.53
SRRM3-204ENST00000611745 KTN1Q86UP2 1357 aaKnown RBP24.61■■□□□ 1.53
SRRM3-204ENST00000611745 MYH16Q9H6N6 1097 aa24.61■■□□□ 1.53
SRRM3-204ENST00000611745 CCDC146Q8IYE0 955 aa24.6■■□□□ 1.53
SRRM3-204ENST00000611745 PCF11O94913 1555 aaKnown RBP24.59■■□□□ 1.53
SRRM3-204ENST00000611745 A0A0U1RQG5 324 aaPredicted RBP24.59■■□□□ 1.53
SRRM3-204ENST00000611745 CFTRP13569 1480 aa24.58■■□□□ 1.53
SRRM3-204ENST00000611745 ZBTB7CA1YPR0 619 aa24.58■■□□□ 1.53
SRRM3-204ENST00000611745 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
SRRM3-204ENST00000611745 MAP3K1Q13233 1512 aa24.57■■□□□ 1.52
SRRM3-204ENST00000611745 NCOA2Q15596 1464 aa24.57■■□□□ 1.52
SRRM3-204ENST00000611745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.56■■□□□ 1.52
SRRM3-204ENST00000611745 C8orf34Q49A92 452 aa24.55■■□□□ 1.52
SRRM3-204ENST00000611745 MYOM3Q5VTT5 1437 aa24.55■■□□□ 1.52
SRRM3-204ENST00000611745 ANP32BQ92688 251 aaKnown RBP24.54■■□□□ 1.52
SRRM3-204ENST00000611745 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
SRRM3-204ENST00000611745 PODXL2Q9NZ53 605 aa24.53■■□□□ 1.52
SRRM3-204ENST00000611745 RAD54L2Q9Y4B4 1467 aa24.52■■□□□ 1.52
SRRM3-204ENST00000611745 CASKIN1Q8WXD9 1431 aa24.51■■□□□ 1.51
SRRM3-204ENST00000611745 ADAMTS8Q9UP79 889 aa24.5■■□□□ 1.51
SRRM3-204ENST00000611745 XRCC6P12956 609 aaKnown RBP eCLIP24.5■■□□□ 1.51
SRRM3-204ENST00000611745 COG6Q9Y2V7 657 aa24.5■■□□□ 1.51
SRRM3-204ENST00000611745 CFDP1Q9UEE9 299 aaPredicted RBP24.5■■□□□ 1.51
SRRM3-204ENST00000611745 DHX29Q7Z478 1369 aaKnown RBP24.5■■□□□ 1.51
SRRM3-204ENST00000611745 GOLGA2Q08379 1002 aa24.49■■□□□ 1.51
SRRM3-204ENST00000611745 FOXD4L1Q9NU39 408 aa24.49■■□□□ 1.51
SRRM3-204ENST00000611745 BRD4O60885 1362 aaPredicted RBP24.49■■□□□ 1.51
SRRM3-204ENST00000611745 MFAP1P55081 439 aaKnown RBP24.48■■□□□ 1.51
SRRM3-204ENST00000611745 CLUAP1Q96AJ1 413 aa24.48■■□□□ 1.51
SRRM3-204ENST00000611745 PANK3Q9H999 370 aa24.48■■□□□ 1.51
SRRM3-204ENST00000611745 PTPN23Q9H3S7 1636 aa24.48■■□□□ 1.51
SRRM3-204ENST00000611745 RBM10P98175 930 aaKnown RBP24.47■■□□□ 1.51
SRRM3-204ENST00000611745 SEC24BO95487 1268 aa24.47■■□□□ 1.51
SRRM3-204ENST00000611745 NCLP19338 710 aaKnown RBP24.47■■□□□ 1.51
SRRM3-204ENST00000611745 RRP9O43818 475 aaKnown RBP24.46■■□□□ 1.51
SRRM3-204ENST00000611745 BCAR3O75815 825 aa24.46■■□□□ 1.51
SRRM3-204ENST00000611745 FBLN2P98095 1184 aa24.45■■□□□ 1.5
SRRM3-204ENST00000611745 KNSTRNQ9Y448 316 aa24.44■■□□□ 1.5
SRRM3-204ENST00000611745 BICRAQ9NZM4 1560 aa24.44■■□□□ 1.5
SRRM3-204ENST00000611745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.43■■□□□ 1.5
SRRM3-204ENST00000611745 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
SRRM3-204ENST00000611745 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
SRRM3-204ENST00000611745 TRAK2O60296 914 aa24.42■■□□□ 1.5
SRRM3-204ENST00000611745 ROCK2O75116 1388 aaKnown RBP24.42■■□□□ 1.5
SRRM3-204ENST00000611745 FAM13BQ9NYF5 915 aa24.42■■□□□ 1.5
SRRM3-204ENST00000611745 PANK1Q8TE04 598 aa24.42■■□□□ 1.5
SRRM3-204ENST00000611745 FYCO1Q9BQS8 1478 aa24.41■■□□□ 1.5
SRRM3-204ENST00000611745 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms