RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 PHLDB1Q86UU1 1377 aa4.93□□□□□ -1.62
RNF38-210ENST00000611646 ATAD2BQ9ULI0 1458 aa4.93□□□□□ -1.62
RNF38-210ENST00000611646 ST20-MTHFSA0A0A6YYL1 179 aa4.93□□□□□ -1.62
RNF38-210ENST00000611646 KIF21BO75037 1637 aa4.93□□□□□ -1.62
RNF38-210ENST00000611646 GZF1Q9H116 711 aaPredicted RBP4.93□□□□□ -1.62
RNF38-210ENST00000611646 STK26Q9P289 416 aa4.93□□□□□ -1.62
RNF38-210ENST00000611646 NUDCQ9Y266 331 aa4.93□□□□□ -1.62
RNF38-210ENST00000611646 ZNF644Q9H582 1327 aaPredicted RBP4.93□□□□□ -1.62
RNF38-210ENST00000611646 EXOC6Q8TAG9 804 aa4.93□□□□□ -1.62
RNF38-210ENST00000611646 MYH16Q9H6N6 1097 aa4.93□□□□□ -1.62
RNF38-210ENST00000611646 PRKRIP1Q9H875 184 aaPredicted RBP4.93□□□□□ -1.62
RNF38-210ENST00000611646 CLUAP1Q96AJ1 413 aa4.93□□□□□ -1.62
RNF38-210ENST00000611646 FMN1Q68DA7 1419 aa4.92□□□□□ -1.62
RNF38-210ENST00000611646 APBB1O00213 710 aa4.92□□□□□ -1.62
RNF38-210ENST00000611646 TAOK2Q9UL54 1235 aa4.92□□□□□ -1.62
RNF38-210ENST00000611646 CFAP53Q96M91 514 aa4.92□□□□□ -1.62
RNF38-210ENST00000611646 KTN1Q86UP2 1357 aaKnown RBP4.92□□□□□ -1.62
RNF38-210ENST00000611646 RRP7AQ9Y3A4 280 aaKnown RBP4.92□□□□□ -1.62
RNF38-210ENST00000611646 ERCC6Q03468 1493 aa4.92□□□□□ -1.62
RNF38-210ENST00000611646 CCDC184Q52MB2 194 aa4.91□□□□□ -1.62
RNF38-210ENST00000611646 GGT6Q6P531 493 aa4.91□□□□□ -1.62
RNF38-210ENST00000611646 MAPK8IP3Q9UPT6 1336 aa4.91□□□□□ -1.62
RNF38-210ENST00000611646 NAP1L5Q96NT1 182 aaPredicted RBP4.91□□□□□ -1.62
RNF38-210ENST00000611646 IPO9Q96P70 1041 aaKnown RBP4.91□□□□□ -1.62
RNF38-210ENST00000611646 MLECQ14165 292 aa4.91□□□□□ -1.62
RNF38-210ENST00000611646 MORC1Q86VD1 984 aa4.91□□□□□ -1.62
RNF38-210ENST00000611646 TRIM44Q96DX7 344 aaPredicted RBP4.91□□□□□ -1.62
RNF38-210ENST00000611646 BCL2L13Q9BXK5 485 aa4.91□□□□□ -1.62
RNF38-210ENST00000611646 POGKQ9P215 609 aa4.91□□□□□ -1.62
RNF38-210ENST00000611646 CDCA8Q53HL2 280 aa4.91□□□□□ -1.62
RNF38-210ENST00000611646 CCDC18Q5T9S5 1454 aa4.9□□□□□ -1.62
RNF38-210ENST00000611646 RAD54L2Q9Y4B4 1467 aa4.9□□□□□ -1.62
RNF38-210ENST00000611646 PIAS4Q8N2W9 510 aaPredicted RBP4.9□□□□□ -1.62
RNF38-210ENST00000611646 ARAP1Q96P48 1450 aa4.9□□□□□ -1.62
RNF38-210ENST00000611646 SRPK2P78362 688 aaKnown RBP4.9□□□□□ -1.62
RNF38-210ENST00000611646 IGF1RP08069 1367 aa4.9□□□□□ -1.63
RNF38-210ENST00000611646 WASHC2AQ641Q2 1341 aa4.9□□□□□ -1.63
RNF38-210ENST00000611646 A0A0G2JS52 829 aa4.9□□□□□ -1.63
RNF38-210ENST00000611646 PANK3Q9H999 370 aa4.9□□□□□ -1.63
RNF38-210ENST00000611646 FOXD4L1Q9NU39 408 aa4.9□□□□□ -1.63
RNF38-210ENST00000611646 CADPSQ9ULU8 1353 aa4.89□□□□□ -1.63
RNF38-210ENST00000611646 SYNJ1O43426 1573 aa4.89□□□□□ -1.63
RNF38-210ENST00000611646 HSP90AB1P08238 724 aaKnown RBP4.89□□□□□ -1.63
RNF38-210ENST00000611646 CRBNQ96SW2 442 aa4.89□□□□□ -1.63
RNF38-210ENST00000611646 U2AF1L5P0DN76 240 aaPredicted RBP4.89□□□□□ -1.63
RNF38-210ENST00000611646 PLCB2Q00722 1185 aa4.89□□□□□ -1.63
RNF38-210ENST00000611646 U2AF1Q01081 240 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNF38-210ENST00000611646 ARID3AQ99856 593 aa4.89□□□□□ -1.63
RNF38-210ENST00000611646 KIF7Q2M1P5 1343 aa4.88□□□□□ -1.63
RNF38-210ENST00000611646 MFAP1P55081 439 aaKnown RBP4.88□□□□□ -1.63
RNF38-210ENST00000611646 RALBP1Q15311 655 aa4.88□□□□□ -1.63
RNF38-210ENST00000611646 PDE4AP27815 886 aa4.88□□□□□ -1.63
RNF38-210ENST00000611646 ITPRIPQ8IWB1 547 aa4.88□□□□□ -1.63
RNF38-210ENST00000611646 USP47Q96K76 1375 aa4.88□□□□□ -1.63
RNF38-210ENST00000611646 TCERG1O14776 1098 aaKnown RBP4.87□□□□□ -1.63
RNF38-210ENST00000611646 LMOD2Q6P5Q4 547 aa4.87□□□□□ -1.63
RNF38-210ENST00000611646 RRP1P56182 461 aaKnown RBP4.87□□□□□ -1.63
RNF38-210ENST00000611646 ANKRD30AQ9BXX3 1397 aa4.87□□□□□ -1.63
RNF38-210ENST00000611646 NLRP13Q86W25 1043 aa4.87□□□□□ -1.63
RNF38-210ENST00000611646 CDCA7LQ96GN5 454 aa4.87□□□□□ -1.63
RNF38-210ENST00000611646 ZBED9Q6R2W3 1325 aa4.87□□□□□ -1.63
RNF38-210ENST00000611646 FGD5Q6ZNL6 1462 aa4.87□□□□□ -1.63
RNF38-210ENST00000611646 GOLGA2Q08379 1002 aa4.87□□□□□ -1.63
RNF38-210ENST00000611646 TRAK1Q9UPV9 953 aa4.87□□□□□ -1.63
RNF38-210ENST00000611646 KIF3BO15066 747 aa4.86□□□□□ -1.63
RNF38-210ENST00000611646 PTMAP06454 111 aaKnown RBP4.86□□□□□ -1.63
RNF38-210ENST00000611646 SKAP1Q86WV1 359 aa4.86□□□□□ -1.63
RNF38-210ENST00000611646 NUTM2FA1L443 756 aa4.86□□□□□ -1.63
RNF38-210ENST00000611646 GOLGA6L22H0YM25 854 aa4.86□□□□□ -1.63
RNF38-210ENST00000611646 MYBBP1AQ9BQG0 1328 aaKnown RBP4.86□□□□□ -1.63
RNF38-210ENST00000611646 LRRC9Q6ZRR7 1453 aa4.86□□□□□ -1.63
RNF38-210ENST00000611646 PAK3O75914 559 aaPredicted RBP4.86□□□□□ -1.63
RNF38-210ENST00000611646 GLIPR1L2Q4G1C9 344 aa4.86□□□□□ -1.63
RNF38-210ENST00000611646 FANCD2Q9BXW9 1451 aa4.86□□□□□ -1.63
RNF38-210ENST00000611646 FGD6Q6ZV73 1430 aa4.86□□□□□ -1.63
RNF38-210ENST00000611646 ELL2O00472 640 aaPredicted RBP4.86□□□□□ -1.63
RNF38-210ENST00000611646 DNTTIP2Q5QJE6 756 aaKnown RBP4.86□□□□□ -1.63
RNF38-210ENST00000611646 HSCBQ8IWL3 235 aa4.86□□□□□ -1.63
RNF38-210ENST00000611646 AKNAQ7Z591 1439 aa4.85□□□□□ -1.63
RNF38-210ENST00000611646 NBPF8Q3BBV2 869 aa4.85□□□□□ -1.63
RNF38-210ENST00000611646 ERICH6BQ5W0A0 696 aa4.85□□□□□ -1.63
RNF38-210ENST00000611646 COG6Q9Y2V7 657 aa4.85□□□□□ -1.63
RNF38-210ENST00000611646 CCDC7Q96M83 1385 aa4.85□□□□□ -1.63
RNF38-210ENST00000611646 WDR97A6NE52 1622 aa4.85□□□□□ -1.63
RNF38-210ENST00000611646 PDS5BQ9NTI5 1447 aa4.85□□□□□ -1.63
RNF38-210ENST00000611646 APAF1O14727 1248 aa4.85□□□□□ -1.63
RNF38-210ENST00000611646 KIF15Q9NS87 1388 aa4.85□□□□□ -1.63
RNF38-210ENST00000611646 NOL8Q76FK4 1167 aaKnown RBP4.85□□□□□ -1.63
RNF38-210ENST00000611646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.85□□□□□ -1.63
RNF38-210ENST00000611646 SMC4Q9NTJ3 1288 aa4.85□□□□□ -1.63
RNF38-210ENST00000611646 FOXD4L5Q5VV16 416 aaPredicted RBP4.84□□□□□ -1.63
RNF38-210ENST00000611646 FOXD4L4Q8WXT5 416 aaPredicted RBP4.84□□□□□ -1.63
RNF38-210ENST00000611646 JPH4Q96JJ6 628 aa4.84□□□□□ -1.63
RNF38-210ENST00000611646 NCBP3Q53F19 620 aaKnown RBP4.84□□□□□ -1.63
RNF38-210ENST00000611646 PEG3Q9GZU2 1588 aa4.84□□□□□ -1.63
RNF38-210ENST00000611646 CENPJQ9HC77 1338 aaPredicted RBP4.83□□□□□ -1.64
RNF38-210ENST00000611646 FANCIQ9NVI1 1328 aa4.83□□□□□ -1.64
RNF38-210ENST00000611646 CASC1Q6TDU7 716 aa4.83□□□□□ -1.64
RNF38-210ENST00000611646 CFTRP13569 1480 aa4.83□□□□□ -1.64
RNF38-210ENST00000611646 C11orf95C9JLR9 678 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms